RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 RAE1P78406 368 aaKnown RBP15.04■□□□□ -0
LSM4-206ENST00000600289 ID2Q02363 134 aa15.04■□□□□ -0
LSM4-206ENST00000600289 ACSM2AQ08AH3 577 aa15.04■□□□□ -0
LSM4-206ENST00000600289 ACSM2BQ68CK6 577 aa15.04■□□□□ -0
LSM4-206ENST00000600289 SLC48A1Q6P1K1 146 aa15.04■□□□□ -0
LSM4-206ENST00000600289 HSDL2Q6YN16 418 aa15.04■□□□□ -0
LSM4-206ENST00000600289 CISD2Q8N5K1 135 aaKnown RBP15.04■□□□□ -0
LSM4-206ENST00000600289 HORMAD2Q8N7B1 307 aa15.04■□□□□ -0
LSM4-206ENST00000600289 FAM76AQ8TAV0 307 aa15.04■□□□□ -0
LSM4-206ENST00000600289 TM4SF18Q96CE8 201 aa15.04■□□□□ -0
LSM4-206ENST00000600289 SHCBP1LQ9BZQ2 653 aa15.04■□□□□ -0
LSM4-206ENST00000600289 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.04■□□□□ -0
LSM4-206ENST00000600289 AGPAT4Q9NRZ5 378 aa15.04■□□□□ -0
LSM4-206ENST00000600289 COPS7AQ9UBW8 275 aa15.04■□□□□ -0
LSM4-206ENST00000600289 NTNG1Q9Y2I2 539 aa15.04■□□□□ -0
LSM4-206ENST00000600289 GLOD5A6NK44 160 aa15.03■□□□□ -0
LSM4-206ENST00000600289 AZIN1O14977 448 aa15.03■□□□□ -0
LSM4-206ENST00000600289 TM9SF1O15321 606 aa15.03■□□□□ -0
LSM4-206ENST00000600289 PCDH7O60245 1069 aa15.03■□□□□ -0
LSM4-206ENST00000600289 VPS4BO75351 444 aa15.03■□□□□ -0
LSM4-206ENST00000600289 CRCPO75575 148 aa15.03■□□□□ -0
LSM4-206ENST00000600289 NEURL1O76050 574 aa15.03■□□□□ -0
LSM4-206ENST00000600289 GNLYP22749 145 aa15.03■□□□□ -0
LSM4-206ENST00000600289 PIK3R1P27986 724 aa15.03■□□□□ -0
LSM4-206ENST00000600289 GRNP28799 593 aaKnown RBP15.03■□□□□ -0
LSM4-206ENST00000600289 HLCSP50747 726 aa15.03■□□□□ -0
LSM4-206ENST00000600289 HMGCS1Q01581 520 aa15.03■□□□□ -0
LSM4-206ENST00000600289 OR1C1Q15619 314 aa15.03■□□□□ -0
LSM4-206ENST00000600289 KANK2Q63ZY3 851 aa15.03■□□□□ -0
LSM4-206ENST00000600289 DGAT2L6Q6ZPD8 337 aa15.03■□□□□ -0
LSM4-206ENST00000600289 GPALPP1Q8IXQ4 340 aa15.03■□□□□ -0
LSM4-206ENST00000600289 OR4K14Q8NGD5 310 aa15.03■□□□□ -0
LSM4-206ENST00000600289 NUBPLQ8TB37 319 aa15.03■□□□□ -0
LSM4-206ENST00000600289 UCN3Q969E3 161 aa15.03■□□□□ -0
LSM4-206ENST00000600289 APIPQ96GX9 242 aa15.03■□□□□ -0
LSM4-206ENST00000600289 SIGLEC12Q96PQ1 595 aa15.03■□□□□ -0
LSM4-206ENST00000600289 MECRQ9BV79 373 aa15.03■□□□□ -0
LSM4-206ENST00000600289 FAIM2Q9BWQ8 316 aa15.03■□□□□ -0
LSM4-206ENST00000600289 OR8D2Q9GZM6 311 aa15.03■□□□□ -0
LSM4-206ENST00000600289 EML4Q9HC35 981 aaKnown RBP15.03■□□□□ -0
LSM4-206ENST00000600289 RRAGDQ9NQL2 400 aaPredicted RBP15.03■□□□□ -0
LSM4-206ENST00000600289 ASF1BQ9NVP2 202 aa15.03■□□□□ -0
LSM4-206ENST00000600289 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.03■□□□□ -0
LSM4-206ENST00000600289 VPS4AQ9UN37 437 aa15.03■□□□□ -0
LSM4-206ENST00000600289 YARS2Q9Y2Z4 477 aaKnown RBP15.03■□□□□ -0
LSM4-206ENST00000600289 CCL27Q9Y4X3 112 aa15.03■□□□□ -0
LSM4-206ENST00000600289 CROCCQ5TZA2 2017 aa15.03■□□□□ -0
LSM4-206ENST00000600289 HIVEP1P15822 2718 aa15.02■□□□□ -0
LSM4-206ENST00000600289 MYOCOSA0A1B0GUC4 107 aa15.02■□□□□ -0
LSM4-206ENST00000600289 WASHC1A8K0Z3 465 aa15.02■□□□□ -0
LSM4-206ENST00000600289 BIRC5O15392 142 aa15.02■□□□□ -0
LSM4-206ENST00000600289 PRKNO60260 465 aaPredicted RBP15.02■□□□□ -0
LSM4-206ENST00000600289 OR10H2O60403 315 aa15.02■□□□□ -0
LSM4-206ENST00000600289 ITGA10O75578 1167 aa15.02■□□□□ -0
LSM4-206ENST00000600289 CLDN1O95832 211 aa15.02■□□□□ -0
LSM4-206ENST00000600289 F10P00742 488 aa15.02■□□□□ -0
LSM4-206ENST00000600289 MYZAPP0CAP1 466 aa15.02■□□□□ -0
LSM4-206ENST00000600289 DHRS4L1P0CG22 281 aa15.02■□□□□ -0
LSM4-206ENST00000600289 CPMP14384 443 aa15.02■□□□□ -0
LSM4-206ENST00000600289 DRD2P14416 443 aa15.02■□□□□ -0
LSM4-206ENST00000600289 CD46P15529 392 aa15.02■□□□□ -0
LSM4-206ENST00000600289 CYB561P49447 251 aa15.02■□□□□ -0
LSM4-206ENST00000600289 RNF4P78317 190 aa15.02■□□□□ -0
LSM4-206ENST00000600289 ZNF766Q5HY98 468 aa15.02■□□□□ -0
LSM4-206ENST00000600289 ZNF227Q86WZ6 799 aa15.02■□□□□ -0
LSM4-206ENST00000600289 ZNF321PQ8N8H1 164 aa15.02■□□□□ -0
LSM4-206ENST00000600289 OR5L2Q8NGL0 311 aa15.02■□□□□ -0
LSM4-206ENST00000600289 GRHL3Q8TE85 626 aa15.02■□□□□ -0
LSM4-206ENST00000600289 RIT1Q92963 219 aa15.02■□□□□ -0
LSM4-206ENST00000600289 C19orf60Q96EN9 201 aa15.02■□□□□ -0
LSM4-206ENST00000600289 SENP5Q96HI0 755 aaPredicted RBP15.02■□□□□ -0
LSM4-206ENST00000600289 STMN4Q9H169 189 aaPredicted RBP15.02■□□□□ -0
LSM4-206ENST00000600289 LRFN1Q9P244 771 aa15.02■□□□□ -0
LSM4-206ENST00000600289 MYOTQ9UBF9 498 aa15.02■□□□□ -0
LSM4-206ENST00000600289 WBP11Q9Y2W2 641 aaKnown RBP15.02■□□□□ -0
LSM4-206ENST00000600289 DNHD1Q96M86 4753 aa15.02□□□□□ -0.01
LSM4-206ENST00000600289 GOLGA6L10A6NI86 522 aa15.01□□□□□ -0.01
LSM4-206ENST00000600289 OR6C76A6NM76 312 aa15.01□□□□□ -0.01
LSM4-206ENST00000600289 SLC28A1O00337 649 aa15.01□□□□□ -0.01
LSM4-206ENST00000600289 ZWINTO95229 277 aa15.01□□□□□ -0.01
LSM4-206ENST00000600289 ATP1B1P05026 303 aa15.01□□□□□ -0.01
LSM4-206ENST00000600289 NEFHP12036 1026 aa15.01□□□□□ -0.01
LSM4-206ENST00000600289 SERPINB3P29508 390 aa15.01□□□□□ -0.01
LSM4-206ENST00000600289 SERPINB4P48594 390 aa15.01□□□□□ -0.01
LSM4-206ENST00000600289 HK2P52789 917 aa15.01□□□□□ -0.01
LSM4-206ENST00000600289 HEPACAMQ14CZ8 416 aa15.01□□□□□ -0.01
LSM4-206ENST00000600289 IMPG1Q17R60 797 aa15.01□□□□□ -0.01
LSM4-206ENST00000600289 ARL13AQ5H913 290 aaPredicted RBP15.01□□□□□ -0.01
LSM4-206ENST00000600289 ZNF468Q5VIY5 522 aaPredicted RBP15.01□□□□□ -0.01
LSM4-206ENST00000600289 C1QL3Q5VWW1 255 aa15.01□□□□□ -0.01
LSM4-206ENST00000600289 ZNF324BQ6AW86 544 aaPredicted RBP15.01□□□□□ -0.01
LSM4-206ENST00000600289 CLEC6AQ6EIG7 209 aa15.01□□□□□ -0.01
LSM4-206ENST00000600289 SCIMPQ6UWF3 145 aa15.01□□□□□ -0.01
LSM4-206ENST00000600289 FAM180AQ6UWF9 173 aa15.01□□□□□ -0.01
LSM4-206ENST00000600289 MAMDC2Q7Z304 686 aaPredicted RBP15.01□□□□□ -0.01
LSM4-206ENST00000600289 BCORP1Q8N888 145 aa15.01□□□□□ -0.01
LSM4-206ENST00000600289 TMEM178AQ8NBL3 297 aa15.01□□□□□ -0.01
LSM4-206ENST00000600289 DNAJB8Q8NHS0 232 aa15.01□□□□□ -0.01
LSM4-206ENST00000600289 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.01□□□□□ -0.01
LSM4-206ENST00000600289 FAR1Q8WVX9 515 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms