RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, human

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-223	ENST00000599223	EED	O75530	441 aa	Known RBP	13.51	□□□□□ -0.25
IRF3-223	ENST00000599223	S100B	P04271	92 aa	Predicted RBP	13.51	□□□□□ -0.25
IRF3-223	ENST00000599223	MAN2A2	P49641	1150 aa		13.51	□□□□□ -0.25
IRF3-223	ENST00000599223	WNT3	P56703	355 aa		13.51	□□□□□ -0.25
IRF3-223	ENST00000599223	HERVK_113	P63132	956 aa		13.51	□□□□□ -0.25
IRF3-223	ENST00000599223	ERVK-8	P63133	956 aa		13.51	□□□□□ -0.25
IRF3-223	ENST00000599223	IRF9	Q00978	393 aa		13.51	□□□□□ -0.25
IRF3-223	ENST00000599223	PLIN5	Q00G26	463 aa		13.51	□□□□□ -0.25
IRF3-223	ENST00000599223	PCDH1	Q08174	1060 aa		13.51	□□□□□ -0.25
IRF3-223	ENST00000599223	SLAMF1	Q13291	335 aa		13.51	□□□□□ -0.25
IRF3-223	ENST00000599223	TRADD	Q15628	312 aa		13.51	□□□□□ -0.25
IRF3-223	ENST00000599223	AP5B1	Q2VPB7	878 aa		13.51	□□□□□ -0.25
IRF3-223	ENST00000599223	KBTBD12	Q3ZCT8	623 aa		13.51	□□□□□ -0.25
IRF3-223	ENST00000599223	GRHL2	Q6ISB3	625 aa		13.51	□□□□□ -0.25
IRF3-223	ENST00000599223	CTAGE3P	Q8IX95	158 aa		13.51	□□□□□ -0.25
IRF3-223	ENST00000599223	CENPL	Q8N0S6	344 aa	Predicted RBP	13.51	□□□□□ -0.25
IRF3-223	ENST00000599223	SRFBP1	Q8NEF9	429 aa	Known RBP	13.51	□□□□□ -0.25
IRF3-223	ENST00000599223	FBXO25	Q8TCJ0	367 aa		13.51	□□□□□ -0.25
IRF3-223	ENST00000599223	PAQR8	Q8TEZ7	354 aa		13.51	□□□□□ -0.25
IRF3-223	ENST00000599223	CDKL2	Q92772	493 aa		13.51	□□□□□ -0.25
IRF3-223	ENST00000599223	UCN3	Q969E3	161 aa		13.51	□□□□□ -0.25
IRF3-223	ENST00000599223	GAL3ST4	Q96RP7	486 aa		13.51	□□□□□ -0.25
IRF3-223	ENST00000599223	MTERF1	Q99551	399 aa	Known RBP	13.51	□□□□□ -0.25
IRF3-223	ENST00000599223	ERVK-6	Q9BXR3	956 aa		13.51	□□□□□ -0.25
IRF3-223	ENST00000599223	RPF2	Q9H7B2	306 aa	Known RBP	13.51	□□□□□ -0.25
IRF3-223	ENST00000599223	ZDHHC18	Q9NUE0	388 aa		13.51	□□□□□ -0.25
IRF3-223	ENST00000599223	OPTC	Q9UBM4	332 aa		13.51	□□□□□ -0.25
IRF3-223	ENST00000599223	ERVK-19	Q9WJR5	959 aa		13.51	□□□□□ -0.25
IRF3-223	ENST00000599223	SPACA6	W5XKT8	324 aa		13.51	□□□□□ -0.25
IRF3-223	ENST00000599223	ABCA4	P78363	2273 aa		13.5	□□□□□ -0.25
IRF3-223	ENST00000599223	TRGV5	A0A0B4J1U4	118 aa		13.5	□□□□□ -0.25
IRF3-223	ENST00000599223	GOLGA6L10	A6NI86	522 aa		13.5	□□□□□ -0.25
IRF3-223	ENST00000599223	GLOD5	A6NK44	160 aa		13.5	□□□□□ -0.25
IRF3-223	ENST00000599223	WDR1	O75083	606 aa		13.5	□□□□□ -0.25
IRF3-223	ENST00000599223	FBXO45	P0C2W1	286 aa		13.5	□□□□□ -0.25
IRF3-223	ENST00000599223	FAM153B	P0C7A2	387 aa		13.5	□□□□□ -0.25
IRF3-223	ENST00000599223	COX7A2	P14406	83 aa		13.5	□□□□□ -0.25
IRF3-223	ENST00000599223	ECHS1	P30084	290 aa		13.5	□□□□□ -0.25
IRF3-223	ENST00000599223	ZFP36L2	P47974	494 aa	Known RBP	13.5	□□□□□ -0.25
IRF3-223	ENST00000599223	KCNJ2	P63252	427 aa		13.5	□□□□□ -0.25
IRF3-223	ENST00000599223	EBP	Q15125	230 aa	Known RBP	13.5	□□□□□ -0.25
IRF3-223	ENST00000599223	HIST2H2AC	Q16777	129 aa	Predicted RBP	13.5	□□□□□ -0.25
IRF3-223	ENST00000599223	FAM153C	Q494X1	144 aa		13.5	□□□□□ -0.25
IRF3-223	ENST00000599223	DEPDC1	Q5TB30	811 aa		13.5	□□□□□ -0.25
IRF3-223	ENST00000599223	HIST2H2AA3	Q6FI13	130 aa		13.5	□□□□□ -0.25
IRF3-223	ENST00000599223	OR4C11	Q6IEV9	310 aa		13.5	□□□□□ -0.25
IRF3-223	ENST00000599223	TMEM64	Q6YI46	380 aa		13.5	□□□□□ -0.25
IRF3-223	ENST00000599223	C3orf62	Q6ZUJ4	267 aa		13.5	□□□□□ -0.25
IRF3-223	ENST00000599223	CCDC25	Q86WR0	208 aa		13.5	□□□□□ -0.25
IRF3-223	ENST00000599223	ZZZ3	Q8IYH5	903 aa		13.5	□□□□□ -0.25
IRF3-223	ENST00000599223	LRRC25	Q8N386	305 aa	Predicted RBP	13.5	□□□□□ -0.25
IRF3-223	ENST00000599223	FBXW8	Q8N3Y1	598 aa		13.5	□□□□□ -0.25
IRF3-223	ENST00000599223	ZCCHC7	Q8N3Z6	543 aa	Known RBP	13.5	□□□□□ -0.25
IRF3-223	ENST00000599223	PPM1N	Q8N819	430 aa		13.5	□□□□□ -0.25
IRF3-223	ENST00000599223	RELL2	Q8NC24	303 aa	Predicted RBP	13.5	□□□□□ -0.25
IRF3-223	ENST00000599223	NAXE	Q8NCW5	288 aa		13.5	□□□□□ -0.25
IRF3-223	ENST00000599223	FAM13C	Q8NE31	585 aa		13.5	□□□□□ -0.25
IRF3-223	ENST00000599223	SLC22A8	Q8TCC7	542 aa		13.5	□□□□□ -0.25
IRF3-223	ENST00000599223	KCTD4	Q8WVF5	259 aa		13.5	□□□□□ -0.25
IRF3-223	ENST00000599223	UBLCP1	Q8WVY7	318 aa	Predicted RBP	13.5	□□□□□ -0.25
IRF3-223	ENST00000599223	CMTM7	Q96FZ5	175 aa		13.5	□□□□□ -0.25
IRF3-223	ENST00000599223	WWTR1	Q9GZV5	400 aa		13.5	□□□□□ -0.25
IRF3-223	ENST00000599223	LDAH	Q9H6V9	325 aa		13.5	□□□□□ -0.25
IRF3-223	ENST00000599223	PRM3	Q9NNZ6	103 aa		13.5	□□□□□ -0.25
IRF3-223	ENST00000599223	ACAD8	Q9UKU7	415 aa		13.5	□□□□□ -0.25
IRF3-223	ENST00000599223	CNOT11	Q9UKZ1	510 aa	Known RBP	13.5	□□□□□ -0.25
IRF3-223	ENST00000599223	FLNA	P21333	2647 aa	Known RBP	13.49	□□□□□ -0.25
IRF3-223	ENST00000599223		A0A0A6YYD5	115 aa		13.49	□□□□□ -0.25
IRF3-223	ENST00000599223	EIF3H	O15372	352 aa	Known RBP eCLIP	13.49	□□□□□ -0.25
IRF3-223	ENST00000599223	HCN1	O60741	890 aa		13.49	□□□□□ -0.25
IRF3-223	ENST00000599223	DIAPH2	O60879	1101 aa		13.49	□□□□□ -0.25
IRF3-223	ENST00000599223	ZWINT	O95229	277 aa		13.49	□□□□□ -0.25
IRF3-223	ENST00000599223	ALOX15	P16050	662 aa	Predicted RBP	13.49	□□□□□ -0.25
IRF3-223	ENST00000599223	SERPINB1	P30740	379 aa		13.49	□□□□□ -0.25
IRF3-223	ENST00000599223	RAP1GDS1	P52306	607 aa		13.49	□□□□□ -0.25
IRF3-223	ENST00000599223	IST1	P53990	364 aa		13.49	□□□□□ -0.25
IRF3-223	ENST00000599223	SLC37A1	P57057	533 aa		13.49	□□□□□ -0.25
IRF3-223	ENST00000599223	RPS13	P62277	151 aa	Known RBP	13.49	□□□□□ -0.25
IRF3-223	ENST00000599223	ILF2	Q12905	390 aa	Known RBP	13.49	□□□□□ -0.25
IRF3-223	ENST00000599223	SLC10A1	Q14973	349 aa		13.49	□□□□□ -0.25
IRF3-223	ENST00000599223	SPRED3	Q2MJR0	410 aa		13.49	□□□□□ -0.25
IRF3-223	ENST00000599223	WLS	Q5T9L3	541 aa		13.49	□□□□□ -0.25
IRF3-223	ENST00000599223	SLC22A10	Q63ZE4	541 aa		13.49	□□□□□ -0.25
IRF3-223	ENST00000599223	BICRAL	Q6AI39	1079 aa		13.49	□□□□□ -0.25
IRF3-223	ENST00000599223	MRM1	Q6IN84	353 aa	Known RBP	13.49	□□□□□ -0.25
IRF3-223	ENST00000599223	ZDHHC24	Q6UX98	284 aa		13.49	□□□□□ -0.25
IRF3-223	ENST00000599223	RAPH1	Q70E73	1250 aa		13.49	□□□□□ -0.25
IRF3-223	ENST00000599223	CHSY3	Q70JA7	882 aa		13.49	□□□□□ -0.25
IRF3-223	ENST00000599223	TRMT10C	Q7L0Y3	403 aa	Known RBP	13.49	□□□□□ -0.25
IRF3-223	ENST00000599223	WDR53	Q7Z5U6	358 aa	Predicted RBP	13.49	□□□□□ -0.25
IRF3-223	ENST00000599223	GPR180	Q86V85	440 aa		13.49	□□□□□ -0.25
IRF3-223	ENST00000599223	MYLK4	Q86YV6	388 aa	Predicted RBP	13.49	□□□□□ -0.25
IRF3-223	ENST00000599223	CLYBL	Q8N0X4	340 aa		13.49	□□□□□ -0.25
IRF3-223	ENST00000599223	TEX9	Q8N6V9	391 aa		13.49	□□□□□ -0.25
IRF3-223	ENST00000599223	STAG3L4	Q8TBR4	150 aa		13.49	□□□□□ -0.25
IRF3-223	ENST00000599223	UBE2E3	Q969T4	207 aa		13.49	□□□□□ -0.25
IRF3-223	ENST00000599223	SARAF	Q96BY9	339 aa		13.49	□□□□□ -0.25
IRF3-223	ENST00000599223	NXNL1	Q96CM4	212 aa		13.49	□□□□□ -0.25
IRF3-223	ENST00000599223	LIME1	Q9H400	295 aa		13.49	□□□□□ -0.25
IRF3-223	ENST00000599223	EXO5	Q9H790	373 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms