RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 ACSM2AQ08AH3 577 aa10.35□□□□□ -0.75
VRK3-210ENST00000596121 DUSP8Q13202 625 aa10.35□□□□□ -0.75
VRK3-210ENST00000596121 OR1C1Q15619 314 aa10.35□□□□□ -0.75
VRK3-210ENST00000596121 SPRED3Q2MJR0 410 aa10.35□□□□□ -0.75
VRK3-210ENST00000596121 SPIN4Q56A73 249 aa10.35□□□□□ -0.75
VRK3-210ENST00000596121 SPDYAQ5MJ70 313 aa10.35□□□□□ -0.75
VRK3-210ENST00000596121 ACSM2BQ68CK6 577 aa10.35□□□□□ -0.75
VRK3-210ENST00000596121 FAM111BQ6SJ93 734 aa10.35□□□□□ -0.75
VRK3-210ENST00000596121 HSDL2Q6YN16 418 aa10.35□□□□□ -0.75
VRK3-210ENST00000596121 C9orf40Q8IXQ3 194 aa10.35□□□□□ -0.75
VRK3-210ENST00000596121 OR4K14Q8NGD5 310 aa10.35□□□□□ -0.75
VRK3-210ENST00000596121 AGR3Q8TD06 166 aa10.35□□□□□ -0.75
VRK3-210ENST00000596121 GRHL3Q8TE85 626 aa10.35□□□□□ -0.75
VRK3-210ENST00000596121 RIT1Q92963 219 aa10.35□□□□□ -0.75
VRK3-210ENST00000596121 ARL8AQ96BM9 186 aa10.35□□□□□ -0.75
VRK3-210ENST00000596121 CNRIP1Q96F85 164 aaPredicted RBP10.35□□□□□ -0.75
VRK3-210ENST00000596121 SCMH1Q96GD3 660 aa10.35□□□□□ -0.75
VRK3-210ENST00000596121 FBXL20Q96IG2 436 aa10.35□□□□□ -0.75
VRK3-210ENST00000596121 C3orf30Q96M34 536 aa10.35□□□□□ -0.75
VRK3-210ENST00000596121 WDR41Q9HAD4 459 aa10.35□□□□□ -0.75
VRK3-210ENST00000596121 CXorf21Q9HAI6 301 aa10.35□□□□□ -0.75
VRK3-210ENST00000596121 KCNK9Q9NPC2 374 aa10.35□□□□□ -0.75
VRK3-210ENST00000596121 MYOTQ9UBF9 498 aa10.35□□□□□ -0.75
VRK3-210ENST00000596121 ERVK-19Q9WJR5 959 aa10.35□□□□□ -0.75
VRK3-210ENST00000596121 POLR3HQ9Y535 204 aaPredicted RBP10.35□□□□□ -0.75
VRK3-210ENST00000596121 COPG1Q9Y678 874 aaKnown RBP10.35□□□□□ -0.75
VRK3-210ENST00000596121 GNG14A0A1W2PPG7 69 aa10.34□□□□□ -0.75
VRK3-210ENST00000596121 C1orf226A1L170 272 aa10.34□□□□□ -0.75
VRK3-210ENST00000596121 PIP5K1BO14986 540 aa10.34□□□□□ -0.75
VRK3-210ENST00000596121 OR10H2O60403 315 aa10.34□□□□□ -0.75
VRK3-210ENST00000596121 PRAMEF2O60811 474 aa10.34□□□□□ -0.75
VRK3-210ENST00000596121 ERAL1O75616 437 aaKnown RBP10.34□□□□□ -0.75
VRK3-210ENST00000596121 RSL1D1O76021 490 aaKnown RBP10.34□□□□□ -0.75
VRK3-210ENST00000596121 OR6B1O95007 311 aa10.34□□□□□ -0.75
VRK3-210ENST00000596121 NADKO95544 446 aaPredicted RBP10.34□□□□□ -0.75
VRK3-210ENST00000596121 JUNP05412 331 aaKnown RBP10.34□□□□□ -0.75
VRK3-210ENST00000596121 ANXA4P09525 319 aaPredicted RBP10.34□□□□□ -0.75
VRK3-210ENST00000596121 MYZAPP0CAP1 466 aa10.34□□□□□ -0.75
VRK3-210ENST00000596121 BGNP21810 368 aa10.34□□□□□ -0.75
VRK3-210ENST00000596121 GNLYP22749 145 aa10.34□□□□□ -0.75
VRK3-210ENST00000596121 PIK3R1P27986 724 aa10.34□□□□□ -0.75
VRK3-210ENST00000596121 SSTR4P31391 388 aa10.34□□□□□ -0.75
VRK3-210ENST00000596121 GALNSP34059 522 aa10.34□□□□□ -0.75
VRK3-210ENST00000596121 ALDH9A1P49189 494 aa10.34□□□□□ -0.75
VRK3-210ENST00000596121 HLCSP50747 726 aa10.34□□□□□ -0.75
VRK3-210ENST00000596121 SLC37A1P57057 533 aa10.34□□□□□ -0.75
VRK3-210ENST00000596121 MAGOHP61326 146 aaKnown RBP10.34□□□□□ -0.75
VRK3-210ENST00000596121 PLIN5Q00G26 463 aa10.34□□□□□ -0.75
VRK3-210ENST00000596121 PMP22Q01453 160 aa10.34□□□□□ -0.75
VRK3-210ENST00000596121 OC90Q02509 493 aaPredicted RBP10.34□□□□□ -0.75
VRK3-210ENST00000596121 FUT7Q11130 342 aa10.34□□□□□ -0.75
VRK3-210ENST00000596121 ASPHQ12797 758 aa10.34□□□□□ -0.75
VRK3-210ENST00000596121 BIKQ13323 160 aa10.34□□□□□ -0.75
VRK3-210ENST00000596121 MRPL49Q13405 166 aaKnown RBP10.34□□□□□ -0.75
VRK3-210ENST00000596121 LTB4RQ15722 352 aa10.34□□□□□ -0.75
VRK3-210ENST00000596121 CHI3L2Q15782 390 aa10.34□□□□□ -0.75
VRK3-210ENST00000596121 RFTN2Q52LD8 501 aaPredicted RBP10.34□□□□□ -0.75
VRK3-210ENST00000596121 ZNF766Q5HY98 468 aa10.34□□□□□ -0.75
VRK3-210ENST00000596121 SH2D4BQ5SQS7 431 aa10.34□□□□□ -0.75
VRK3-210ENST00000596121 ZNF324BQ6AW86 544 aaPredicted RBP10.34□□□□□ -0.75
VRK3-210ENST00000596121 FAM71E1Q6IPT2 247 aa10.34□□□□□ -0.75
VRK3-210ENST00000596121 NOXRED1Q6NXP6 359 aa10.34□□□□□ -0.75
VRK3-210ENST00000596121 RPUSD3Q6P087 351 aaKnown RBP10.34□□□□□ -0.75
VRK3-210ENST00000596121 LYPD8Q6UX82 237 aa10.34□□□□□ -0.75
VRK3-210ENST00000596121 RNF165Q6ZSG1 346 aa10.34□□□□□ -0.75
VRK3-210ENST00000596121 MDGA2Q7Z553 956 aa10.34□□□□□ -0.75
VRK3-210ENST00000596121 CROCCP2Q86T23 111 aa10.34□□□□□ -0.75
VRK3-210ENST00000596121 CLYBLQ8N0X4 340 aa10.34□□□□□ -0.75
VRK3-210ENST00000596121 ZNF615Q8N8J6 731 aa10.34□□□□□ -0.75
VRK3-210ENST00000596121 TWIST2Q8WVJ9 160 aa10.34□□□□□ -0.75
VRK3-210ENST00000596121 EGLN2Q96KS0 407 aa10.34□□□□□ -0.75
VRK3-210ENST00000596121 FCRL1Q96LA6 429 aa10.34□□□□□ -0.75
VRK3-210ENST00000596121 SORT1Q99523 831 aa10.34□□□□□ -0.75
VRK3-210ENST00000596121 CNPPD1Q9BV87 410 aa10.34□□□□□ -0.75
VRK3-210ENST00000596121 KLHL1Q9NR64 748 aa10.34□□□□□ -0.75
VRK3-210ENST00000596121 LRFN1Q9P244 771 aa10.34□□□□□ -0.75
VRK3-210ENST00000596121 SVILO95425 2214 aa10.34□□□□□ -0.75
VRK3-210ENST00000596121 POLEQ07864 2286 aa10.33□□□□□ -0.76
VRK3-210ENST00000596121 USP9XQ93008 2570 aaPredicted RBP10.33□□□□□ -0.76
VRK3-210ENST00000596121 TMEM120BA0PK00 339 aa10.33□□□□□ -0.76
VRK3-210ENST00000596121 SYNDIG1LA6NDD5 238 aa10.33□□□□□ -0.76
VRK3-210ENST00000596121 SLC28A1O00337 649 aa10.33□□□□□ -0.76
VRK3-210ENST00000596121 LSM1O15116 133 aaKnown RBP10.33□□□□□ -0.76
VRK3-210ENST00000596121 TM9SF1O15321 606 aa10.33□□□□□ -0.76
VRK3-210ENST00000596121 BIRC5O15392 142 aa10.33□□□□□ -0.76
VRK3-210ENST00000596121 GUCY1B2O75343 617 aa10.33□□□□□ -0.76
VRK3-210ENST00000596121 SEC22BO75396 215 aa10.33□□□□□ -0.76
VRK3-210ENST00000596121 NME6O75414 186 aaPredicted RBP10.33□□□□□ -0.76
VRK3-210ENST00000596121 CBX6O95503 412 aa10.33□□□□□ -0.76
VRK3-210ENST00000596121 SP1P08047 785 aa10.33□□□□□ -0.76
VRK3-210ENST00000596121 COX7A2P14406 83 aa10.33□□□□□ -0.76
VRK3-210ENST00000596121 DRD2P14416 443 aa10.33□□□□□ -0.76
VRK3-210ENST00000596121 H2AFXP16104 143 aaPredicted RBP10.33□□□□□ -0.76
VRK3-210ENST00000596121 PORP16435 677 aaPredicted RBP10.33□□□□□ -0.76
VRK3-210ENST00000596121 MST1P26927 711 aa10.33□□□□□ -0.76
VRK3-210ENST00000596121 SERPINB5P36952 375 aa10.33□□□□□ -0.76
VRK3-210ENST00000596121 CYB561P49447 251 aa10.33□□□□□ -0.76
VRK3-210ENST00000596121 C2orf80Q0P641 193 aa10.33□□□□□ -0.76
VRK3-210ENST00000596121 NR6A1Q15406 480 aa10.33□□□□□ -0.76
VRK3-210ENST00000596121 IMPG1Q17R60 797 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms