RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 MS4A14Q96JA4 679 aa17.96■□□□□ 0.47
PRKCSH-216ENST00000592445 ERVK-6Q9BXR3 956 aa17.96■□□□□ 0.47
PRKCSH-216ENST00000592445 WWTR1Q9GZV5 400 aa17.96■□□□□ 0.47
PRKCSH-216ENST00000592445 RBSNQ9H1K0 784 aa17.96■□□□□ 0.47
PRKCSH-216ENST00000592445 CNOT10Q9H9A5 744 aaKnown RBP17.96■□□□□ 0.47
PRKCSH-216ENST00000592445 RYDENQ9NUL5 291 aaKnown RBP17.96■□□□□ 0.47
PRKCSH-216ENST00000592445 GALNT8Q9NY28 637 aa17.96■□□□□ 0.47
PRKCSH-216ENST00000592445 ERVK-19Q9WJR5 959 aa17.96■□□□□ 0.47
PRKCSH-216ENST00000592445 ANKRD33BA6NCL7 494 aa17.95■□□□□ 0.46
PRKCSH-216ENST00000592445 CAPN14A8MX76 684 aa17.95■□□□□ 0.46
PRKCSH-216ENST00000592445 SH3BGRLO75368 114 aa17.95■□□□□ 0.46
PRKCSH-216ENST00000592445 BMP7P18075 431 aa17.95■□□□□ 0.46
PRKCSH-216ENST00000592445 SSR2P43308 183 aa17.95■□□□□ 0.46
PRKCSH-216ENST00000592445 BIKQ13323 160 aa17.95■□□□□ 0.46
PRKCSH-216ENST00000592445 LAPTM5Q13571 262 aa17.95■□□□□ 0.46
PRKCSH-216ENST00000592445 ZNF267Q14586 743 aaPredicted RBP17.95■□□□□ 0.46
PRKCSH-216ENST00000592445 PPP1R7Q15435 360 aa17.95■□□□□ 0.46
PRKCSH-216ENST00000592445 PAGE2BQ5JRK9 111 aa17.95■□□□□ 0.46
PRKCSH-216ENST00000592445 HP1BP3Q5SSJ5 553 aaPredicted RBP17.95■□□□□ 0.46
PRKCSH-216ENST00000592445 BICRALQ6AI39 1079 aa17.95■□□□□ 0.46
PRKCSH-216ENST00000592445 TRMT10BQ6PF06 316 aaKnown RBP17.95■□□□□ 0.46
PRKCSH-216ENST00000592445 CAPN12Q6ZSI9 719 aa17.95■□□□□ 0.46
PRKCSH-216ENST00000592445 PACS2Q86VP3 889 aa17.95■□□□□ 0.46
PRKCSH-216ENST00000592445 TCAIMQ8N3R3 496 aa17.95■□□□□ 0.46
PRKCSH-216ENST00000592445 C9orf106Q8NAJ2 232 aa17.95■□□□□ 0.46
PRKCSH-216ENST00000592445 BBOF1Q8ND07 529 aa17.95■□□□□ 0.46
PRKCSH-216ENST00000592445 GRK7Q8WTQ7 553 aa17.95■□□□□ 0.46
PRKCSH-216ENST00000592445 ANKRD49Q8WVL7 239 aa17.95■□□□□ 0.46
PRKCSH-216ENST00000592445 ABTB1Q969K4 478 aaPredicted RBP17.95■□□□□ 0.46
PRKCSH-216ENST00000592445 PIGTQ969N2 578 aa17.95■□□□□ 0.46
PRKCSH-216ENST00000592445 WDYHV1Q96HA8 205 aa17.95■□□□□ 0.46
PRKCSH-216ENST00000592445 RILPQ96NA2 401 aa17.95■□□□□ 0.46
PRKCSH-216ENST00000592445 GNRHR2Q96P88 292 aa17.95■□□□□ 0.46
PRKCSH-216ENST00000592445 EFCAB11Q9BUY7 163 aa17.95■□□□□ 0.46
PRKCSH-216ENST00000592445 UGT2B28Q9BY64 529 aa17.95■□□□□ 0.46
PRKCSH-216ENST00000592445 PHACTR1Q9C0D0 580 aa17.95■□□□□ 0.46
PRKCSH-216ENST00000592445 RPF2Q9H7B2 306 aaKnown RBP17.95■□□□□ 0.46
PRKCSH-216ENST00000592445 COL6A5A8TX70 2615 aa17.95■□□□□ 0.46
PRKCSH-216ENST00000592445 KIAA1549Q9HCM3 1950 aa17.95■□□□□ 0.46
PRKCSH-216ENST00000592445 FBN1P35555 2871 aaKnown RBP17.94■□□□□ 0.46
PRKCSH-216ENST00000592445 INAFM1C9JVW0 142 aa17.94■□□□□ 0.46
PRKCSH-216ENST00000592445 OR10H2O60403 315 aa17.94■□□□□ 0.46
PRKCSH-216ENST00000592445 PRAMEF4O60810 478 aa17.94■□□□□ 0.46
PRKCSH-216ENST00000592445 SNX4O95219 450 aa17.94■□□□□ 0.46
PRKCSH-216ENST00000592445 FREM3P0C091 2139 aa17.94■□□□□ 0.46
PRKCSH-216ENST00000592445 ALOX15P16050 662 aaPredicted RBP17.94■□□□□ 0.46
PRKCSH-216ENST00000592445 FBXW4P57775 412 aa17.94■□□□□ 0.46
PRKCSH-216ENST00000592445 RPS6KA2Q15349 733 aa17.94■□□□□ 0.46
PRKCSH-216ENST00000592445 TGFBIQ15582 683 aa17.94■□□□□ 0.46
PRKCSH-216ENST00000592445 PDK4Q16654 411 aa17.94■□□□□ 0.46
PRKCSH-216ENST00000592445 CYP1B1Q16678 543 aa17.94■□□□□ 0.46
PRKCSH-216ENST00000592445 TMEM35AQ53FP2 167 aa17.94■□□□□ 0.46
PRKCSH-216ENST00000592445 FBXO48Q5FWF7 155 aa17.94■□□□□ 0.46
PRKCSH-216ENST00000592445 NHSL2Q5HYW2 709 aa17.94■□□□□ 0.46
PRKCSH-216ENST00000592445 DCST1Q5T197 706 aa17.94■□□□□ 0.46
PRKCSH-216ENST00000592445 PRAMEF9Q5VWM5 478 aa17.94■□□□□ 0.46
PRKCSH-216ENST00000592445 TMEM64Q6YI46 380 aa17.94■□□□□ 0.46
PRKCSH-216ENST00000592445 TANKQ92844 425 aa17.94■□□□□ 0.46
PRKCSH-216ENST00000592445 VPS39Q96JC1 886 aa17.94■□□□□ 0.46
PRKCSH-216ENST00000592445 PIP5K1AQ99755 562 aa17.94■□□□□ 0.46
PRKCSH-216ENST00000592445 TMEM79Q9BSE2 394 aa17.94■□□□□ 0.46
PRKCSH-216ENST00000592445 MS4A8Q9BY19 250 aa17.94■□□□□ 0.46
PRKCSH-216ENST00000592445 UBQLN3Q9H347 655 aa17.94■□□□□ 0.46
PRKCSH-216ENST00000592445 NDRG3Q9UGV2 375 aa17.94■□□□□ 0.46
PRKCSH-216ENST00000592445 C15orf41Q9Y2V0 281 aa17.94■□□□□ 0.46
PRKCSH-216ENST00000592445 IKBKGQ9Y6K9 419 aa17.94■□□□□ 0.46
PRKCSH-216ENST00000592445 HIVEP2P31629 2446 aa17.93■□□□□ 0.46
PRKCSH-216ENST00000592445 FAM95CA0A1B0GW59 222 aa17.93■□□□□ 0.46
PRKCSH-216ENST00000592445 SAP18O00422 153 aaKnown RBP17.93■□□□□ 0.46
PRKCSH-216ENST00000592445 TAPBPO15533 448 aa17.93■□□□□ 0.46
PRKCSH-216ENST00000592445 CYP4B1P13584 511 aa17.93■□□□□ 0.46
PRKCSH-216ENST00000592445 CD22P20273 847 aa17.93■□□□□ 0.46
PRKCSH-216ENST00000592445 TLX1P31314 330 aaPredicted RBP17.93■□□□□ 0.46
PRKCSH-216ENST00000592445 HSPA7P48741 367 aa17.93■□□□□ 0.46
PRKCSH-216ENST00000592445 TAS2R39P59534 338 aa17.93■□□□□ 0.46
PRKCSH-216ENST00000592445 IRF8Q02556 426 aa17.93■□□□□ 0.46
PRKCSH-216ENST00000592445 FOXF2Q12947 444 aa17.93■□□□□ 0.46
PRKCSH-216ENST00000592445 SLAMF1Q13291 335 aa17.93■□□□□ 0.46
PRKCSH-216ENST00000592445 EBPQ15125 230 aaKnown RBP17.93■□□□□ 0.46
PRKCSH-216ENST00000592445 EIPR1Q53HC9 387 aa17.93■□□□□ 0.46
PRKCSH-216ENST00000592445 WIPI1Q5MNZ9 446 aaPredicted RBP17.93■□□□□ 0.46
PRKCSH-216ENST00000592445 YTHDF3Q7Z739 585 aaKnown RBP17.93■□□□□ 0.46
PRKCSH-216ENST00000592445 ST13P4Q8IZP2 240 aaPredicted RBP17.93■□□□□ 0.46
PRKCSH-216ENST00000592445 NANOS1Q8WY41 292 aaKnown RBP17.93■□□□□ 0.46
PRKCSH-216ENST00000592445 RIT1Q92963 219 aa17.93■□□□□ 0.46
PRKCSH-216ENST00000592445 ESAMQ96AP7 390 aa17.93■□□□□ 0.46
PRKCSH-216ENST00000592445 WDR34Q96EX3 536 aa17.93■□□□□ 0.46
PRKCSH-216ENST00000592445 SFXN3Q9BWM7 321 aa17.93■□□□□ 0.46
PRKCSH-216ENST00000592445 PLAC1Q9HBJ0 212 aa17.93■□□□□ 0.46
PRKCSH-216ENST00000592445 MS4A12Q9NXJ0 267 aa17.93■□□□□ 0.46
PRKCSH-216ENST00000592445 ASIC3Q9UHC3 531 aa17.93■□□□□ 0.46
PRKCSH-216ENST00000592445 TLN2Q9Y4G6 2542 aa17.93■□□□□ 0.46
PRKCSH-216ENST00000592445 OR6C76A6NM76 312 aa17.92■□□□□ 0.46
PRKCSH-216ENST00000592445 STK16O75716 305 aa17.92■□□□□ 0.46
PRKCSH-216ENST00000592445 SCELO95171 688 aa17.92■□□□□ 0.46
PRKCSH-216ENST00000592445 TGFB1P01137 390 aa17.92■□□□□ 0.46
PRKCSH-216ENST00000592445 PCNAP12004 261 aa17.92■□□□□ 0.46
PRKCSH-216ENST00000592445 GGT5P36269 586 aa17.92■□□□□ 0.46
PRKCSH-216ENST00000592445 ELK3P41970 407 aa17.92■□□□□ 0.46
PRKCSH-216ENST00000592445 SLC37A1P57057 533 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms