RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 RAPGEFL1Q9UHV5 662 aa16.92■□□□□ 0.3
VRK3-225ENST00000601912 FAF1Q9UNN5 650 aaPredicted RBP16.92■□□□□ 0.3
VRK3-225ENST00000601912 MAU2Q9Y6X3 613 aa16.92■□□□□ 0.3
VRK3-225ENST00000601912 A0A1W2PS29 197 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 TCRBV3S1A0A5B6 114 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 CXCR6O00574 342 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 FGF17O60258 216 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 PRIM2P49643 509 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 MVDP53602 400 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 POLE2P56282 527 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 DUSP2Q05923 314 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 ZFP36L1Q07352 338 aaKnown RBP16.91■□□□□ 0.3
VRK3-225ENST00000601912 SLC13A2Q13183 592 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 TP53BP2Q13625 1128 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 VMACQ2NL98 169 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 MTX3Q5HYI7 312 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 PRAMEF17Q5VTA0 474 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 TMEM107Q6UX40 140 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 AGBL5Q8NDL9 886 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 OR56A1Q8NGH5 318 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 NCLNQ969V3 563 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 YIPF2Q9BWQ6 316 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 GPATCH2Q9NW75 528 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 ASCC3Q8N3C0 2202 aaKnown RBP16.91■□□□□ 0.3
VRK3-225ENST00000601912 C4orf47A7E2U8 309 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 EMC8O43402 210 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 B4GALT2O60909 372 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 CTNSO60931 367 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 BMP10O95393 424 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 FHP07954 510 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 XCR1P46094 333 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 OR1D4P47884 311 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 ID2Q02363 134 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 DSG2Q14126 1118 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 SYT16Q17RD7 645 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 COX20Q5RI15 118 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 GCNT6Q5T4J0 391 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 TMEM126BQ8IUX1 230 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 ZZZ3Q8IYH5 903 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 C11orf65Q8NCR3 313 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 FAM162AQ96A26 154 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 ANKRD9Q96BM1 317 aaPredicted RBP16.91■□□□□ 0.3
VRK3-225ENST00000601912 ELP4Q96EB1 424 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 MAGED4Q96JG8 741 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 RBCK1Q9BYM8 510 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 CHST8Q9H2A9 424 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 ZNF304Q9HCX3 659 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 PRTFDC1Q9NRG1 225 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 SIDT1Q9NXL6 827 aaKnown RBP16.91■□□□□ 0.3
VRK3-225ENST00000601912 ANGPTL2Q9UKU9 493 aa16.91■□□□□ 0.3
VRK3-225ENST00000601912 TMEM184BQ9Y519 407 aaPredicted RBP16.91■□□□□ 0.3
VRK3-225ENST00000601912 AGRPO00253 132 aa16.9■□□□□ 0.3
VRK3-225ENST00000601912 CBFA2T3O75081 653 aa16.9■□□□□ 0.3
VRK3-225ENST00000601912 SLITRK5O94991 958 aa16.9■□□□□ 0.3
VRK3-225ENST00000601912 BAG2O95816 211 aa16.9■□□□□ 0.3
VRK3-225ENST00000601912 ATP1B1P05026 303 aa16.9■□□□□ 0.3
VRK3-225ENST00000601912 UMPSP11172 480 aa16.9■□□□□ 0.3
VRK3-225ENST00000601912 ETFAP13804 333 aa16.9■□□□□ 0.3
VRK3-225ENST00000601912 FBLP22087 321 aaKnown RBP16.9■□□□□ 0.3
VRK3-225ENST00000601912 IL10P22301 178 aa16.9■□□□□ 0.3
VRK3-225ENST00000601912 PSMA4P25789 261 aaKnown RBP16.9■□□□□ 0.3
VRK3-225ENST00000601912 MAGEA8P43361 318 aa16.9■□□□□ 0.3
VRK3-225ENST00000601912 ANXA11P50995 505 aaKnown RBP16.9■□□□□ 0.3
VRK3-225ENST00000601912 CASP9P55211 416 aa16.9■□□□□ 0.3
VRK3-225ENST00000601912 HSD17B7P56937 341 aa16.9■□□□□ 0.3
VRK3-225ENST00000601912 E2F1Q01094 437 aa16.9■□□□□ 0.3
VRK3-225ENST00000601912 RBBP4Q09028 425 aa16.9■□□□□ 0.3
VRK3-225ENST00000601912 STX4Q12846 297 aa16.9■□□□□ 0.3
VRK3-225ENST00000601912 ILKQ13418 452 aa16.9■□□□□ 0.3
VRK3-225ENST00000601912 VEZF1Q14119 521 aa16.9■□□□□ 0.3
VRK3-225ENST00000601912 ADRM1Q16186 407 aa16.9■□□□□ 0.3
VRK3-225ENST00000601912 RHBDD2Q6NTF9 364 aa16.9■□□□□ 0.3
VRK3-225ENST00000601912 RBM44Q6ZP01 1051 aaKnown RBP16.9■□□□□ 0.3
VRK3-225ENST00000601912 PPP1R3BQ86XI6 285 aa16.9■□□□□ 0.3
VRK3-225ENST00000601912 PTOV1Q86YD1 416 aa16.9■□□□□ 0.3
VRK3-225ENST00000601912 POP5Q969H6 163 aaKnown RBP16.9■□□□□ 0.3
VRK3-225ENST00000601912 OR1F2PQ96R84 312 aa16.9■□□□□ 0.3
VRK3-225ENST00000601912 EFHD1Q9BUP0 239 aa16.9■□□□□ 0.3
VRK3-225ENST00000601912 TMEM121BQ9BXQ6 578 aaPredicted RBP16.9■□□□□ 0.3
VRK3-225ENST00000601912 THUMPD1Q9NXG2 353 aaKnown RBP16.9■□□□□ 0.3
VRK3-225ENST00000601912 NKX1-2Q9UD57 310 aaPredicted RBP16.9■□□□□ 0.3
VRK3-225ENST00000601912 HCN4Q9Y3Q4 1203 aa16.9■□□□□ 0.3
VRK3-225ENST00000601912 ADAMTS20P59510 1910 aa16.89■□□□□ 0.3
VRK3-225ENST00000601912 DMDP11532 3685 aa16.89■□□□□ 0.29
VRK3-225ENST00000601912 DHRS12A0PJE2 317 aa16.89■□□□□ 0.29
VRK3-225ENST00000601912 EFCAB7A8K855 629 aa16.89■□□□□ 0.29
VRK3-225ENST00000601912 FOXD2O60548 495 aaPredicted RBP16.89■□□□□ 0.29
VRK3-225ENST00000601912 TNFRSF21O75509 655 aa16.89■□□□□ 0.29
VRK3-225ENST00000601912 CREG1O75629 220 aa16.89■□□□□ 0.29
VRK3-225ENST00000601912 GPIP06744 558 aa16.89■□□□□ 0.29
VRK3-225ENST00000601912 HBQ1P09105 142 aa16.89■□□□□ 0.29
VRK3-225ENST00000601912 SLC35E2P0CK97 266 aa16.89■□□□□ 0.29
VRK3-225ENST00000601912 ANPEPP15144 967 aa16.89■□□□□ 0.29
VRK3-225ENST00000601912 MC3RP41968 323 aa16.89■□□□□ 0.29
VRK3-225ENST00000601912 PRKAG1P54619 331 aa16.89■□□□□ 0.29
VRK3-225ENST00000601912 DSTNP60981 165 aa16.89■□□□□ 0.29
VRK3-225ENST00000601912 SLC34A1Q06495 639 aa16.89■□□□□ 0.29
VRK3-225ENST00000601912 IL11RAQ14626 422 aa16.89■□□□□ 0.29
VRK3-225ENST00000601912 CEACAM20Q6UY09 585 aa16.89■□□□□ 0.29
VRK3-225ENST00000601912 B3GNT8Q7Z7M8 397 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms