RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 IMPDH1P20839 514 aa12.83□□□□□ -0.36
APOC1-208ENST00000592535 ATP5F1P24539 256 aaPredicted RBP12.83□□□□□ -0.36
APOC1-208ENST00000592535 PIK3R1P27986 724 aa12.83□□□□□ -0.36
APOC1-208ENST00000592535 NR0B1P51843 470 aaKnown RBP12.83□□□□□ -0.36
APOC1-208ENST00000592535 MAPK12P53778 367 aa12.83□□□□□ -0.36
APOC1-208ENST00000592535 ADORA2A-AS1P86434 159 aa12.83□□□□□ -0.36
APOC1-208ENST00000592535 TBL3Q12788 808 aaKnown RBP12.83□□□□□ -0.36
APOC1-208ENST00000592535 MPEG1Q2M385 716 aa12.83□□□□□ -0.36
APOC1-208ENST00000592535 NDUFAF5Q5TEU4 345 aa12.83□□□□□ -0.36
APOC1-208ENST00000592535 MTFR2Q6P444 385 aa12.83□□□□□ -0.36
APOC1-208ENST00000592535 LYPD8Q6UX82 237 aa12.83□□□□□ -0.36
APOC1-208ENST00000592535 BNC2Q6ZN30 1099 aaPredicted RBP12.83□□□□□ -0.36
APOC1-208ENST00000592535 RNF111Q6ZNA4 994 aa12.83□□□□□ -0.36
APOC1-208ENST00000592535 NCCRP1Q6ZVX7 275 aaPredicted RBP12.83□□□□□ -0.36
APOC1-208ENST00000592535 PAGE2Q7Z2X7 111 aa12.83□□□□□ -0.36
APOC1-208ENST00000592535 COMMD6Q7Z4G1 85 aa12.83□□□□□ -0.36
APOC1-208ENST00000592535 ZNF808Q8N4W9 903 aaPredicted RBP12.83□□□□□ -0.36
APOC1-208ENST00000592535 CDYL2Q8N8U2 506 aa12.83□□□□□ -0.36
APOC1-208ENST00000592535 GOLM1Q8NBJ4 401 aa12.83□□□□□ -0.36
APOC1-208ENST00000592535 OR52N2Q8NGI0 321 aa12.83□□□□□ -0.36
APOC1-208ENST00000592535 UBLCP1Q8WVY7 318 aaPredicted RBP12.83□□□□□ -0.36
APOC1-208ENST00000592535 GAL3ST4Q96RP7 486 aa12.83□□□□□ -0.36
APOC1-208ENST00000592535 ZNF382Q96SR6 550 aa12.83□□□□□ -0.36
APOC1-208ENST00000592535 L2HGDHQ9H9P8 463 aa12.83□□□□□ -0.36
APOC1-208ENST00000592535 BRF2Q9HAW0 419 aa12.83□□□□□ -0.36
APOC1-208ENST00000592535 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.83□□□□□ -0.36
APOC1-208ENST00000592535 EMCNQ9ULC0 261 aa12.83□□□□□ -0.36
APOC1-208ENST00000592535 EXPH5Q8NEV8 1989 aa12.83□□□□□ -0.36
APOC1-208ENST00000592535 DNAJC13O75165 2243 aa12.82□□□□□ -0.36
APOC1-208ENST00000592535 NCKAP5O14513 1909 aa12.82□□□□□ -0.36
APOC1-208ENST00000592535 FAM166BA8MTA8 275 aa12.82□□□□□ -0.36
APOC1-208ENST00000592535 CT62P0C5K7 136 aa12.82□□□□□ -0.36
APOC1-208ENST00000592535 CCL3P10147 92 aa12.82□□□□□ -0.36
APOC1-208ENST00000592535 CHN1P15882 459 aa12.82□□□□□ -0.36
APOC1-208ENST00000592535 CNR1P21554 472 aa12.82□□□□□ -0.36
APOC1-208ENST00000592535 SSTR4P31391 388 aa12.82□□□□□ -0.36
APOC1-208ENST00000592535 GALNSP34059 522 aa12.82□□□□□ -0.36
APOC1-208ENST00000592535 DNASE1L1P49184 302 aa12.82□□□□□ -0.36
APOC1-208ENST00000592535 HTR6P50406 440 aa12.82□□□□□ -0.36
APOC1-208ENST00000592535 PRKAA2P54646 552 aa12.82□□□□□ -0.36
APOC1-208ENST00000592535 SLC37A1P57057 533 aa12.82□□□□□ -0.36
APOC1-208ENST00000592535 PLGLB1Q02325 96 aa12.82□□□□□ -0.36
APOC1-208ENST00000592535 EBPQ15125 230 aaKnown RBP12.82□□□□□ -0.36
APOC1-208ENST00000592535 RASA2Q15283 850 aa12.82□□□□□ -0.36
APOC1-208ENST00000592535 ZNF791Q3KP31 576 aaPredicted RBP12.82□□□□□ -0.36
APOC1-208ENST00000592535 RPTNQ6XPR3 784 aa12.82□□□□□ -0.36
APOC1-208ENST00000592535 C3P1Q6ZMU1 363 aa12.82□□□□□ -0.36
APOC1-208ENST00000592535 GPRIN3Q6ZVF9 776 aa12.82□□□□□ -0.36
APOC1-208ENST00000592535 SLC29A4Q7RTT9 530 aa12.82□□□□□ -0.36
APOC1-208ENST00000592535 DOLPP1Q86YN1 238 aa12.82□□□□□ -0.36
APOC1-208ENST00000592535 SLC22A9Q8IVM8 553 aa12.82□□□□□ -0.36
APOC1-208ENST00000592535 MMP21Q8N119 569 aa12.82□□□□□ -0.36
APOC1-208ENST00000592535 C1orf52Q8N6N3 182 aaKnown RBP12.82□□□□□ -0.36
APOC1-208ENST00000592535 EIF1ADQ8N9N8 165 aaKnown RBP12.82□□□□□ -0.36
APOC1-208ENST00000592535 OR4K14Q8NGD5 310 aa12.82□□□□□ -0.36
APOC1-208ENST00000592535 SLC22A8Q8TCC7 542 aa12.82□□□□□ -0.36
APOC1-208ENST00000592535 AGAP11Q8TF27 550 aa12.82□□□□□ -0.36
APOC1-208ENST00000592535 L3HYPDHQ96EM0 354 aa12.82□□□□□ -0.36
APOC1-208ENST00000592535 SGCZQ96LD1 299 aa12.82□□□□□ -0.36
APOC1-208ENST00000592535 PHF12Q96QT6 1004 aa12.82□□□□□ -0.36
APOC1-208ENST00000592535 TTTY12Q9BZ98 90 aa12.82□□□□□ -0.36
APOC1-208ENST00000592535 WWTR1Q9GZV5 400 aa12.82□□□□□ -0.36
APOC1-208ENST00000592535 DEFB127Q9H1M4 99 aa12.82□□□□□ -0.36
APOC1-208ENST00000592535 CXorf21Q9HAI6 301 aa12.82□□□□□ -0.36
APOC1-208ENST00000592535 SACM1LQ9NTJ5 587 aa12.82□□□□□ -0.36
APOC1-208ENST00000592535 MEMO1Q9Y316 297 aa12.82□□□□□ -0.36
APOC1-208ENST00000592535 PCDHA9Q9Y5H5 950 aa12.82□□□□□ -0.36
APOC1-208ENST00000592535 NINQ8N4C6 2090 aa12.82□□□□□ -0.36
APOC1-208ENST00000592535 UNC79Q9P2D8 2635 aa12.81□□□□□ -0.36
APOC1-208ENST00000592535 PRRG2O14669 202 aa12.81□□□□□ -0.36
APOC1-208ENST00000592535 GLRA3O75311 464 aa12.81□□□□□ -0.36
APOC1-208ENST00000592535 PDE9AO76083 593 aa12.81□□□□□ -0.36
APOC1-208ENST00000592535 KRT6AP02538 564 aa12.81□□□□□ -0.36
APOC1-208ENST00000592535 KRT6BP04259 564 aa12.81□□□□□ -0.36
APOC1-208ENST00000592535 CPMP14384 443 aa12.81□□□□□ -0.36
APOC1-208ENST00000592535 GRNP28799 593 aaKnown RBP12.81□□□□□ -0.36
APOC1-208ENST00000592535 HMOX2P30519 316 aa12.81□□□□□ -0.36
APOC1-208ENST00000592535 PTGS2P35354 604 aa12.81□□□□□ -0.36
APOC1-208ENST00000592535 SLCO1A2P46721 670 aa12.81□□□□□ -0.36
APOC1-208ENST00000592535 KRT6CP48668 564 aa12.81□□□□□ -0.36
APOC1-208ENST00000592535 XKP51811 444 aa12.81□□□□□ -0.36
APOC1-208ENST00000592535 PPIAP62937 165 aaKnown RBP12.81□□□□□ -0.36
APOC1-208ENST00000592535 ART3Q13508 389 aa12.81□□□□□ -0.36
APOC1-208ENST00000592535 SP5Q6BEB4 398 aaPredicted RBP12.81□□□□□ -0.36
APOC1-208ENST00000592535 SLC48A1Q6P1K1 146 aa12.81□□□□□ -0.36
APOC1-208ENST00000592535 GK5Q6ZS86 529 aa12.81□□□□□ -0.36
APOC1-208ENST00000592535 FAM47EQ6ZV65 393 aa12.81□□□□□ -0.36
APOC1-208ENST00000592535 SH2D5Q6ZV89 423 aa12.81□□□□□ -0.36
APOC1-208ENST00000592535 GALNT12Q8IXK2 581 aa12.81□□□□□ -0.36
APOC1-208ENST00000592535 FAM57AQ8TBR7 257 aa12.81□□□□□ -0.36
APOC1-208ENST00000592535 METTL6Q8TCB7 284 aa12.81□□□□□ -0.36
APOC1-208ENST00000592535 TM4SF18Q96CE8 201 aa12.81□□□□□ -0.36
APOC1-208ENST00000592535 SPACA9Q96E40 222 aaPredicted RBP12.81□□□□□ -0.36
APOC1-208ENST00000592535 FAM173AQ9BQD7 235 aa12.81□□□□□ -0.36
APOC1-208ENST00000592535 GSTO2Q9H4Y5 243 aa12.81□□□□□ -0.36
APOC1-208ENST00000592535 PLSCR2Q9NRY7 297 aa12.81□□□□□ -0.36
APOC1-208ENST00000592535 DCDC2Q9UHG0 476 aa12.81□□□□□ -0.36
APOC1-208ENST00000592535 CES1P1Q9UKY3 287 aa12.81□□□□□ -0.36
APOC1-208ENST00000592535 CACNA1CQ13936 2221 aa12.81□□□□□ -0.36
APOC1-208ENST00000592535 NBPF19A0A087WUL8 3843 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms