RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 RNF111Q6ZNA4 994 aa15.02■□□□□ -0
LIG1-205ENST00000593425 SLC29A4Q7RTT9 530 aa15.02■□□□□ -0
LIG1-205ENST00000593425 DND1Q8IYX4 353 aaKnown RBP15.02■□□□□ -0
LIG1-205ENST00000593425 ZCCHC7Q8N3Z6 543 aaKnown RBP15.02■□□□□ -0
LIG1-205ENST00000593425 LIX1Q8N485 282 aa15.02■□□□□ -0
LIG1-205ENST00000593425 TNIP2Q8NFZ5 429 aa15.02■□□□□ -0
LIG1-205ENST00000593425 STAG3L4Q8TBR4 150 aa15.02■□□□□ -0
LIG1-205ENST00000593425 TANKQ92844 425 aa15.02■□□□□ -0
LIG1-205ENST00000593425 RGMAQ96B86 450 aa15.02■□□□□ -0
LIG1-205ENST00000593425 MTERF1Q99551 399 aaKnown RBP15.02■□□□□ -0
LIG1-205ENST00000593425 DOHHQ9BU89 302 aa15.02■□□□□ -0
LIG1-205ENST00000593425 DPH5Q9H2P9 285 aa15.02■□□□□ -0
LIG1-205ENST00000593425 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.02■□□□□ -0
LIG1-205ENST00000593425 QPCTLQ9NXS2 382 aa15.02■□□□□ -0
LIG1-205ENST00000593425 CNIH4Q9P003 139 aa15.02■□□□□ -0
LIG1-205ENST00000593425 PLEKHA6Q9Y2H5 1048 aa15.02■□□□□ -0
LIG1-205ENST00000593425 PCDHGB3Q9Y5G1 929 aa15.02■□□□□ -0
LIG1-205ENST00000593425 IQANK1A0A1B0GTG1 560 aa15.01□□□□□ -0.01
LIG1-205ENST00000593425 GLOD5A6NK44 160 aa15.01□□□□□ -0.01
LIG1-205ENST00000593425 HSPB2A8KAH6 182 aa15.01□□□□□ -0.01
LIG1-205ENST00000593425 PROM1O43490 865 aa15.01□□□□□ -0.01
LIG1-205ENST00000593425 KERAO60938 352 aa15.01□□□□□ -0.01
LIG1-205ENST00000593425 EEDO75530 441 aaKnown RBP15.01□□□□□ -0.01
LIG1-205ENST00000593425 HOXB4P17483 251 aaPredicted RBP15.01□□□□□ -0.01
LIG1-205ENST00000593425 KLK2P20151 261 aa15.01□□□□□ -0.01
LIG1-205ENST00000593425 BMP5P22003 454 aa15.01□□□□□ -0.01
LIG1-205ENST00000593425 GDF1P27539 372 aa15.01□□□□□ -0.01
LIG1-205ENST00000593425 SERPINB3P29508 390 aa15.01□□□□□ -0.01
LIG1-205ENST00000593425 ASCL1P50553 236 aa15.01□□□□□ -0.01
LIG1-205ENST00000593425 GPX6P59796 221 aa15.01□□□□□ -0.01
LIG1-205ENST00000593425 RPS13P62277 151 aaKnown RBP15.01□□□□□ -0.01
LIG1-205ENST00000593425 CRYZQ08257 329 aaKnown RBP15.01□□□□□ -0.01
LIG1-205ENST00000593425 DUSP8Q13202 625 aa15.01□□□□□ -0.01
LIG1-205ENST00000593425 BIKQ13323 160 aa15.01□□□□□ -0.01
LIG1-205ENST00000593425 SLMAPQ14BN4 828 aa15.01□□□□□ -0.01
LIG1-205ENST00000593425 HSPB2Q16082 182 aa15.01□□□□□ -0.01
LIG1-205ENST00000593425 ACSF3Q4G176 576 aaPredicted RBP15.01□□□□□ -0.01
LIG1-205ENST00000593425 FLYWCH1Q4VC44 716 aa15.01□□□□□ -0.01
LIG1-205ENST00000593425 BICRALQ6AI39 1079 aa15.01□□□□□ -0.01
LIG1-205ENST00000593425 POMZP3Q6PJE2 187 aa15.01□□□□□ -0.01
LIG1-205ENST00000593425 TMEM64Q6YI46 380 aa15.01□□□□□ -0.01
LIG1-205ENST00000593425 CDC20BQ86Y33 519 aa15.01□□□□□ -0.01
LIG1-205ENST00000593425 CHDHQ8NE62 594 aaPredicted RBP15.01□□□□□ -0.01
LIG1-205ENST00000593425 UCN3Q969E3 161 aa15.01□□□□□ -0.01
LIG1-205ENST00000593425 RMND5BQ96G75 393 aaPredicted RBP15.01□□□□□ -0.01
LIG1-205ENST00000593425 SAR1BQ9Y6B6 198 aa15.01□□□□□ -0.01
LIG1-205ENST00000593425 A0A0A6YYD5 115 aa15□□□□□ -0.01
LIG1-205ENST00000593425 C15orf38-AP3S2A0A0A6YYH1 394 aa15□□□□□ -0.01
LIG1-205ENST00000593425 A0A1W2PR48 441 aa15□□□□□ -0.01
LIG1-205ENST00000593425 A0A1W2PS29 197 aa15□□□□□ -0.01
LIG1-205ENST00000593425 A6NNC1 897 aa15□□□□□ -0.01
LIG1-205ENST00000593425 SYT5O00445 386 aa15□□□□□ -0.01
LIG1-205ENST00000593425 TMPRSS11DO60235 418 aa15□□□□□ -0.01
LIG1-205ENST00000593425 OR10H2O60403 315 aa15□□□□□ -0.01
LIG1-205ENST00000593425 TRIM3O75382 744 aaPredicted RBP15□□□□□ -0.01
LIG1-205ENST00000593425 GPR75O95800 540 aa15□□□□□ -0.01
LIG1-205ENST00000593425 MTHFD2P13995 350 aa15□□□□□ -0.01
LIG1-205ENST00000593425 EPB42P16452 691 aa15□□□□□ -0.01
LIG1-205ENST00000593425 TLX1P31314 330 aaPredicted RBP15□□□□□ -0.01
LIG1-205ENST00000593425 CEACAM8P31997 349 aaPredicted RBP15□□□□□ -0.01
LIG1-205ENST00000593425 SPRP35270 261 aaPredicted RBP15□□□□□ -0.01
LIG1-205ENST00000593425 BUD31P41223 144 aaPredicted RBP15□□□□□ -0.01
LIG1-205ENST00000593425 PIK3CBP42338 1070 aa15□□□□□ -0.01
LIG1-205ENST00000593425 FOXD4Q12950 439 aaPredicted RBP15□□□□□ -0.01
LIG1-205ENST00000593425 KBTBD12Q3ZCT8 623 aa15□□□□□ -0.01
LIG1-205ENST00000593425 MRM1Q6IN84 353 aaKnown RBP15□□□□□ -0.01
LIG1-205ENST00000593425 RAPH1Q70E73 1250 aa15□□□□□ -0.01
LIG1-205ENST00000593425 MYLK4Q86YV6 388 aaPredicted RBP15□□□□□ -0.01
LIG1-205ENST00000593425 CTAGE3PQ8IX95 158 aa15□□□□□ -0.01
LIG1-205ENST00000593425 TEX9Q8N6V9 391 aa15□□□□□ -0.01
LIG1-205ENST00000593425 ZNF441Q8N8Z8 693 aa15□□□□□ -0.01
LIG1-205ENST00000593425 DIO2Q92813 273 aa15□□□□□ -0.01
LIG1-205ENST00000593425 RIT1Q92963 219 aa15□□□□□ -0.01
LIG1-205ENST00000593425 ZNF597Q96LX8 424 aa15□□□□□ -0.01
LIG1-205ENST00000593425 PELOQ9BRX2 385 aaKnown RBP15□□□□□ -0.01
LIG1-205ENST00000593425 NMRAL1Q9HBL8 299 aa15□□□□□ -0.01
LIG1-205ENST00000593425 ADGRE2Q9UHX3 823 aa15□□□□□ -0.01
LIG1-205ENST00000593425 CBLCQ9ULV8 474 aa15□□□□□ -0.01
LIG1-205ENST00000593425 ASB4Q9Y574 426 aa15□□□□□ -0.01
LIG1-205ENST00000593425 ITPR3Q14573 2671 aa15□□□□□ -0.01
LIG1-205ENST00000593425 MTORP42345 2549 aa14.99□□□□□ -0.01
LIG1-205ENST00000593425 OR6C76A6NM76 312 aa14.99□□□□□ -0.01
LIG1-205ENST00000593425 DVL2O14641 736 aa14.99□□□□□ -0.01
LIG1-205ENST00000593425 EIF3HO15372 352 aaKnown RBP eCLIP14.99□□□□□ -0.01
LIG1-205ENST00000593425 AIFM1O95831 613 aa14.99□□□□□ -0.01
LIG1-205ENST00000593425 EPPINO95925 133 aa14.99□□□□□ -0.01
LIG1-205ENST00000593425 LTA4HP09960 611 aaKnown RBP14.99□□□□□ -0.01
LIG1-205ENST00000593425 NR2F6P10588 404 aa14.99□□□□□ -0.01
LIG1-205ENST00000593425 TACR1P25103 407 aa14.99□□□□□ -0.01
LIG1-205ENST00000593425 SSTR4P31391 388 aa14.99□□□□□ -0.01
LIG1-205ENST00000593425 BSGP35613 385 aa14.99□□□□□ -0.01
LIG1-205ENST00000593425 PAFAH1B1P43034 410 aa14.99□□□□□ -0.01
LIG1-205ENST00000593425 ZNF136P52737 540 aa14.99□□□□□ -0.01
LIG1-205ENST00000593425 FBXW4P57775 412 aa14.99□□□□□ -0.01
LIG1-205ENST00000593425 GNG11P61952 73 aa14.99□□□□□ -0.01
LIG1-205ENST00000593425 PPP2R2AP63151 447 aa14.99□□□□□ -0.01
LIG1-205ENST00000593425 FBXL19-AS1Q494R0 122 aa14.99□□□□□ -0.01
LIG1-205ENST00000593425 GRTP1Q5TC63 336 aa14.99□□□□□ -0.01
LIG1-205ENST00000593425 C3orf62Q6ZUJ4 267 aa14.99□□□□□ -0.01
LIG1-205ENST00000593425 CYS1Q717R9 158 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms