RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 NMNAT1Q9HAN9 279 aaPredicted RBP8.46□□□□□ -1.05
COMMD3-215ENST00000602574 ADAP2Q9NPF8 381 aa8.46□□□□□ -1.05
COMMD3-215ENST00000602574 ACSS1Q9NUB1 689 aaPredicted RBP8.46□□□□□ -1.05
COMMD3-215ENST00000602574 NLE1Q9NVX2 485 aaPredicted RBP8.46□□□□□ -1.05
COMMD3-215ENST00000602574 SLCO1C1Q9NYB5 712 aa8.46□□□□□ -1.05
COMMD3-215ENST00000602574 NDRG4Q9ULP0 352 aaKnown RBP8.46□□□□□ -1.05
COMMD3-215ENST00000602574 AURKCQ9UQB9 309 aa8.46□□□□□ -1.05
COMMD3-215ENST00000602574 PHIPQ8WWQ0 1821 aa8.46□□□□□ -1.05
COMMD3-215ENST00000602574 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.46□□□□□ -1.06
COMMD3-215ENST00000602574 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.46□□□□□ -1.06
COMMD3-215ENST00000602574 TCRBV9S1A1TA0A576 114 aa8.46□□□□□ -1.06
COMMD3-215ENST00000602574 CXorf65A6NEN9 183 aa8.46□□□□□ -1.06
COMMD3-215ENST00000602574 A6NIZ1 184 aa8.46□□□□□ -1.06
COMMD3-215ENST00000602574 DRGXA6NNA5 263 aa8.46□□□□□ -1.06
COMMD3-215ENST00000602574 MSH4O15457 936 aa8.46□□□□□ -1.06
COMMD3-215ENST00000602574 XPNPEP2O43895 674 aa8.46□□□□□ -1.06
COMMD3-215ENST00000602574 CTAG2O75638 210 aa8.46□□□□□ -1.06
COMMD3-215ENST00000602574 SC5DO75845 299 aa8.46□□□□□ -1.06
COMMD3-215ENST00000602574 SERPINA3P01011 423 aa8.46□□□□□ -1.06
COMMD3-215ENST00000602574 C1QAP02745 245 aa8.46□□□□□ -1.06
COMMD3-215ENST00000602574 MT-ND2P03891 347 aa8.46□□□□□ -1.06
COMMD3-215ENST00000602574 ZSCAN5DPP0CG00 497 aa8.46□□□□□ -1.06
COMMD3-215ENST00000602574 GAAP10253 952 aa8.46□□□□□ -1.06
COMMD3-215ENST00000602574 GADD45AP24522 165 aa8.46□□□□□ -1.06
COMMD3-215ENST00000602574 PRKCHP24723 683 aa8.46□□□□□ -1.06
COMMD3-215ENST00000602574 ARSEP51690 589 aa8.46□□□□□ -1.06
COMMD3-215ENST00000602574 ARF5P84085 180 aa8.46□□□□□ -1.06
COMMD3-215ENST00000602574 PIGFQ07326 219 aa8.46□□□□□ -1.06
COMMD3-215ENST00000602574 IFRD2Q12894 506 aaPredicted RBP8.46□□□□□ -1.06
COMMD3-215ENST00000602574 SKP2Q13309 424 aa8.46□□□□□ -1.06
COMMD3-215ENST00000602574 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.46□□□□□ -1.06
COMMD3-215ENST00000602574 CRTC2Q53ET0 693 aaPredicted RBP8.46□□□□□ -1.06
COMMD3-215ENST00000602574 ULK3Q6PHR2 472 aa8.46□□□□□ -1.06
COMMD3-215ENST00000602574 TMCO2Q7Z6W1 182 aaPredicted RBP8.46□□□□□ -1.06
COMMD3-215ENST00000602574 RANBP3LQ86VV4 465 aaPredicted RBP8.46□□□□□ -1.06
COMMD3-215ENST00000602574 ZFP82Q8N141 532 aa8.46□□□□□ -1.06
COMMD3-215ENST00000602574 PQLC3Q8N755 202 aa8.46□□□□□ -1.06
COMMD3-215ENST00000602574 AGBL5Q8NDL9 886 aa8.46□□□□□ -1.06
COMMD3-215ENST00000602574 ZNF564Q8TBZ8 553 aaPredicted RBP8.46□□□□□ -1.06
COMMD3-215ENST00000602574 SCRN2Q96FV2 425 aa8.46□□□□□ -1.06
COMMD3-215ENST00000602574 TPD52L3Q96J77 140 aa8.46□□□□□ -1.06
COMMD3-215ENST00000602574 PIWIL1Q96J94 861 aaKnown RBP8.46□□□□□ -1.06
COMMD3-215ENST00000602574 WDR83Q9BRX9 315 aaKnown RBP8.46□□□□□ -1.06
COMMD3-215ENST00000602574 AMNQ9BXJ7 453 aa8.46□□□□□ -1.06
COMMD3-215ENST00000602574 HAPLN2Q9GZV7 340 aa8.46□□□□□ -1.06
COMMD3-215ENST00000602574 ZBTB3Q9H5J0 574 aa8.46□□□□□ -1.06
COMMD3-215ENST00000602574 ELP3Q9H9T3 547 aa8.46□□□□□ -1.06
COMMD3-215ENST00000602574 LATS2Q9NRM7 1088 aa8.46□□□□□ -1.06
COMMD3-215ENST00000602574 ABCB8Q9NUT2 735 aa8.46□□□□□ -1.06
COMMD3-215ENST00000602574 PDP1Q9P0J1 537 aaPredicted RBP8.46□□□□□ -1.06
COMMD3-215ENST00000602574 STOX2Q9P2F5 926 aaPredicted RBP8.46□□□□□ -1.06
COMMD3-215ENST00000602574 LOXHD1Q8IVV2 1947 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 FAM240BA0A1B0GVZ2 78 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 TCRBV5S2A0A599 114 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 SLC5A10A0PJK1 596 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 BBIP1A8MTZ0 92 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 SGK494L7N484 410 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 MBTPS2O43462 519 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 AQP8O94778 261 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 KDM4BO94953 1096 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 FGF19O95750 216 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 CYBBP04839 570 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 ZNF44P15621 663 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 AGXTP21549 392 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 NR2F2P24468 414 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 GRK5P34947 590 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 TGFBR1P36897 503 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 MAP2K4P45985 399 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 RORCP51449 518 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 CCR6P51684 374 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 TWF1Q12792 350 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 PDZK1IP1Q13113 114 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 PICALMQ13492 652 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 PEA15Q15121 130 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 PROX2Q3B8N5 592 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 ZNF468Q5VIY5 522 aaPredicted RBP8.45□□□□□ -1.06
COMMD3-215ENST00000602574 WSCD1Q658N2 575 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 METAP1DQ6UB28 335 aaPredicted RBP8.45□□□□□ -1.06
COMMD3-215ENST00000602574 ABI3BPQ7Z7G0 1075 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 THOC6Q86W42 341 aaKnown RBP8.45□□□□□ -1.06
COMMD3-215ENST00000602574 VRK3Q8IV63 474 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 OR5M9Q8NGP3 310 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.45□□□□□ -1.066e-6■■■□□ 15.1
COMMD3-215ENST00000602574 LRRC15Q8TF66 581 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 C16orf78Q8WTQ4 265 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 SPACA9Q96E40 222 aaPredicted RBP8.45□□□□□ -1.06
COMMD3-215ENST00000602574 MALSU1Q96EH3 234 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 TMEM209Q96SK2 561 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 HOPXQ9BPY8 73 aaPredicted RBP8.45□□□□□ -1.06
COMMD3-215ENST00000602574 CHCHD6Q9BRQ6 235 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 TMEM106CQ9BVX2 250 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 ADAM33Q9BZ11 813 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 CHST5Q9GZS9 411 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 TSPAN10Q9H1Z9 355 aaPredicted RBP8.45□□□□□ -1.06
COMMD3-215ENST00000602574 PPP1R3EQ9H7J1 279 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 LRP2BPQ9P2M1 347 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 ZNF490Q9ULM2 529 aaPredicted RBP8.45□□□□□ -1.06
COMMD3-215ENST00000602574 KCTD3Q9Y597 815 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 CDH10Q9Y6N8 788 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 PHLPP1O60346 1717 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms