RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 PCDHB3Q9Y5E6 796 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 A0A0G2JMP0 313 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 J3KR12 359 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 SLC1A7O00341 560 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 MMP20O60882 483 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 TSPAN15O95858 294 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 ART1P52961 327 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 PIGFQ07326 219 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 PMS2P3Q13401 168 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 INAVAQ3KP66 663 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 TIGD5Q53EQ6 642 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 RBM12BQ8IXT5 1001 aaKnown RBP9.22□□□□□ -0.93
CSMD1-217ENST00000602723 OR4M2Q8NGB6 313 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 STK35Q8TDR2 534 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 ASF1BQ9NVP2 202 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 ZNF850A8MQ14 1090 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 DENRO43583 198 aaKnown RBP9.22□□□□□ -0.93
CSMD1-217ENST00000602723 ACVR1BP36896 505 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 ZNF678Q5SXM1 525 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 OR7G2Q8NG99 324 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 LGALS12Q96DT0 336 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 LIN37Q96GY3 246 aaPredicted RBP9.22□□□□□ -0.93
CSMD1-217ENST00000602723 SOX17Q9H6I2 414 aaPredicted RBP9.22□□□□□ -0.93
CSMD1-217ENST00000602723 C19orf25Q9UFG5 118 aaPredicted RBP9.22□□□□□ -0.93
CSMD1-217ENST00000602723 TMPRSS11EQ9UL52 423 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 PSAT1Q9Y617 370 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 DOCK10Q96BY6 2186 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 FER1L5A0AVI2 2057 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 NPIPA2E9PIF3 369 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 NPIPA3F8WFD2 350 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 BRINP1O60477 761 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 POP7O75817 140 aaKnown RBP9.22□□□□□ -0.93
CSMD1-217ENST00000602723 SELENOVP59797 346 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 NPRL3Q12980 569 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 CRHR2Q13324 411 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 TXNRD3NBQ6F5E7 133 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 ZNF529Q6P280 563 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 SUSD1Q6UWL2 747 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 PXKQ7Z7A4 578 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 DTX3Q8N9I9 347 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 GAS2L1Q99501 681 aaPredicted RBP9.22□□□□□ -0.93
CSMD1-217ENST00000602723 FBXL12Q9NXK8 326 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 GIMAP2Q9UG22 337 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 CACNA1BQ00975 2339 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 CFIP05156 583 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 PIM1P11309 404 aaPredicted RBP9.22□□□□□ -0.93
CSMD1-217ENST00000602723 YARS2Q9Y2Z4 477 aaKnown RBP9.22□□□□□ -0.93
CSMD1-217ENST00000602723 KCTD3Q9Y597 815 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 PRKYO43930 277 aa9.21□□□□□ -0.93
CSMD1-217ENST00000602723 DIRAS3O95661 229 aa9.21□□□□□ -0.93
CSMD1-217ENST00000602723 RPS26P62854 115 aaKnown RBP9.21□□□□□ -0.93
CSMD1-217ENST00000602723 NTRK2Q16620 822 aa9.21□□□□□ -0.93
CSMD1-217ENST00000602723 FAM214AQ32MH5 1076 aa9.21□□□□□ -0.93
CSMD1-217ENST00000602723 ANKRD36CQ5JPF3 1778 aa9.21□□□□□ -0.93
CSMD1-217ENST00000602723 RGPD1P0DJD0 1748 aa9.21□□□□□ -0.93
CSMD1-217ENST00000602723 MRC1P22897 1456 aa9.21□□□□□ -0.93
CSMD1-217ENST00000602723 ARVCFO00192 962 aa9.21□□□□□ -0.93
CSMD1-217ENST00000602723 GOSR2O14653 212 aa9.21□□□□□ -0.93
CSMD1-217ENST00000602723 AKR1C4P17516 323 aa9.21□□□□□ -0.93
CSMD1-217ENST00000602723 CD9P21926 228 aa9.21□□□□□ -0.93
CSMD1-217ENST00000602723 RAB41Q5JT25 222 aa9.21□□□□□ -0.93
CSMD1-217ENST00000602723 ZNF776Q68DI1 518 aaPredicted RBP9.21□□□□□ -0.93
CSMD1-217ENST00000602723 ENPP6Q6UWR7 440 aa9.21□□□□□ -0.93
CSMD1-217ENST00000602723 GSG1LQ6UXU4 331 aa9.21□□□□□ -0.93
CSMD1-217ENST00000602723 TSPEARQ8WU66 669 aa9.21□□□□□ -0.93
CSMD1-217ENST00000602723 DEDD2Q8WXF8 326 aa9.21□□□□□ -0.93
CSMD1-217ENST00000602723 KLRG1Q96E93 195 aa9.21□□□□□ -0.93
CSMD1-217ENST00000602723 OR8D2Q9GZM6 311 aa9.21□□□□□ -0.93
CSMD1-217ENST00000602723 ZFR2Q9UPR6 939 aaKnown RBP9.21□□□□□ -0.93
CSMD1-217ENST00000602723 MAGED1Q9Y5V3 778 aaPredicted RBP9.21□□□□□ -0.93
CSMD1-217ENST00000602723 PAHP00439 452 aa9.21□□□□□ -0.93
CSMD1-217ENST00000602723 RORAP35398 523 aa9.21□□□□□ -0.93
CSMD1-217ENST00000602723 CFAP77Q6ZQR2 320 aa9.21□□□□□ -0.93
CSMD1-217ENST00000602723 IGDCC3Q8IVU1 814 aa9.21□□□□□ -0.93
CSMD1-217ENST00000602723 LRFN1Q9P244 771 aa9.21□□□□□ -0.93
CSMD1-217ENST00000602723 DICER1Q9UPY3 1922 aaKnown RBP9.21□□□□□ -0.93
CSMD1-217ENST00000602723 PIK3C2AO00443 1686 aa9.21□□□□□ -0.94
CSMD1-217ENST00000602723 SCGB2A1O75556 95 aa9.21□□□□□ -0.94
CSMD1-217ENST00000602723 FGF3P11487 239 aaPredicted RBP9.21□□□□□ -0.94
CSMD1-217ENST00000602723 PRKCAP17252 672 aa9.21□□□□□ -0.94
CSMD1-217ENST00000602723 FECHP22830 423 aa9.21□□□□□ -0.94
CSMD1-217ENST00000602723 AK4P27144 223 aaPredicted RBP9.21□□□□□ -0.94
CSMD1-217ENST00000602723 ARL11Q969Q4 196 aa9.21□□□□□ -0.94
CSMD1-217ENST00000602723 ACSL6Q9UKU0 697 aa9.21□□□□□ -0.94
CSMD1-217ENST00000602723 H2BFMP0C1H6 154 aa9.21□□□□□ -0.94
CSMD1-217ENST00000602723 MYF6P23409 242 aa9.21□□□□□ -0.94
CSMD1-217ENST00000602723 CD34P28906 385 aa9.21□□□□□ -0.94
CSMD1-217ENST00000602723 ZNF767PQ75MW2 155 aa9.21□□□□□ -0.94
CSMD1-217ENST00000602723 FUNDC2Q9BWH2 189 aa9.21□□□□□ -0.94
CSMD1-217ENST00000602723 MAGIXQ9H6Y5 334 aa9.21□□□□□ -0.94
CSMD1-217ENST00000602723 ZNF696Q9H7X3 374 aa9.21□□□□□ -0.94
CSMD1-217ENST00000602723 WNK2Q9Y3S1 2297 aa9.21□□□□□ -0.94
CSMD1-217ENST00000602723 A0A1W2PRU2 124 aa9.21□□□□□ -0.94
CSMD1-217ENST00000602723 SOCS2O14508 198 aa9.21□□□□□ -0.94
CSMD1-217ENST00000602723 FMO6PO60774 539 aa9.21□□□□□ -0.94
CSMD1-217ENST00000602723 BEST1O76090 585 aa9.21□□□□□ -0.94
CSMD1-217ENST00000602723 KCNC1P48547 511 aa9.21□□□□□ -0.94
CSMD1-217ENST00000602723 ARHGAP11AQ6P4F7 1023 aa9.21□□□□□ -0.94
CSMD1-217ENST00000602723 TMEM205Q6UW68 189 aa9.21□□□□□ -0.94
CSMD1-217ENST00000602723 OR5T1Q8NG75 326 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms