RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 CNPPD1Q9BV87 410 aa18.33■□□□□ 0.52
SHKBP1-214ENST00000597396 ZBTB20Q9HC78 741 aaPredicted RBP18.33■□□□□ 0.52
SHKBP1-214ENST00000597396 MIEF1Q9NQG6 463 aa18.33■□□□□ 0.52
SHKBP1-214ENST00000597396 GIMAP4Q9NUV9 329 aa18.33■□□□□ 0.52
SHKBP1-214ENST00000597396 INTS9Q9NV88 658 aaKnown RBP18.33■□□□□ 0.52
SHKBP1-214ENST00000597396 ABI3Q9P2A4 366 aa18.33■□□□□ 0.52
SHKBP1-214ENST00000597396 PPIEQ9UNP9 301 aaKnown RBP18.33■□□□□ 0.52
SHKBP1-214ENST00000597396 SETXQ7Z333 2677 aaKnown RBP18.33■□□□□ 0.52
SHKBP1-214ENST00000597396 A0A1W2PS29 197 aa18.32■□□□□ 0.52
SHKBP1-214ENST00000597396 KLF11O14901 512 aa18.32■□□□□ 0.52
SHKBP1-214ENST00000597396 SLC28A2O43868 658 aa18.32■□□□□ 0.52
SHKBP1-214ENST00000597396 DDAH2O95865 285 aa18.32■□□□□ 0.52
SHKBP1-214ENST00000597396 JUNP05412 331 aaKnown RBP18.32■□□□□ 0.52
SHKBP1-214ENST00000597396 CSNK2A2P19784 350 aaPredicted RBP18.32■□□□□ 0.52
SHKBP1-214ENST00000597396 NT5EP21589 574 aa18.32■□□□□ 0.52
SHKBP1-214ENST00000597396 FEN1P39748 380 aaKnown RBP18.32■□□□□ 0.52
SHKBP1-214ENST00000597396 MEP1AQ16819 746 aa18.32■□□□□ 0.52
SHKBP1-214ENST00000597396 ZNF750Q32MQ0 723 aa18.32■□□□□ 0.52
SHKBP1-214ENST00000597396 HSP90B2PQ58FF3 399 aa18.32■□□□□ 0.52
SHKBP1-214ENST00000597396 FAM71E1Q6IPT2 247 aa18.32■□□□□ 0.52
SHKBP1-214ENST00000597396 H3F3CQ6NXT2 135 aa18.32■□□□□ 0.52
SHKBP1-214ENST00000597396 IGFL3Q6UXB1 125 aa18.32■□□□□ 0.52
SHKBP1-214ENST00000597396 DGAT2L6Q6ZPD8 337 aa18.32■□□□□ 0.52
SHKBP1-214ENST00000597396 IKBIPQ70UQ0 350 aa18.32■□□□□ 0.52
SHKBP1-214ENST00000597396 CRLF3Q8IUI8 442 aa18.32■□□□□ 0.52
SHKBP1-214ENST00000597396 FNDC5Q8NAU1 212 aa18.32■□□□□ 0.52
SHKBP1-214ENST00000597396 OR1N1Q8NGS0 311 aa18.32■□□□□ 0.52
SHKBP1-214ENST00000597396 DOK4Q8TEW6 326 aa18.32■□□□□ 0.52
SHKBP1-214ENST00000597396 RIT1Q92963 219 aa18.32■□□□□ 0.52
SHKBP1-214ENST00000597396 MFRPQ9BY79 579 aa18.32■□□□□ 0.52
SHKBP1-214ENST00000597396 ENTPD4Q9Y227 616 aa18.32■□□□□ 0.52
SHKBP1-214ENST00000597396 HEMK1Q9Y5R4 338 aaPredicted RBP18.32■□□□□ 0.52
SHKBP1-214ENST00000597396 DYTNA2CJ06 578 aa18.31■□□□□ 0.52
SHKBP1-214ENST00000597396 PYCARD-AS1I3L0S3 204 aa18.31■□□□□ 0.52
SHKBP1-214ENST00000597396 KITP10721 976 aa18.31■□□□□ 0.52
SHKBP1-214ENST00000597396 SDC1P18827 310 aa18.31■□□□□ 0.52
SHKBP1-214ENST00000597396 DDCP20711 480 aa18.31■□□□□ 0.52
SHKBP1-214ENST00000597396 TACR1P25103 407 aa18.31■□□□□ 0.52
SHKBP1-214ENST00000597396 GALNSP34059 522 aa18.31■□□□□ 0.52
SHKBP1-214ENST00000597396 GPR143P51810 404 aa18.31■□□□□ 0.52
SHKBP1-214ENST00000597396 ERVK-8P63133 956 aa18.31■□□□□ 0.52
SHKBP1-214ENST00000597396 ARG2P78540 354 aa18.31■□□□□ 0.52
SHKBP1-214ENST00000597396 OCRLQ01968 901 aa18.31■□□□□ 0.52
SHKBP1-214ENST00000597396 ZNF267Q14586 743 aaPredicted RBP18.31■□□□□ 0.52
SHKBP1-214ENST00000597396 SPRED3Q2MJR0 410 aa18.31■□□□□ 0.52
SHKBP1-214ENST00000597396 ACER2Q5QJU3 275 aa18.31■□□□□ 0.52
SHKBP1-214ENST00000597396 C6orf136Q5SQH8 315 aa18.31■□□□□ 0.52
SHKBP1-214ENST00000597396 IGFL2Q6UWQ7 119 aa18.31■□□□□ 0.52
SHKBP1-214ENST00000597396 RPS19BP1Q86WX3 136 aaKnown RBP18.31■□□□□ 0.52
SHKBP1-214ENST00000597396 GALNT12Q8IXK2 581 aa18.31■□□□□ 0.52
SHKBP1-214ENST00000597396 SAMD14Q8IZD0 417 aaPredicted RBP18.31■□□□□ 0.52
SHKBP1-214ENST00000597396 RBMXL3Q8N7X1 1067 aaKnown RBP18.31■□□□□ 0.52
SHKBP1-214ENST00000597396 THAP3Q8WTV1 239 aaPredicted RBP18.31■□□□□ 0.52
SHKBP1-214ENST00000597396 SENP5Q96HI0 755 aaPredicted RBP18.31■□□□□ 0.52
SHKBP1-214ENST00000597396 TSSK3Q96PN8 268 aa18.31■□□□□ 0.52
SHKBP1-214ENST00000597396 C1orf50Q9BV19 199 aa18.31■□□□□ 0.52
SHKBP1-214ENST00000597396 NUF2Q9BZD4 464 aa18.31■□□□□ 0.52
SHKBP1-214ENST00000597396 CDCP1Q9H5V8 836 aa18.31■□□□□ 0.52
SHKBP1-214ENST00000597396 STMN3Q9NZ72 180 aa18.31■□□□□ 0.52
SHKBP1-214ENST00000597396 EHD3Q9NZN3 535 aa18.31■□□□□ 0.52
SHKBP1-214ENST00000597396 MARCOQ9UEW3 520 aaPredicted RBP18.31■□□□□ 0.52
SHKBP1-214ENST00000597396 ZNF223Q9UK11 482 aaPredicted RBP18.31■□□□□ 0.52
SHKBP1-214ENST00000597396 ERVK-19Q9WJR5 959 aa18.31■□□□□ 0.52
SHKBP1-214ENST00000597396 ZFAND5O76080 213 aa18.3■□□□□ 0.52
SHKBP1-214ENST00000597396 BCKDHAP12694 445 aa18.3■□□□□ 0.52
SHKBP1-214ENST00000597396 ASMTP46597 345 aa18.3■□□□□ 0.52
SHKBP1-214ENST00000597396 HK2P52789 917 aa18.3■□□□□ 0.52
SHKBP1-214ENST00000597396 MAD2L1Q13257 205 aaPredicted RBP18.3■□□□□ 0.52
SHKBP1-214ENST00000597396 NADK2Q4G0N4 442 aa18.3■□□□□ 0.52
SHKBP1-214ENST00000597396 FAM180BQ6P0A1 224 aa18.3■□□□□ 0.52
SHKBP1-214ENST00000597396 HSDL2Q6YN16 418 aa18.3■□□□□ 0.52
SHKBP1-214ENST00000597396 PRICKLE2Q7Z3G6 844 aa18.3■□□□□ 0.52
SHKBP1-214ENST00000597396 TICAM1Q8IUC6 712 aa18.3■□□□□ 0.52
SHKBP1-214ENST00000597396 LGI4Q8N135 537 aa18.3■□□□□ 0.52
SHKBP1-214ENST00000597396 LRRC25Q8N386 305 aaPredicted RBP18.3■□□□□ 0.52
SHKBP1-214ENST00000597396 ZNF321PQ8N8H1 164 aa18.3■□□□□ 0.52
SHKBP1-214ENST00000597396 CLHC1Q8NHS4 586 aa18.3■□□□□ 0.52
SHKBP1-214ENST00000597396 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.3■□□□□ 0.52
SHKBP1-214ENST00000597396 ZNF721Q8TF20 911 aa18.3■□□□□ 0.52
SHKBP1-214ENST00000597396 GFM2Q969S9 779 aaKnown RBP18.3■□□□□ 0.52
SHKBP1-214ENST00000597396 CNRIP1Q96F85 164 aaPredicted RBP18.3■□□□□ 0.52
SHKBP1-214ENST00000597396 FBXL20Q96IG2 436 aa18.3■□□□□ 0.52
SHKBP1-214ENST00000597396 EGLN2Q96KS0 407 aa18.3■□□□□ 0.52
SHKBP1-214ENST00000597396 BBS4Q96RK4 519 aa18.3■□□□□ 0.52
SHKBP1-214ENST00000597396 CXorf21Q9HAI6 301 aa18.3■□□□□ 0.52
SHKBP1-214ENST00000597396 SLC35C2Q9NQQ7 365 aa18.3■□□□□ 0.52
SHKBP1-214ENST00000597396 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.3■□□□□ 0.52
SHKBP1-214ENST00000597396 PLA2G3Q9NZ20 509 aa18.3■□□□□ 0.52
SHKBP1-214ENST00000597396 ANAPC2Q9UJX6 822 aa18.3■□□□□ 0.52
SHKBP1-214ENST00000597396 SLCO1B7G3V0H7 640 aa18.29■□□□□ 0.52
SHKBP1-214ENST00000597396 AKAP10O43572 662 aa18.29■□□□□ 0.52
SHKBP1-214ENST00000597396 LRATO95237 230 aa18.29■□□□□ 0.52
SHKBP1-214ENST00000597396 F10P00742 488 aa18.29■□□□□ 0.52
SHKBP1-214ENST00000597396 CD97P48960 835 aa18.29■□□□□ 0.52
SHKBP1-214ENST00000597396 COLEC12Q5KU26 742 aa18.29■□□□□ 0.52
SHKBP1-214ENST00000597396 IL23RQ5VWK5 629 aa18.29■□□□□ 0.52
SHKBP1-214ENST00000597396 RNF111Q6ZNA4 994 aa18.29■□□□□ 0.52
SHKBP1-214ENST00000597396 BEST3Q8N1M1 668 aa18.29■□□□□ 0.52
SHKBP1-214ENST00000597396 LIX1Q8N485 282 aa18.29■□□□□ 0.52
SHKBP1-214ENST00000597396 NPAS2Q99743 824 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms