RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 SENP5Q96HI0 755 aaPredicted RBP24■■□□□ 1.43
TRIM28-204ENST00000594806 OR8D2Q9GZM6 311 aa24■■□□□ 1.43
TRIM28-204ENST00000594806 ZNF395Q9H8N7 513 aaPredicted RBP24■■□□□ 1.43
TRIM28-204ENST00000594806 GIMAP4Q9NUV9 329 aa24■■□□□ 1.43
TRIM28-204ENST00000594806 HEY2Q9UBP5 337 aa24■■□□□ 1.43
TRIM28-204ENST00000594806 UTS2RQ9UKP6 389 aa24■■□□□ 1.43
TRIM28-204ENST00000594806 CASRP41180 1078 aa23.99■■□□□ 1.43
TRIM28-204ENST00000594806 RPL38P63173 70 aaKnown RBP23.99■■□□□ 1.43
TRIM28-204ENST00000594806 ARG2P78540 354 aa23.99■■□□□ 1.43
TRIM28-204ENST00000594806 C2orf80Q0P641 193 aa23.99■■□□□ 1.43
TRIM28-204ENST00000594806 TLR1Q15399 786 aa23.99■■□□□ 1.43
TRIM28-204ENST00000594806 SMU1Q2TAY7 513 aa23.99■■□□□ 1.43
TRIM28-204ENST00000594806 RFTN2Q52LD8 501 aaPredicted RBP23.99■■□□□ 1.43
TRIM28-204ENST00000594806 C6orf163Q5TEZ5 329 aa23.99■■□□□ 1.43
TRIM28-204ENST00000594806 AMER2Q8N7J2 671 aa23.99■■□□□ 1.43
TRIM28-204ENST00000594806 OR5L2Q8NGL0 311 aa23.99■■□□□ 1.43
TRIM28-204ENST00000594806 ZNF721Q8TF20 911 aa23.99■■□□□ 1.43
TRIM28-204ENST00000594806 C19orf60Q96EN9 201 aa23.99■■□□□ 1.43
TRIM28-204ENST00000594806 CDCP1Q9H5V8 836 aa23.99■■□□□ 1.43
TRIM28-204ENST00000594806 TAS2R7Q9NYW3 318 aa23.99■■□□□ 1.43
TRIM28-204ENST00000594806 FCHO1O14526 889 aa23.98■■□□□ 1.43
TRIM28-204ENST00000594806 SKAP2O75563 359 aaPredicted RBP23.98■■□□□ 1.43
TRIM28-204ENST00000594806 ERAL1O75616 437 aaKnown RBP23.98■■□□□ 1.43
TRIM28-204ENST00000594806 IGKV3-11P04433 115 aa23.98■■□□□ 1.43
TRIM28-204ENST00000594806 ATP1B1P05026 303 aa23.98■■□□□ 1.43
TRIM28-204ENST00000594806 ASMTP46597 345 aa23.98■■□□□ 1.43
TRIM28-204ENST00000594806 MLF1P58340 268 aa23.98■■□□□ 1.43
TRIM28-204ENST00000594806 GALNTL6Q49A17 601 aa23.98■■□□□ 1.43
TRIM28-204ENST00000594806 NADK2Q4G0N4 442 aa23.98■■□□□ 1.43
TRIM28-204ENST00000594806 SLC6A19Q695T7 634 aa23.98■■□□□ 1.43
TRIM28-204ENST00000594806 GALNT12Q8IXK2 581 aa23.98■■□□□ 1.43
TRIM28-204ENST00000594806 LRRC34Q8IZ02 419 aa23.98■■□□□ 1.43
TRIM28-204ENST00000594806 CXorf21Q9HAI6 301 aa23.98■■□□□ 1.43
TRIM28-204ENST00000594806 ZNF223Q9UK11 482 aaPredicted RBP23.98■■□□□ 1.43
TRIM28-204ENST00000594806 PPP2R2AP63151 447 aa23.97■■□□□ 1.43
TRIM28-204ENST00000594806 MAD2L1Q13257 205 aaPredicted RBP23.97■■□□□ 1.43
TRIM28-204ENST00000594806 C6orf136Q5SQH8 315 aa23.97■■□□□ 1.43
TRIM28-204ENST00000594806 MMP21Q8N119 569 aa23.97■■□□□ 1.43
TRIM28-204ENST00000594806 LRRC25Q8N386 305 aaPredicted RBP23.97■■□□□ 1.43
TRIM28-204ENST00000594806 TUBGCP3Q96CW5 907 aa23.97■■□□□ 1.43
TRIM28-204ENST00000594806 ZNF764Q96H86 408 aaPredicted RBP23.97■■□□□ 1.43
TRIM28-204ENST00000594806 C3orf30Q96M34 536 aa23.97■■□□□ 1.43
TRIM28-204ENST00000594806 ZNF681Q96N22 645 aa23.97■■□□□ 1.43
TRIM28-204ENST00000594806 NPAS2Q99743 824 aa23.97■■□□□ 1.43
TRIM28-204ENST00000594806 MIEF1Q9NQG6 463 aa23.97■■□□□ 1.43
TRIM28-204ENST00000594806 SLC35C2Q9NQQ7 365 aa23.97■■□□□ 1.43
TRIM28-204ENST00000594806 ENTPD4Q9Y227 616 aa23.97■■□□□ 1.43
TRIM28-204ENST00000594806 OR5H15A6NDH6 313 aa23.96■■□□□ 1.43
TRIM28-204ENST00000594806 OR6C76A6NM76 312 aa23.96■■□□□ 1.43
TRIM28-204ENST00000594806 SLCO1B7G3V0H7 640 aa23.96■■□□□ 1.43
TRIM28-204ENST00000594806 VPS4BO75351 444 aa23.96■■□□□ 1.43
TRIM28-204ENST00000594806 WDPCPO95876 746 aa23.96■■□□□ 1.43
TRIM28-204ENST00000594806 DDX5P17844 614 aaKnown RBP23.96■■□□□ 1.43
TRIM28-204ENST00000594806 CD97P48960 835 aa23.96■■□□□ 1.43
TRIM28-204ENST00000594806 ZNF267Q14586 743 aaPredicted RBP23.96■■□□□ 1.43
TRIM28-204ENST00000594806 CEBPEQ15744 281 aa23.96■■□□□ 1.43
TRIM28-204ENST00000594806 FCRLBQ6BAA4 426 aa23.96■■□□□ 1.43
TRIM28-204ENST00000594806 DGAT2L6Q6ZPD8 337 aa23.96■■□□□ 1.43
TRIM28-204ENST00000594806 BEST3Q8N1M1 668 aa23.96■■□□□ 1.43
TRIM28-204ENST00000594806 CDC26Q8NHZ8 85 aa23.96■■□□□ 1.43
TRIM28-204ENST00000594806 NUBPLQ8TB37 319 aa23.96■■□□□ 1.43
TRIM28-204ENST00000594806 CNRIP1Q96F85 164 aaPredicted RBP23.96■■□□□ 1.43
TRIM28-204ENST00000594806 CNPPD1Q9BV87 410 aa23.96■■□□□ 1.43
TRIM28-204ENST00000594806 MFRPQ9BY79 579 aa23.96■■□□□ 1.43
TRIM28-204ENST00000594806 SLAMF7Q9NQ25 335 aa23.96■■□□□ 1.43
TRIM28-204ENST00000594806 TRAV17A0A0B4J275 112 aa23.95■■□□□ 1.42
TRIM28-204ENST00000594806 PEX11AO75192 247 aa23.95■■□□□ 1.42
TRIM28-204ENST00000594806 PRPS2P11908 318 aa23.95■■□□□ 1.42
TRIM28-204ENST00000594806 SDC1P18827 310 aa23.95■■□□□ 1.42
TRIM28-204ENST00000594806 NT5EP21589 574 aa23.95■■□□□ 1.42
TRIM28-204ENST00000594806 FEN1P39748 380 aaKnown RBP23.95■■□□□ 1.42
TRIM28-204ENST00000594806 TNFSF10P50591 281 aa23.95■■□□□ 1.42
TRIM28-204ENST00000594806 HK2P52789 917 aa23.95■■□□□ 1.42
TRIM28-204ENST00000594806 ERVK-8P63133 956 aa23.95■■□□□ 1.42
TRIM28-204ENST00000594806 RNF4P78317 190 aa23.95■■□□□ 1.42
TRIM28-204ENST00000594806 OCRLQ01968 901 aa23.95■■□□□ 1.42
TRIM28-204ENST00000594806 FUT7Q11130 342 aa23.95■■□□□ 1.42
TRIM28-204ENST00000594806 MAP4K2Q12851 820 aa23.95■■□□□ 1.42
TRIM28-204ENST00000594806 ZNF169Q14929 603 aaPredicted RBP23.95■■□□□ 1.42
TRIM28-204ENST00000594806 PDCD2Q16342 344 aaPredicted RBP23.95■■□□□ 1.42
TRIM28-204ENST00000594806 HORMAD2Q8N7B1 307 aa23.95■■□□□ 1.42
TRIM28-204ENST00000594806 OR7G1Q8NGA0 311 aa23.95■■□□□ 1.42
TRIM28-204ENST00000594806 SUN3Q8TAQ9 357 aa23.95■■□□□ 1.42
TRIM28-204ENST00000594806 ZNF75CPQ92670 426 aaPredicted RBP23.95■■□□□ 1.42
TRIM28-204ENST00000594806 ERP27Q96DN0 273 aa23.95■■□□□ 1.42
TRIM28-204ENST00000594806 UTP23Q9BRU9 249 aaKnown RBP23.95■■□□□ 1.42
TRIM28-204ENST00000594806 ZNF446Q9NWS9 450 aa23.95■■□□□ 1.42
TRIM28-204ENST00000594806 ERVK-19Q9WJR5 959 aa23.95■■□□□ 1.42
TRIM28-204ENST00000594806 YARS2Q9Y2Z4 477 aaKnown RBP23.95■■□□□ 1.42
TRIM28-204ENST00000594806 BOD1L1Q8NFC6 3051 aa23.95■■□□□ 1.42
TRIM28-204ENST00000594806 BSNQ9UPA5 3926 aa23.94■■□□□ 1.42
TRIM28-204ENST00000594806 ATP6AP2A0A1C7CYW4 349 aa23.94■■□□□ 1.42
TRIM28-204ENST00000594806 GABRR3A8MPY1 467 aa23.94■■□□□ 1.42
TRIM28-204ENST00000594806 ATP8B1O43520 1251 aa23.94■■□□□ 1.42
TRIM28-204ENST00000594806 TBX19O60806 448 aa23.94■■□□□ 1.42
TRIM28-204ENST00000594806 ATP6AP2O75787 350 aa23.94■■□□□ 1.42
TRIM28-204ENST00000594806 SORBS2O94875 1100 aaKnown RBP23.94■■□□□ 1.42
TRIM28-204ENST00000594806 BCKDHAP12694 445 aa23.94■■□□□ 1.42
TRIM28-204ENST00000594806 TACR1P25103 407 aa23.94■■□□□ 1.42
TRIM28-204ENST00000594806 MPIP34949 423 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms