RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	C7orf57	Q8NEG2	295 aa		20.57	■□□□□ 0.88
LTBP4-227	ENST00000600026	OR4K14	Q8NGD5	310 aa		20.57	■□□□□ 0.88
LTBP4-227	ENST00000600026	DNAJB14	Q8TBM8	379 aa		20.57	■□□□□ 0.88
LTBP4-227	ENST00000600026	METTL21A	Q8WXB1	218 aa		20.57	■□□□□ 0.88
LTBP4-227	ENST00000600026	THAP4	Q8WY91	577 aa		20.57	■□□□□ 0.88
LTBP4-227	ENST00000600026	NACC2	Q96BF6	587 aa		20.57	■□□□□ 0.88
LTBP4-227	ENST00000600026	COQ8B	Q96D53	544 aa		20.57	■□□□□ 0.88
LTBP4-227	ENST00000600026	IP6K3	Q96PC2	410 aa		20.57	■□□□□ 0.88
LTBP4-227	ENST00000600026	DUSP26	Q9BV47	211 aa		20.57	■□□□□ 0.88
LTBP4-227	ENST00000600026	BHLHE41	Q9C0J9	482 aa	Predicted RBP	20.57	■□□□□ 0.88
LTBP4-227	ENST00000600026	P4HTM	Q9NXG6	502 aa		20.57	■□□□□ 0.88
LTBP4-227	ENST00000600026	TAS2R7	Q9NYW3	318 aa		20.57	■□□□□ 0.88
LTBP4-227	ENST00000600026	CES1P1	Q9UKY3	287 aa		20.57	■□□□□ 0.88
LTBP4-227	ENST00000600026	ENTPD4	Q9Y227	616 aa		20.57	■□□□□ 0.88
LTBP4-227	ENST00000600026	ZNF780B	Q9Y6R6	833 aa		20.57	■□□□□ 0.88
LTBP4-227	ENST00000600026	LOC102723996	A0A087X1L8	192 aa		20.56	■□□□□ 0.88
LTBP4-227	ENST00000600026	IGKV3D-11	A0A0A0MRZ8	115 aa		20.56	■□□□□ 0.88
LTBP4-227	ENST00000600026	CCDC154	A6NI56	674 aa		20.56	■□□□□ 0.88
LTBP4-227	ENST00000600026		C9JVG2	144 aa		20.56	■□□□□ 0.88
LTBP4-227	ENST00000600026	TGFBR3L	H3BV60	316 aa		20.56	■□□□□ 0.88
LTBP4-227	ENST00000600026	NR5A2	O00482	541 aa		20.56	■□□□□ 0.88
LTBP4-227	ENST00000600026	PEX12	O00623	359 aa		20.56	■□□□□ 0.88
LTBP4-227	ENST00000600026	PCDH17	O14917	1159 aa		20.56	■□□□□ 0.88
LTBP4-227	ENST00000600026	CFLAR	O15519	480 aa		20.56	■□□□□ 0.88
LTBP4-227	ENST00000600026	PDPK1	O15530	556 aa		20.56	■□□□□ 0.88
LTBP4-227	ENST00000600026	SNRPB2	P08579	225 aa	Known RBP	20.56	■□□□□ 0.88
LTBP4-227	ENST00000600026	BIK	Q13323	160 aa		20.56	■□□□□ 0.88
LTBP4-227	ENST00000600026	DEFB109B	Q30KR1	87 aa		20.56	■□□□□ 0.88
LTBP4-227	ENST00000600026	SPANXN4	Q5MJ08	99 aa		20.56	■□□□□ 0.88
LTBP4-227	ENST00000600026	ANXA8L1	Q5VT79	327 aa		20.56	■□□□□ 0.88
LTBP4-227	ENST00000600026	KIRREL2	Q6UWL6	708 aa		20.56	■□□□□ 0.88
LTBP4-227	ENST00000600026	GK5	Q6ZS86	529 aa		20.56	■□□□□ 0.88
LTBP4-227	ENST00000600026	ANKRD37	Q7Z713	158 aa		20.56	■□□□□ 0.88
LTBP4-227	ENST00000600026	FUNDC1	Q8IVP5	155 aa		20.56	■□□□□ 0.88
LTBP4-227	ENST00000600026	FITM2	Q8N6M3	262 aa		20.56	■□□□□ 0.88
LTBP4-227	ENST00000600026	VPS37A	Q8NEZ2	397 aa		20.56	■□□□□ 0.88
LTBP4-227	ENST00000600026	OR11G2	Q8NGC1	345 aa		20.56	■□□□□ 0.88
LTBP4-227	ENST00000600026	OR8J2	Q8NGG1	315 aa		20.56	■□□□□ 0.88
LTBP4-227	ENST00000600026	TSPEAR	Q8WU66	669 aa		20.56	■□□□□ 0.88
LTBP4-227	ENST00000600026	UCN3	Q969E3	161 aa		20.56	■□□□□ 0.88
LTBP4-227	ENST00000600026	BBS4	Q96RK4	519 aa		20.56	■□□□□ 0.88
LTBP4-227	ENST00000600026	SLC25A23	Q9BV35	468 aa		20.56	■□□□□ 0.88
LTBP4-227	ENST00000600026	SLC35C2	Q9NQQ7	365 aa		20.56	■□□□□ 0.88
LTBP4-227	ENST00000600026	C5AR2	Q9P296	337 aa		20.56	■□□□□ 0.88
LTBP4-227	ENST00000600026	C19orf25	Q9UFG5	118 aa	Predicted RBP	20.56	■□□□□ 0.88
LTBP4-227	ENST00000600026	MAN2B2	Q9Y2E5	1009 aa		20.56	■□□□□ 0.88
LTBP4-227	ENST00000600026	CLDN16	Q9Y5I7	305 aa		20.56	■□□□□ 0.88
LTBP4-227	ENST00000600026	TCRBV16S1A1N1	A0A5B0	115 aa		20.55	■□□□□ 0.88
LTBP4-227	ENST00000600026	SYNDIG1L	A6NDD5	238 aa		20.55	■□□□□ 0.88
LTBP4-227	ENST00000600026	ZIC2	O95409	532 aa	Predicted RBP	20.55	■□□□□ 0.88
LTBP4-227	ENST00000600026	GPR75	O95800	540 aa		20.55	■□□□□ 0.88
LTBP4-227	ENST00000600026	LAMP1	P11279	417 aa		20.55	■□□□□ 0.88
LTBP4-227	ENST00000600026	COX6A1	P12074	109 aa		20.55	■□□□□ 0.88
LTBP4-227	ENST00000600026	NTS	P30990	170 aa		20.55	■□□□□ 0.88
LTBP4-227	ENST00000600026	STX4	Q12846	297 aa		20.55	■□□□□ 0.88
LTBP4-227	ENST00000600026	RCAN2	Q14206	197 aa		20.55	■□□□□ 0.88
LTBP4-227	ENST00000600026	NSDHL	Q15738	373 aa		20.55	■□□□□ 0.88
LTBP4-227	ENST00000600026	ZNF385B	Q569K4	471 aa		20.55	■□□□□ 0.88
LTBP4-227	ENST00000600026	RP9	Q8TA86	221 aa	Known RBP	20.55	■□□□□ 0.88
LTBP4-227	ENST00000600026	NUDT8	Q8WV74	236 aa		20.55	■□□□□ 0.88
LTBP4-227	ENST00000600026	CMTM5	Q96DZ9	223 aa		20.55	■□□□□ 0.88
LTBP4-227	ENST00000600026	SPDL1	Q96EA4	605 aa		20.55	■□□□□ 0.88
LTBP4-227	ENST00000600026	IGHV3-20	A0A0C4DH32	117 aa		20.54	■□□□□ 0.88
LTBP4-227	ENST00000600026		A0A1W2PQ72	361 aa		20.54	■□□□□ 0.88
LTBP4-227	ENST00000600026	ARGFX	A6NJG6	315 aa		20.54	■□□□□ 0.88
LTBP4-227	ENST00000600026	FGF17	O60258	216 aa		20.54	■□□□□ 0.88
LTBP4-227	ENST00000600026	LDB3	O75112	727 aa		20.54	■□□□□ 0.88
LTBP4-227	ENST00000600026	PGR	P06401	933 aa		20.54	■□□□□ 0.88
LTBP4-227	ENST00000600026	CSNK2A2	P19784	350 aa	Predicted RBP	20.54	■□□□□ 0.88
LTBP4-227	ENST00000600026	PRDX6	P30041	224 aa		20.54	■□□□□ 0.88
LTBP4-227	ENST00000600026	ZFP36L2	P47974	494 aa	Known RBP	20.54	■□□□□ 0.88
LTBP4-227	ENST00000600026	XK	P51811	444 aa		20.54	■□□□□ 0.88
LTBP4-227	ENST00000600026	DGKQ	P52824	942 aa		20.54	■□□□□ 0.88
LTBP4-227	ENST00000600026	FOLH1	Q04609	750 aa		20.54	■□□□□ 0.88
LTBP4-227	ENST00000600026	CYLC2	Q14093	348 aa	Predicted RBP	20.54	■□□□□ 0.88
LTBP4-227	ENST00000600026	PCOLCE	Q15113	449 aa		20.54	■□□□□ 0.88
LTBP4-227	ENST00000600026	TIGD2	Q4W5G0	525 aa		20.54	■□□□□ 0.88
LTBP4-227	ENST00000600026	CPZ	Q66K79	652 aa		20.54	■□□□□ 0.88
LTBP4-227	ENST00000600026	OR4F3	Q6IEY1	312 aa		20.54	■□□□□ 0.88
LTBP4-227	ENST00000600026	MSANTD1	Q6ZTZ1	278 aa		20.54	■□□□□ 0.88
LTBP4-227	ENST00000600026	GPR155	Q7Z3F1	870 aa		20.54	■□□□□ 0.88
LTBP4-227	ENST00000600026	TREML1	Q86YW5	311 aa		20.54	■□□□□ 0.88
LTBP4-227	ENST00000600026	VPS50	Q96JG6	964 aa		20.54	■□□□□ 0.88
LTBP4-227	ENST00000600026	OR52E6	Q96RD3	313 aa		20.54	■□□□□ 0.88
LTBP4-227	ENST00000600026	RMND5A	Q9H871	391 aa		20.54	■□□□□ 0.88
LTBP4-227	ENST00000600026	FAM120C	Q9NX05	1096 aa	Known RBP	20.54	■□□□□ 0.88
LTBP4-227	ENST00000600026	FBXL4	Q9UKA2	621 aa		20.54	■□□□□ 0.88
LTBP4-227	ENST00000600026	IGHV1-45	A0A0A0MS14	117 aa		20.53	■□□□□ 0.88
LTBP4-227	ENST00000600026	CCT8L1P	A6NM43	557 aa		20.53	■□□□□ 0.88
LTBP4-227	ENST00000600026	WASHC1	A8K0Z3	465 aa		20.53	■□□□□ 0.88
LTBP4-227	ENST00000600026	CAPN14	A8MX76	684 aa		20.53	■□□□□ 0.88
LTBP4-227	ENST00000600026	ANGPT2	O15123	496 aa		20.53	■□□□□ 0.88
LTBP4-227	ENST00000600026	COX4I1	P13073	169 aa		20.53	■□□□□ 0.88
LTBP4-227	ENST00000600026	POR	P16435	677 aa	Predicted RBP	20.53	■□□□□ 0.88
LTBP4-227	ENST00000600026	ID2	Q02363	134 aa		20.53	■□□□□ 0.88
LTBP4-227	ENST00000600026	LRRC74A	Q0VAA2	488 aa		20.53	■□□□□ 0.88
LTBP4-227	ENST00000600026	STX5	Q13190	355 aa		20.53	■□□□□ 0.88
LTBP4-227	ENST00000600026	SERTAD2	Q14140	314 aa		20.53	■□□□□ 0.88
LTBP4-227	ENST00000600026	KRT72	Q14CN4	511 aa		20.53	■□□□□ 0.88
LTBP4-227	ENST00000600026	SFT2D3	Q587I9	215 aa		20.53	■□□□□ 0.88

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms