RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 TIMP3P35625 211 aa15.79■□□□□ 0.12
SMG9-210ENST00000600097 BUD31P41223 144 aaPredicted RBP15.79■□□□□ 0.12
SMG9-210ENST00000600097 RAP1GDS1P52306 607 aa15.79■□□□□ 0.12
SMG9-210ENST00000600097 ARFIP1P53367 373 aa15.79■□□□□ 0.12
SMG9-210ENST00000600097 TNFRSF17Q02223 184 aa15.79■□□□□ 0.12
SMG9-210ENST00000600097 FOXD4Q12950 439 aaPredicted RBP15.79■□□□□ 0.12
SMG9-210ENST00000600097 DAZAP2Q15038 168 aaPredicted RBP15.79■□□□□ 0.12
SMG9-210ENST00000600097 NTRK2Q16620 822 aa15.79■□□□□ 0.12
SMG9-210ENST00000600097 SPRED3Q2MJR0 410 aa15.79■□□□□ 0.12
SMG9-210ENST00000600097 ACSF3Q4G176 576 aaPredicted RBP15.79■□□□□ 0.12
SMG9-210ENST00000600097 TMEM198Q66K66 360 aa15.79■□□□□ 0.12
SMG9-210ENST00000600097 RNF111Q6ZNA4 994 aa15.79■□□□□ 0.12
SMG9-210ENST00000600097 DGAT2L6Q6ZPD8 337 aa15.79■□□□□ 0.12
SMG9-210ENST00000600097 LACC1Q8IV20 430 aa15.79■□□□□ 0.12
SMG9-210ENST00000600097 PM20D2Q8IYS1 436 aa15.79■□□□□ 0.12
SMG9-210ENST00000600097 TAGAPQ8N103 731 aa15.79■□□□□ 0.12
SMG9-210ENST00000600097 C17orf53Q8N3J3 647 aaPredicted RBP15.79■□□□□ 0.12
SMG9-210ENST00000600097 ZCCHC7Q8N3Z6 543 aaKnown RBP15.79■□□□□ 0.12
SMG9-210ENST00000600097 STAG3L4Q8TBR4 150 aa15.79■□□□□ 0.12
SMG9-210ENST00000600097 RGMAQ96B86 450 aa15.79■□□□□ 0.12
SMG9-210ENST00000600097 ZNF597Q96LX8 424 aa15.79■□□□□ 0.12
SMG9-210ENST00000600097 GAL3ST4Q96RP7 486 aa15.79■□□□□ 0.12
SMG9-210ENST00000600097 GPR22Q99680 433 aa15.79■□□□□ 0.12
SMG9-210ENST00000600097 CPNE1Q99829 537 aa15.79■□□□□ 0.12
SMG9-210ENST00000600097 TRIM31Q9BZY9 425 aa15.79■□□□□ 0.12
SMG9-210ENST00000600097 WWTR1Q9GZV5 400 aa15.79■□□□□ 0.12
SMG9-210ENST00000600097 OR51B5Q9H339 312 aa15.79■□□□□ 0.12
SMG9-210ENST00000600097 CNOT11Q9UKZ1 510 aaKnown RBP15.79■□□□□ 0.12
SMG9-210ENST00000600097 ABCA2Q9BZC7 2435 aa15.79■□□□□ 0.12
SMG9-210ENST00000600097 C15orf38-AP3S2A0A0A6YYH1 394 aa15.78■□□□□ 0.12
SMG9-210ENST00000600097 EFCAB8A8MWE9 144 aa15.78■□□□□ 0.12
SMG9-210ENST00000600097 CAPN14A8MX76 684 aa15.78■□□□□ 0.12
SMG9-210ENST00000600097 TP53I11O14683 189 aa15.78■□□□□ 0.12
SMG9-210ENST00000600097 OR10H2O60403 315 aa15.78■□□□□ 0.12
SMG9-210ENST00000600097 PIAS1O75925 651 aa15.78■□□□□ 0.12
SMG9-210ENST00000600097 IL2RAP01589 272 aa15.78■□□□□ 0.12
SMG9-210ENST00000600097 GDF1P27539 372 aa15.78■□□□□ 0.12
SMG9-210ENST00000600097 RPL21P46778 160 aaKnown RBP15.78■□□□□ 0.12
SMG9-210ENST00000600097 TRPC1P48995 793 aa15.78■□□□□ 0.12
SMG9-210ENST00000600097 HERVK_113P63132 956 aa15.78■□□□□ 0.12
SMG9-210ENST00000600097 ERVK-8P63133 956 aa15.78■□□□□ 0.12
SMG9-210ENST00000600097 DUSP8Q13202 625 aa15.78■□□□□ 0.12
SMG9-210ENST00000600097 ZNF267Q14586 743 aaPredicted RBP15.78■□□□□ 0.12
SMG9-210ENST00000600097 ZKSCAN8Q15776 578 aaPredicted RBP15.78■□□□□ 0.12
SMG9-210ENST00000600097 CAPN12Q6ZSI9 719 aa15.78■□□□□ 0.12
SMG9-210ENST00000600097 KIF18BQ86Y91 864 aa15.78■□□□□ 0.12
SMG9-210ENST00000600097 CREG2Q8IUH2 290 aa15.78■□□□□ 0.12
SMG9-210ENST00000600097 NAXEQ8NCW5 288 aa15.78■□□□□ 0.12
SMG9-210ENST00000600097 TNIP2Q8NFZ5 429 aa15.78■□□□□ 0.12
SMG9-210ENST00000600097 PYROXD1Q8WU10 500 aa15.78■□□□□ 0.12
SMG9-210ENST00000600097 EXT2Q93063 718 aa15.78■□□□□ 0.12
SMG9-210ENST00000600097 HSPBAP1Q96EW2 488 aa15.78■□□□□ 0.12
SMG9-210ENST00000600097 RBBP8Q99708 897 aa15.78■□□□□ 0.12
SMG9-210ENST00000600097 ERVK-6Q9BXR3 956 aa15.78■□□□□ 0.12
SMG9-210ENST00000600097 DMRT3Q9NQL9 472 aa15.78■□□□□ 0.12
SMG9-210ENST00000600097 DLL4Q9NR61 685 aa15.78■□□□□ 0.12
SMG9-210ENST00000600097 NUDT4Q9NZJ9 180 aa15.78■□□□□ 0.12
SMG9-210ENST00000600097 OPTCQ9UBM4 332 aa15.78■□□□□ 0.12
SMG9-210ENST00000600097 CBLCQ9ULV8 474 aa15.78■□□□□ 0.12
SMG9-210ENST00000600097 ERVK-19Q9WJR5 959 aa15.78■□□□□ 0.12
SMG9-210ENST00000600097 CCDC188H7C350 402 aa15.77■□□□□ 0.12
SMG9-210ENST00000600097 K7EPI3 171 aa15.77■□□□□ 0.12
SMG9-210ENST00000600097 TRIM3O75382 744 aaPredicted RBP15.77■□□□□ 0.12
SMG9-210ENST00000600097 GPR75O95800 540 aa15.77■□□□□ 0.12
SMG9-210ENST00000600097 GALNSP34059 522 aa15.77■□□□□ 0.12
SMG9-210ENST00000600097 GP5P40197 560 aa15.77■□□□□ 0.12
SMG9-210ENST00000600097 PIK3CBP42338 1070 aa15.77■□□□□ 0.12
SMG9-210ENST00000600097 SLC37A1P57057 533 aa15.77■□□□□ 0.12
SMG9-210ENST00000600097 RAB10P61026 200 aa15.77■□□□□ 0.12
SMG9-210ENST00000600097 CRYZQ08257 329 aaKnown RBP15.77■□□□□ 0.12
SMG9-210ENST00000600097 EBPQ15125 230 aaKnown RBP15.77■□□□□ 0.12
SMG9-210ENST00000600097 C18orf63Q68DL7 685 aa15.77■□□□□ 0.12
SMG9-210ENST00000600097 GRHL2Q6ISB3 625 aa15.77■□□□□ 0.12
SMG9-210ENST00000600097 PAMR1Q6UXH9 720 aa15.77■□□□□ 0.12
SMG9-210ENST00000600097 SYT10Q6XYQ8 523 aa15.77■□□□□ 0.12
SMG9-210ENST00000600097 CYS1Q717R9 158 aa15.77■□□□□ 0.12
SMG9-210ENST00000600097 HUS1BQ8NHY5 278 aa15.77■□□□□ 0.12
SMG9-210ENST00000600097 UBTD2Q8WUN7 234 aa15.77■□□□□ 0.12
SMG9-210ENST00000600097 DIO2Q92813 273 aa15.77■□□□□ 0.12
SMG9-210ENST00000600097 RIT1Q92963 219 aa15.77■□□□□ 0.12
SMG9-210ENST00000600097 TIMP4Q99727 224 aa15.77■□□□□ 0.12
SMG9-210ENST00000600097 SORBS1Q9BX66 1292 aaKnown RBP15.77■□□□□ 0.12
SMG9-210ENST00000600097 TSC22D4Q9Y3Q8 395 aa15.77■□□□□ 0.12
SMG9-210ENST00000600097 IKBKGQ9Y6K9 419 aa15.77■□□□□ 0.12
SMG9-210ENST00000600097 TUBAL3A6NHL2 446 aa15.76■□□□□ 0.11
SMG9-210ENST00000600097 CXorf49A8MYA2 514 aaPredicted RBP15.76■□□□□ 0.11
SMG9-210ENST00000600097 PLPP1O14494 284 aa15.76■□□□□ 0.11
SMG9-210ENST00000600097 SNX4O95219 450 aa15.76■□□□□ 0.11
SMG9-210ENST00000600097 GOSR1O95249 250 aa15.76■□□□□ 0.11
SMG9-210ENST00000600097 RAF1P04049 648 aa15.76■□□□□ 0.11
SMG9-210ENST00000600097 EPXP11678 715 aa15.76■□□□□ 0.11
SMG9-210ENST00000600097 EPB42P16452 691 aa15.76■□□□□ 0.11
SMG9-210ENST00000600097 SSTR1P30872 391 aa15.76■□□□□ 0.11
SMG9-210ENST00000600097 TMED10P49755 219 aaKnown RBP15.76■□□□□ 0.11
SMG9-210ENST00000600097 HNRNPH2P55795 449 aaKnown RBP15.76■□□□□ 0.11
SMG9-210ENST00000600097 ADAM8P78325 824 aa15.76■□□□□ 0.11
SMG9-210ENST00000600097 DDX39BQ13838 428 aaKnown RBP15.76■□□□□ 0.11
SMG9-210ENST00000600097 RPS6KA2Q15349 733 aa15.76■□□□□ 0.11
SMG9-210ENST00000600097 FBXW10Q5XX13 1052 aa15.76■□□□□ 0.11
SMG9-210ENST00000600097 NSUN5P2Q63ZY6 315 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms