RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	ART5	Q96L15	291 aa		9.69	□□□□□ -0.86
LSM4-205	ENST00000597776	JSRP1	Q96MG2	331 aa	Predicted RBP	9.69	□□□□□ -0.86
LSM4-205	ENST00000597776	CENPK	Q9BS16	269 aa		9.69	□□□□□ -0.86
LSM4-205	ENST00000597776	WWTR1	Q9GZV5	400 aa		9.69	□□□□□ -0.86
LSM4-205	ENST00000597776	ACTR8	Q9H981	624 aa		9.69	□□□□□ -0.86
LSM4-205	ENST00000597776	ZFP64	Q9NPA5	681 aa		9.69	□□□□□ -0.86
LSM4-205	ENST00000597776	MS4A12	Q9NXJ0	267 aa		9.69	□□□□□ -0.86
LSM4-205	ENST00000597776	CNOT11	Q9UKZ1	510 aa	Known RBP	9.69	□□□□□ -0.86
LSM4-205	ENST00000597776	BOK	Q9UMX3	212 aa	Predicted RBP	9.69	□□□□□ -0.86
LSM4-205	ENST00000597776	ASB4	Q9Y574	426 aa		9.69	□□□□□ -0.86
LSM4-205	ENST00000597776	ANGPTL3	Q9Y5C1	460 aa		9.69	□□□□□ -0.86
LSM4-205	ENST00000597776	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	9.69	□□□□□ -0.86
LSM4-205	ENST00000597776		A0A0A6YYD5	115 aa		9.68	□□□□□ -0.86
LSM4-205	ENST00000597776	KDM4E	B2RXH2	506 aa	Predicted RBP	9.68	□□□□□ -0.86
LSM4-205	ENST00000597776	PROM1	O43490	865 aa		9.68	□□□□□ -0.86
LSM4-205	ENST00000597776	GPR75	O95800	540 aa		9.68	□□□□□ -0.86
LSM4-205	ENST00000597776	AIFM1	O95831	613 aa		9.68	□□□□□ -0.86
LSM4-205	ENST00000597776	GBA	P04062	536 aa		9.68	□□□□□ -0.86
LSM4-205	ENST00000597776	CLPS	P04118	112 aa		9.68	□□□□□ -0.86
LSM4-205	ENST00000597776	FBXO45	P0C2W1	286 aa		9.68	□□□□□ -0.86
LSM4-205	ENST00000597776	FAM58BP	P0C7Q3	252 aa		9.68	□□□□□ -0.86
LSM4-205	ENST00000597776	NR2F6	P10588	404 aa		9.68	□□□□□ -0.86
LSM4-205	ENST00000597776	GFAP	P14136	432 aa		9.68	□□□□□ -0.86
LSM4-205	ENST00000597776	TLX1	P31314	330 aa	Predicted RBP	9.68	□□□□□ -0.86
LSM4-205	ENST00000597776	SSTR4	P31391	388 aa		9.68	□□□□□ -0.86
LSM4-205	ENST00000597776	DNAJA1	P31689	397 aa	Known RBP	9.68	□□□□□ -0.86
LSM4-205	ENST00000597776	STX2	P32856	288 aa		9.68	□□□□□ -0.86
LSM4-205	ENST00000597776	BSG	P35613	385 aa		9.68	□□□□□ -0.86
LSM4-205	ENST00000597776	BUD31	P41223	144 aa	Predicted RBP	9.68	□□□□□ -0.86
LSM4-205	ENST00000597776	PIK3CG	P48736	1102 aa		9.68	□□□□□ -0.86
LSM4-205	ENST00000597776	NEK2	P51955	445 aa		9.68	□□□□□ -0.86
LSM4-205	ENST00000597776	WNT3	P56703	355 aa		9.68	□□□□□ -0.86
LSM4-205	ENST00000597776	SLC37A1	P57057	533 aa		9.68	□□□□□ -0.86
LSM4-205	ENST00000597776	SETDB1	Q15047	1291 aa		9.68	□□□□□ -0.86
LSM4-205	ENST00000597776	CPSF6	Q16630	551 aa	Known RBP eCLIP	9.68	□□□□□ -0.86
LSM4-205	ENST00000597776	SPRED3	Q2MJR0	410 aa		9.68	□□□□□ -0.86
LSM4-205	ENST00000597776	MROH9	Q5TGP6	573 aa		9.68	□□□□□ -0.86
LSM4-205	ENST00000597776	BICRAL	Q6AI39	1079 aa		9.68	□□□□□ -0.86
LSM4-205	ENST00000597776	MRM1	Q6IN84	353 aa	Known RBP	9.68	□□□□□ -0.86
LSM4-205	ENST00000597776	ZDHHC24	Q6UX98	284 aa		9.68	□□□□□ -0.86
LSM4-205	ENST00000597776	SEM1	Q6ZVN7	128 aa		9.68	□□□□□ -0.86
LSM4-205	ENST00000597776	ZZZ3	Q8IYH5	903 aa		9.68	□□□□□ -0.86
LSM4-205	ENST00000597776	LRRC25	Q8N386	305 aa	Predicted RBP	9.68	□□□□□ -0.86
LSM4-205	ENST00000597776	SLC15A4	Q8N697	577 aa		9.68	□□□□□ -0.86
LSM4-205	ENST00000597776	RIT1	Q92963	219 aa		9.68	□□□□□ -0.86
LSM4-205	ENST00000597776	DOHH	Q9BU89	302 aa		9.68	□□□□□ -0.86
LSM4-205	ENST00000597776	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	9.68	□□□□□ -0.86
LSM4-205	ENST00000597776	CNIH4	Q9P003	139 aa		9.68	□□□□□ -0.86
LSM4-205	ENST00000597776	ADGRE2	Q9UHX3	823 aa		9.68	□□□□□ -0.86
LSM4-205	ENST00000597776	ACOT9	Q9Y305	439 aa		9.68	□□□□□ -0.86
LSM4-205	ENST00000597776	RNF11	Q9Y3C5	154 aa		9.68	□□□□□ -0.86
LSM4-205	ENST00000597776	PCDHGA11	Q9Y5H2	935 aa		9.68	□□□□□ -0.86
LSM4-205	ENST00000597776		A0A087X1B8	175 aa		9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	HMX2	A2RU54	273 aa		9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	SYCE1L	A8MT33	242 aa		9.67	□□□□□ -0.86
LSM4-205	ENST00000597776		H0YIV9	168 aa		9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	PGRMC2	O15173	223 aa		9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	DIAPH2	O60879	1101 aa		9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	SIX3	O95343	332 aa	Predicted RBP	9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	C2	P06681	752 aa		9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	GABRA1	P14867	456 aa		9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	CD1E	P15812	388 aa		9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	PTX3	P26022	381 aa	Predicted RBP	9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	GDF1	P27539	372 aa		9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	SERPINB3	P29508	390 aa		9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	ALDH18A1	P54886	795 aa	Known RBP	9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	FBXW4	P57775	412 aa		9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	PHEX	P78562	749 aa		9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	BIK	Q13323	160 aa		9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	NAB1	Q13506	487 aa		9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	GTF2H2	Q13888	395 aa		9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	NTRK2	Q16620	822 aa		9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	FAM83E	Q2M2I3	478 aa		9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	SLC25A35	Q3KQZ1	300 aa		9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	UBAP2	Q5T6F2	1119 aa	Known RBP	9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	RIPPLY2	Q5TAB7	128 aa		9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	LIPJ	Q5W064	366 aa		9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	GTF2H2C	Q6P1K8	395 aa		9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	CYP20A1	Q6UW02	462 aa		9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	ARSK	Q6UWY0	536 aa		9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	GOLGA7	Q7Z5G4	137 aa		9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	ULK2	Q8IYT8	1036 aa		9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	RELL2	Q8NC24	303 aa	Predicted RBP	9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	C7orf57	Q8NEG2	295 aa		9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	MYRIP	Q8NFW9	859 aa		9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	NEIL3	Q8TAT5	605 aa		9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	CDK15	Q96Q40	435 aa		9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	PELO	Q9BRX2	385 aa	Known RBP	9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	DDX31	Q9H8H2	851 aa	Known RBP	9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	ACKR4	Q9NPB9	350 aa		9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	SNX15	Q9NRS6	342 aa		9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	LYAR	Q9NX58	379 aa	Known RBP	9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	TEX10	Q9NXF1	929 aa	Predicted RBP	9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	DNAJB12	Q9NXW2	375 aa	Known RBP	9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	CPSF2	Q9P2I0	782 aa	Known RBP	9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	UTP11	Q9Y3A2	253 aa	Known RBP	9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	TSC22D4	Q9Y3Q8	395 aa		9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	HRNR	Q86YZ3	2850 aa	Predicted RBP	9.67	□□□□□ -0.86
LSM4-205	ENST00000597776	ITPR3	Q14573	2671 aa		9.66	□□□□□ -0.86
LSM4-205	ENST00000597776		A0A096LPK6	155 aa		9.66	□□□□□ -0.86

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