RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 LYPD8Q6UX82 237 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 RNF175Q8N4F7 328 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 SARAFQ96BY9 339 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 NTMT1Q9BV86 223 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 CNPPD1Q9BV87 410 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 ERVK-6Q9BXR3 956 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 WWTR1Q9GZV5 400 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 ZNF703Q9H7S9 590 aaPredicted RBP12.25□□□□□ -0.45
APOC1-209ENST00000592885 KCNJ16Q9NPI9 418 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 TUBA8Q9NY65 449 aaPredicted RBP12.25□□□□□ -0.45
APOC1-209ENST00000592885 NINJ2Q9NZG7 142 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 CPSF2Q9P2I0 782 aaKnown RBP12.25□□□□□ -0.45
APOC1-209ENST00000592885 ADAM29Q9UKF5 820 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 ERVK-19Q9WJR5 959 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 PCDHGB3Q9Y5G1 929 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 LIPGQ9Y5X9 500 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 PDZD2O15018 2839 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 DNAJC13O75165 2243 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 CAPN14A8MX76 684 aa12.24□□□□□ -0.45
APOC1-209ENST00000592885 G3V3Y1 287 aa12.24□□□□□ -0.45
APOC1-209ENST00000592885 TMPRSS11DO60235 418 aa12.24□□□□□ -0.45
APOC1-209ENST00000592885 EEDO75530 441 aaKnown RBP12.24□□□□□ -0.45
APOC1-209ENST00000592885 AIFM1O95831 613 aa12.24□□□□□ -0.45
APOC1-209ENST00000592885 INHBAP08476 426 aa12.24□□□□□ -0.45
APOC1-209ENST00000592885 COL6A2P12110 1019 aa12.24□□□□□ -0.45
APOC1-209ENST00000592885 GABRA1P14867 456 aa12.24□□□□□ -0.45
APOC1-209ENST00000592885 CNTFP26441 200 aa12.24□□□□□ -0.45
APOC1-209ENST00000592885 NUP107P57740 925 aa12.24□□□□□ -0.45
APOC1-209ENST00000592885 KCNJ2P63252 427 aa12.24□□□□□ -0.45
APOC1-209ENST00000592885 SLC7A5Q01650 507 aa12.24□□□□□ -0.45
APOC1-209ENST00000592885 TLE4Q04727 773 aa12.24□□□□□ -0.45
APOC1-209ENST00000592885 TFF3Q07654 80 aa12.24□□□□□ -0.45
APOC1-209ENST00000592885 SLC10A1Q14973 349 aa12.24□□□□□ -0.45
APOC1-209ENST00000592885 NTRK2Q16620 822 aa12.24□□□□□ -0.45
APOC1-209ENST00000592885 WHAMMP3Q1A5X7 153 aa12.24□□□□□ -0.45
APOC1-209ENST00000592885 GGTA1PQ4G0N0 100 aa12.24□□□□□ -0.45
APOC1-209ENST00000592885 WLSQ5T9L3 541 aa12.24□□□□□ -0.45
APOC1-209ENST00000592885 ADGRD1Q6QNK2 874 aa12.24□□□□□ -0.45
APOC1-209ENST00000592885 B3GNT6Q6ZMB0 384 aa12.24□□□□□ -0.45
APOC1-209ENST00000592885 DGAT2L6Q6ZPD8 337 aa12.24□□□□□ -0.45
APOC1-209ENST00000592885 TAGAPQ8N103 731 aa12.24□□□□□ -0.45
APOC1-209ENST00000592885 PTGR2Q8N8N7 351 aaPredicted RBP12.24□□□□□ -0.45
APOC1-209ENST00000592885 SLC44A1Q8WWI5 657 aa12.24□□□□□ -0.45
APOC1-209ENST00000592885 RIT1Q92963 219 aa12.24□□□□□ -0.45
APOC1-209ENST00000592885 TP53INP1Q96A56 240 aa12.24□□□□□ -0.45
APOC1-209ENST00000592885 PPWD1Q96BP3 646 aaKnown RBP12.24□□□□□ -0.45
APOC1-209ENST00000592885 GAL3ST4Q96RP7 486 aa12.24□□□□□ -0.45
APOC1-209ENST00000592885 LRRC1Q9BTT6 524 aa12.24□□□□□ -0.45
APOC1-209ENST00000592885 VPS11Q9H270 941 aa12.24□□□□□ -0.45
APOC1-209ENST00000592885 ZFP64Q9NPA5 681 aa12.24□□□□□ -0.45
APOC1-209ENST00000592885 PNPLA3Q9NST1 481 aa12.24□□□□□ -0.45
APOC1-209ENST00000592885 B4GALT7Q9UBV7 327 aa12.24□□□□□ -0.45
APOC1-209ENST00000592885 RNF11Q9Y3C5 154 aa12.24□□□□□ -0.45
APOC1-209ENST00000592885 CHCHD2Q9Y6H1 151 aaPredicted RBP12.24□□□□□ -0.45
APOC1-209ENST00000592885 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.24□□□□□ -0.45
APOC1-209ENST00000592885 TRGV5A0A0B4J1U4 118 aa12.23□□□□□ -0.45
APOC1-209ENST00000592885 A0A1W2PR48 441 aa12.23□□□□□ -0.45
APOC1-209ENST00000592885 ANKRD33BA6NCL7 494 aa12.23□□□□□ -0.45
APOC1-209ENST00000592885 LRRC14BA6NHZ5 514 aa12.23□□□□□ -0.45
APOC1-209ENST00000592885 FAM90A27PA6NNH2 459 aa12.23□□□□□ -0.45
APOC1-209ENST00000592885 HRKO00198 91 aa12.23□□□□□ -0.45
APOC1-209ENST00000592885 SMIM24O75264 130 aa12.23□□□□□ -0.45
APOC1-209ENST00000592885 PRKRAO75569 313 aaKnown RBP12.23□□□□□ -0.45
APOC1-209ENST00000592885 KRT38O76015 456 aa12.23□□□□□ -0.45
APOC1-209ENST00000592885 TOXO94900 526 aa12.23□□□□□ -0.45
APOC1-209ENST00000592885 SIX3O95343 332 aaPredicted RBP12.23□□□□□ -0.45
APOC1-209ENST00000592885 PIGAP37287 484 aa12.23□□□□□ -0.45
APOC1-209ENST00000592885 ARL1P40616 181 aaPredicted RBP12.23□□□□□ -0.45
APOC1-209ENST00000592885 TMED10P49755 219 aaKnown RBP12.23□□□□□ -0.45
APOC1-209ENST00000592885 CCNG1P51959 295 aa12.23□□□□□ -0.45
APOC1-209ENST00000592885 PMPCAQ10713 525 aa12.23□□□□□ -0.45
APOC1-209ENST00000592885 ZNF267Q14586 743 aaPredicted RBP12.23□□□□□ -0.45
APOC1-209ENST00000592885 C6orf163Q5TEZ5 329 aa12.23□□□□□ -0.45
APOC1-209ENST00000592885 FRG2Q64ET8 278 aa12.23□□□□□ -0.45
APOC1-209ENST00000592885 PAGE2Q7Z2X7 111 aa12.23□□□□□ -0.45
APOC1-209ENST00000592885 LRRC25Q8N386 305 aaPredicted RBP12.23□□□□□ -0.45
APOC1-209ENST00000592885 RPRMLQ8N4K4 120 aa12.23□□□□□ -0.45
APOC1-209ENST00000592885 ZNF441Q8N8Z8 693 aa12.23□□□□□ -0.45
APOC1-209ENST00000592885 SREK1Q8WXA9 508 aaKnown RBP12.23□□□□□ -0.45
APOC1-209ENST00000592885 ATP6V1E2Q96A05 226 aa12.23□□□□□ -0.45
APOC1-209ENST00000592885 MRRFQ96E11 262 aaKnown RBP12.23□□□□□ -0.45
APOC1-209ENST00000592885 FRG2BQ96QU4 278 aa12.23□□□□□ -0.45
APOC1-209ENST00000592885 SECISBP2Q96T21 854 aaKnown RBP12.23□□□□□ -0.45
APOC1-209ENST00000592885 TTYH2Q9BSA4 534 aa12.23□□□□□ -0.45
APOC1-209ENST00000592885 CDC42EP4Q9H3Q1 356 aaKnown RBP12.23□□□□□ -0.45
APOC1-209ENST00000592885 LDAHQ9H6V9 325 aa12.23□□□□□ -0.45
APOC1-209ENST00000592885 NOL11Q9H8H0 719 aaKnown RBP12.23□□□□□ -0.45
APOC1-209ENST00000592885 ACKR4Q9NPB9 350 aa12.23□□□□□ -0.45
APOC1-209ENST00000592885 AHSPQ9NZD4 102 aa12.23□□□□□ -0.45
APOC1-209ENST00000592885 ZNF180Q9UJW8 692 aa12.23□□□□□ -0.45
APOC1-209ENST00000592885 PCTPQ9UKL6 214 aa12.23□□□□□ -0.45
APOC1-209ENST00000592885 FAM215AQ9Y5M1 114 aa12.23□□□□□ -0.45
APOC1-209ENST00000592885 IKBKGQ9Y6K9 419 aa12.23□□□□□ -0.45
APOC1-209ENST00000592885 CSMD2Q7Z408 3487 aa12.23□□□□□ -0.45
APOC1-209ENST00000592885 EXPH5Q8NEV8 1989 aa12.22□□□□□ -0.45
APOC1-209ENST00000592885 ATP6AP2A0A1C7CYW4 349 aa12.22□□□□□ -0.45
APOC1-209ENST00000592885 NKX2-6A6NCS4 301 aa12.22□□□□□ -0.45
APOC1-209ENST00000592885 OR7A17O14581 309 aa12.22□□□□□ -0.45
APOC1-209ENST00000592885 TP53I11O14683 189 aa12.22□□□□□ -0.45
APOC1-209ENST00000592885 GUCY1B2O75343 617 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms