RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 ACOT9Q9Y305 439 aa22.02■■□□□ 1.12
LSM4-202ENST00000593564 L3MBTL1Q9Y468 752 aa22.02■■□□□ 1.12
LSM4-202ENST00000593564 ANGPTL3Q9Y5C1 460 aa22.02■■□□□ 1.12
LSM4-202ENST00000593564 NF1P21359 2839 aa22.02■■□□□ 1.11
LSM4-202ENST00000593564 H0YIV9 168 aa22.01■■□□□ 1.11
LSM4-202ENST00000593564 OR10H2O60403 315 aa22.01■■□□□ 1.11
LSM4-202ENST00000593564 ZWINTO95229 277 aa22.01■■□□□ 1.11
LSM4-202ENST00000593564 GPR75O95800 540 aa22.01■■□□□ 1.11
LSM4-202ENST00000593564 PTX3P26022 381 aaPredicted RBP22.01■■□□□ 1.11
LSM4-202ENST00000593564 SERPINB3P29508 390 aa22.01■■□□□ 1.11
LSM4-202ENST00000593564 PLTPP55058 493 aa22.01■■□□□ 1.11
LSM4-202ENST00000593564 DLX5P56178 289 aa22.01■■□□□ 1.11
LSM4-202ENST00000593564 RPS13P62277 151 aaKnown RBP22.01■■□□□ 1.11
LSM4-202ENST00000593564 PHEXP78562 749 aa22.01■■□□□ 1.11
LSM4-202ENST00000593564 CAV1Q03135 178 aa22.01■■□□□ 1.11
LSM4-202ENST00000593564 ZNF267Q14586 743 aaPredicted RBP22.01■■□□□ 1.11
LSM4-202ENST00000593564 SETDB1Q15047 1291 aa22.01■■□□□ 1.11
LSM4-202ENST00000593564 EBPQ15125 230 aaKnown RBP22.01■■□□□ 1.11
LSM4-202ENST00000593564 RNF111Q6ZNA4 994 aa22.01■■□□□ 1.11
LSM4-202ENST00000593564 CENPLQ8N0S6 344 aaPredicted RBP22.01■■□□□ 1.11
LSM4-202ENST00000593564 FAM13CQ8NE31 585 aa22.01■■□□□ 1.11
LSM4-202ENST00000593564 FBF1Q8TES7 1133 aa22.01■■□□□ 1.11
LSM4-202ENST00000593564 DOK4Q8TEW6 326 aa22.01■■□□□ 1.11
LSM4-202ENST00000593564 REPS1Q96D71 796 aa22.01■■□□□ 1.11
LSM4-202ENST00000593564 GAL3ST4Q96RP7 486 aa22.01■■□□□ 1.11
LSM4-202ENST00000593564 WWTR1Q9GZV5 400 aa22.01■■□□□ 1.11
LSM4-202ENST00000593564 ACTR8Q9H981 624 aa22.01■■□□□ 1.11
LSM4-202ENST00000593564 LYARQ9NX58 379 aaKnown RBP22.01■■□□□ 1.11
LSM4-202ENST00000593564 B4GALT7Q9UBV7 327 aa22.01■■□□□ 1.11
LSM4-202ENST00000593564 ASB4Q9Y574 426 aa22.01■■□□□ 1.11
LSM4-202ENST00000593564 ANKHD1Q8IWZ3 2542 aaKnown RBP22.01■■□□□ 1.11
LSM4-202ENST00000593564 A0A0A6YYD5 115 aa22■■□□□ 1.11
LSM4-202ENST00000593564 OR6C76A6NM76 312 aa22■■□□□ 1.11
LSM4-202ENST00000593564 TMPRSS11DO60235 418 aa22■■□□□ 1.11
LSM4-202ENST00000593564 UGDHO60701 494 aa22■■□□□ 1.11
LSM4-202ENST00000593564 EEDO75530 441 aaKnown RBP22■■□□□ 1.11
LSM4-202ENST00000593564 NR2F6P10588 404 aa22■■□□□ 1.11
LSM4-202ENST00000593564 GALNSP34059 522 aa22■■□□□ 1.11
LSM4-202ENST00000593564 MAGEA4P43358 317 aa22■■□□□ 1.11
LSM4-202ENST00000593564 ART1P52961 327 aa22■■□□□ 1.11
LSM4-202ENST00000593564 SLC37A1P57057 533 aa22■■□□□ 1.11
LSM4-202ENST00000593564 NTRK2Q16620 822 aa22■■□□□ 1.11
LSM4-202ENST00000593564 NEIL3Q8TAT5 605 aa22■■□□□ 1.11
LSM4-202ENST00000593564 FBXO25Q8TCJ0 367 aa22■■□□□ 1.11
LSM4-202ENST00000593564 KCTD4Q8WVF5 259 aa22■■□□□ 1.11
LSM4-202ENST00000593564 RIT1Q92963 219 aa22■■□□□ 1.11
LSM4-202ENST00000593564 DDX31Q9H8H2 851 aaKnown RBP22■■□□□ 1.11
LSM4-202ENST00000593564 ALKBH4Q9NXW9 302 aa22■■□□□ 1.11
LSM4-202ENST00000593564 CNOT11Q9UKZ1 510 aaKnown RBP22■■□□□ 1.11
LSM4-202ENST00000593564 UTP11Q9Y3A2 253 aaKnown RBP22■■□□□ 1.11
LSM4-202ENST00000593564 ITPR3Q14573 2671 aa21.99■■□□□ 1.11
LSM4-202ENST00000593564 A0A087X1B8 175 aa21.99■■□□□ 1.11
LSM4-202ENST00000593564 DNAJA1P31689 397 aaKnown RBP21.99■■□□□ 1.11
LSM4-202ENST00000593564 BSGP35613 385 aa21.99■■□□□ 1.11
LSM4-202ENST00000593564 CUL3Q13618 768 aa21.99■■□□□ 1.11
LSM4-202ENST00000593564 PFKFB4Q16877 469 aa21.99■■□□□ 1.11
LSM4-202ENST00000593564 FAM83EQ2M2I3 478 aa21.99■■□□□ 1.11
LSM4-202ENST00000593564 CCDC25Q86WR0 208 aa21.99■■□□□ 1.11
LSM4-202ENST00000593564 ULK2Q8IYT8 1036 aa21.99■■□□□ 1.11
LSM4-202ENST00000593564 DOHHQ9BU89 302 aa21.99■■□□□ 1.11
LSM4-202ENST00000593564 SLC6A15Q9H2J7 730 aa21.99■■□□□ 1.11
LSM4-202ENST00000593564 PSD3Q9NYI0 1048 aa21.99■■□□□ 1.11
LSM4-202ENST00000593564 A0A1W2PR48 441 aa21.98■■□□□ 1.11
LSM4-202ENST00000593564 WASHC1A8K0Z3 465 aa21.98■■□□□ 1.11
LSM4-202ENST00000593564 CLPSP04118 112 aa21.98■■□□□ 1.11
LSM4-202ENST00000593564 FAM58BPP0C7Q3 252 aa21.98■■□□□ 1.11
LSM4-202ENST00000593564 SLC35E2P0CK97 266 aa21.98■■□□□ 1.11
LSM4-202ENST00000593564 GFAPP14136 432 aa21.98■■□□□ 1.11
LSM4-202ENST00000593564 ALDH18A1P54886 795 aaKnown RBP21.98■■□□□ 1.11
LSM4-202ENST00000593564 IRF9Q00978 393 aa21.98■■□□□ 1.11
LSM4-202ENST00000593564 C2orf54Q08AI8 447 aa21.98■■□□□ 1.11
LSM4-202ENST00000593564 PCBP2Q15366 365 aaKnown RBP eCLIP21.98■■□□□ 1.11
LSM4-202ENST00000593564 TBCELQ5QJ74 424 aa21.98■■□□□ 1.11
LSM4-202ENST00000593564 CYP20A1Q6UW02 462 aa21.98■■□□□ 1.11
LSM4-202ENST00000593564 ARSKQ6UWY0 536 aa21.98■■□□□ 1.11
LSM4-202ENST00000593564 WDR53Q7Z5U6 358 aaPredicted RBP21.98■■□□□ 1.11
LSM4-202ENST00000593564 TAGAPQ8N103 731 aa21.98■■□□□ 1.11
LSM4-202ENST00000593564 WDR41Q9HAD4 459 aa21.98■■□□□ 1.11
LSM4-202ENST00000593564 PYCARDQ9ULZ3 195 aa21.98■■□□□ 1.11
LSM4-202ENST00000593564 ANKRD33BA6NCL7 494 aa21.97■■□□□ 1.11
LSM4-202ENST00000593564 GLOD5A6NK44 160 aa21.97■■□□□ 1.11
LSM4-202ENST00000593564 TRIM3O75382 744 aaPredicted RBP21.97■■□□□ 1.11
LSM4-202ENST00000593564 AIFM1O95831 613 aa21.97■■□□□ 1.11
LSM4-202ENST00000593564 C2P06681 752 aa21.97■■□□□ 1.11
LSM4-202ENST00000593564 ACAP2Q15057 778 aa21.97■■□□□ 1.11
LSM4-202ENST00000593564 CPSF6Q16630 551 aaKnown RBP eCLIP21.97■■□□□ 1.11
LSM4-202ENST00000593564 ZDHHC24Q6UX98 284 aa21.97■■□□□ 1.11
LSM4-202ENST00000593564 LIX1Q8N485 282 aa21.97■■□□□ 1.11
LSM4-202ENST00000593564 ZNF441Q8N8Z8 693 aa21.97■■□□□ 1.11
LSM4-202ENST00000593564 L3MBTL4Q8NA19 623 aa21.97■■□□□ 1.11
LSM4-202ENST00000593564 NRGNQ92686 78 aa21.97■■□□□ 1.11
LSM4-202ENST00000593564 ZNF597Q96LX8 424 aa21.97■■□□□ 1.11
LSM4-202ENST00000593564 JSRP1Q96MG2 331 aaPredicted RBP21.97■■□□□ 1.11
LSM4-202ENST00000593564 RAB17Q9H0T7 212 aa21.97■■□□□ 1.11
LSM4-202ENST00000593564 IPPKQ9H8X2 491 aa21.97■■□□□ 1.11
LSM4-202ENST00000593564 LRRC14BA6NHZ5 514 aa21.96■■□□□ 1.11
LSM4-202ENST00000593564 HSPB2A8KAH6 182 aa21.96■■□□□ 1.11
LSM4-202ENST00000593564 FOXE1O00358 373 aaPredicted RBP21.96■■□□□ 1.11
LSM4-202ENST00000593564 CTAG2O75638 210 aa21.96■■□□□ 1.11
LSM4-202ENST00000593564 LRATO95237 230 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms