RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-238ENST00000592412 PAGE2BQ5JRK9 111 aa16.75■□□□□ 0.27
CIRBP-238ENST00000592412 DCST1Q5T197 706 aa16.75■□□□□ 0.27
CIRBP-238ENST00000592412 KHDRBS2Q5VWX1 349 aaKnown RBP16.75■□□□□ 0.27
CIRBP-238ENST00000592412 TMEM64Q6YI46 380 aa16.75■□□□□ 0.27
CIRBP-238ENST00000592412 MAATS1Q7Z4T9 603 aa16.75■□□□□ 0.27
CIRBP-238ENST00000592412 DND1Q8IYX4 353 aaKnown RBP16.75■□□□□ 0.27
CIRBP-238ENST00000592412 LIX1Q8N485 282 aa16.75■□□□□ 0.27
CIRBP-238ENST00000592412 OR7G3Q8NG95 312 aa16.75■□□□□ 0.27
CIRBP-238ENST00000592412 LINC01560Q8TB33 94 aa16.75■□□□□ 0.27
CIRBP-238ENST00000592412 ZNF717Q9BY31 904 aaPredicted RBP16.75■□□□□ 0.27
CIRBP-238ENST00000592412 CD244Q9BZW8 370 aa16.75■□□□□ 0.27
CIRBP-238ENST00000592412 PHACTR1Q9C0D0 580 aa16.75■□□□□ 0.27
CIRBP-238ENST00000592412 SPACA6W5XKT8 324 aa16.75■□□□□ 0.27
CIRBP-238ENST00000592412 A0A1B0GTL3 188 aa16.74■□□□□ 0.27
CIRBP-238ENST00000592412 ANKRD33BA6NCL7 494 aa16.74■□□□□ 0.27
CIRBP-238ENST00000592412 CXorf49A8MYA2 514 aaPredicted RBP16.74■□□□□ 0.27
CIRBP-238ENST00000592412 SEC31AO94979 1220 aaKnown RBP16.74■□□□□ 0.27
CIRBP-238ENST00000592412 PCNAP12004 261 aa16.74■□□□□ 0.27
CIRBP-238ENST00000592412 ALOX15P16050 662 aaPredicted RBP16.74■□□□□ 0.27
CIRBP-238ENST00000592412 SERPINB3P29508 390 aa16.74■□□□□ 0.27
CIRBP-238ENST00000592412 AGFG1P52594 562 aaKnown RBP16.74■□□□□ 0.27
CIRBP-238ENST00000592412 ARL4CP56559 192 aa16.74■□□□□ 0.27
CIRBP-238ENST00000592412 TNFRSF17Q02223 184 aa16.74■□□□□ 0.27
CIRBP-238ENST00000592412 PDIA2Q13087 525 aaKnown RBP16.74■□□□□ 0.27
CIRBP-238ENST00000592412 HIST2H2ACQ16777 129 aaPredicted RBP16.74■□□□□ 0.27
CIRBP-238ENST00000592412 DEPDC1Q5TB30 811 aa16.74■□□□□ 0.27
CIRBP-238ENST00000592412 NSUN5P2Q63ZY6 315 aa16.74■□□□□ 0.27
CIRBP-238ENST00000592412 HIST2H2AA3Q6FI13 130 aa16.74■□□□□ 0.27
CIRBP-238ENST00000592412 OR4C11Q6IEV9 310 aa16.74■□□□□ 0.27
CIRBP-238ENST00000592412 BIVMQ86UB2 503 aa16.74■□□□□ 0.27
CIRBP-238ENST00000592412 ST13P4Q8IZP2 240 aaPredicted RBP16.74■□□□□ 0.27
CIRBP-238ENST00000592412 TANKQ92844 425 aa16.74■□□□□ 0.27
CIRBP-238ENST00000592412 NTNG2Q96CW9 530 aa16.74■□□□□ 0.27
CIRBP-238ENST00000592412 RBM18Q96H35 190 aaKnown RBP16.74■□□□□ 0.27
CIRBP-238ENST00000592412 ART5Q96L15 291 aa16.74■□□□□ 0.27
CIRBP-238ENST00000592412 UBXN10Q96LJ8 280 aa16.74■□□□□ 0.27
CIRBP-238ENST00000592412 ZNF597Q96LX8 424 aa16.74■□□□□ 0.27
CIRBP-238ENST00000592412 EPB41L4BQ9H329 900 aa16.74■□□□□ 0.27
CIRBP-238ENST00000592412 GRPEL1Q9HAV7 217 aa16.74■□□□□ 0.27
CIRBP-238ENST00000592412 CD274Q9NZQ7 290 aa16.74■□□□□ 0.27
CIRBP-238ENST00000592412 JKAMPQ9P055 326 aa16.74■□□□□ 0.27
CIRBP-238ENST00000592412 MTRF1LQ9UGC7 380 aaKnown RBP16.74■□□□□ 0.27
CIRBP-238ENST00000592412 FOXD3Q9UJU5 478 aaPredicted RBP16.74■□□□□ 0.27
CIRBP-238ENST00000592412 EDARQ9UNE0 448 aa16.74■□□□□ 0.27
CIRBP-238ENST00000592412 SLC6A5Q9Y345 797 aa16.74■□□□□ 0.27
CIRBP-238ENST00000592412 IKBKGQ9Y6K9 419 aa16.74■□□□□ 0.27
CIRBP-238ENST00000592412 MED12Q93074 2177 aa16.73■□□□□ 0.27
CIRBP-238ENST00000592412 A0A1W2PS29 197 aa16.73■□□□□ 0.27
CIRBP-238ENST00000592412 TUBAL3A6NHL2 446 aa16.73■□□□□ 0.27
CIRBP-238ENST00000592412 PLPP1O14494 284 aa16.73■□□□□ 0.27
CIRBP-238ENST00000592412 HPNP05981 417 aa16.73■□□□□ 0.27
CIRBP-238ENST00000592412 SOX18P35713 384 aa16.73■□□□□ 0.27
CIRBP-238ENST00000592412 CDK9P50750 372 aaKnown RBP16.73■□□□□ 0.27
CIRBP-238ENST00000592412 PCDH1Q08174 1060 aa16.73■□□□□ 0.27
CIRBP-238ENST00000592412 KEAP1Q14145 624 aa16.73■□□□□ 0.27
CIRBP-238ENST00000592412 ZNF267Q14586 743 aaPredicted RBP16.73■□□□□ 0.27
CIRBP-238ENST00000592412 ZKSCAN8Q15776 578 aaPredicted RBP16.73■□□□□ 0.27
CIRBP-238ENST00000592412 VASNQ6EMK4 673 aa16.73■□□□□ 0.27
CIRBP-238ENST00000592412 MED27Q6P2C8 311 aa16.73■□□□□ 0.27
CIRBP-238ENST00000592412 RNF111Q6ZNA4 994 aa16.73■□□□□ 0.27
CIRBP-238ENST00000592412 CHSY3Q70JA7 882 aa16.73■□□□□ 0.27
CIRBP-238ENST00000592412 SLC29A4Q7RTT9 530 aa16.73■□□□□ 0.27
CIRBP-238ENST00000592412 LRRC70Q7Z2Q7 622 aa16.73■□□□□ 0.27
CIRBP-238ENST00000592412 GPR180Q86V85 440 aa16.73■□□□□ 0.27
CIRBP-238ENST00000592412 DIO2Q92813 273 aa16.73■□□□□ 0.27
CIRBP-238ENST00000592412 UCN3Q969E3 161 aa16.73■□□□□ 0.27
CIRBP-238ENST00000592412 CMTM7Q96FZ5 175 aa16.73■□□□□ 0.27
CIRBP-238ENST00000592412 C18orf12Q96KH6 178 aa16.73■□□□□ 0.27
CIRBP-238ENST00000592412 KRT12Q99456 494 aa16.73■□□□□ 0.27
CIRBP-238ENST00000592412 NSMCE4AQ9NXX6 385 aa16.73■□□□□ 0.27
CIRBP-238ENST00000592412 TLN2Q9Y4G6 2542 aa16.73■□□□□ 0.27
CIRBP-238ENST00000592412 DOCK7Q96N67 2140 aa16.72■□□□□ 0.27
CIRBP-238ENST00000592412 IQANK1A0A1B0GTG1 560 aa16.72■□□□□ 0.27
CIRBP-238ENST00000592412 MBD3L4A6NDZ8 208 aaPredicted RBP16.72■□□□□ 0.27
CIRBP-238ENST00000592412 MBD3L3A6NE82 208 aaPredicted RBP16.72■□□□□ 0.27
CIRBP-238ENST00000592412 MBD3L5A6NJ08 208 aaPredicted RBP16.72■□□□□ 0.27
CIRBP-238ENST00000592412 ACSL3O95573 720 aa16.72■□□□□ 0.27
CIRBP-238ENST00000592412 IL2RAP01589 272 aa16.72■□□□□ 0.27
CIRBP-238ENST00000592412 CD53P19397 219 aa16.72■□□□□ 0.27
CIRBP-238ENST00000592412 FBXW4P57775 412 aa16.72■□□□□ 0.27
CIRBP-238ENST00000592412 ATP6V0D1P61421 351 aa16.72■□□□□ 0.27
CIRBP-238ENST00000592412 SORDQ00796 357 aa16.72■□□□□ 0.27
CIRBP-238ENST00000592412 CBLBQ13191 982 aa16.72■□□□□ 0.27
CIRBP-238ENST00000592412 BIKQ13323 160 aa16.72■□□□□ 0.27
CIRBP-238ENST00000592412 RPS6KA2Q15349 733 aa16.72■□□□□ 0.27
CIRBP-238ENST00000592412 NHSL2Q5HYW2 709 aa16.72■□□□□ 0.27
CIRBP-238ENST00000592412 MRM1Q6IN84 353 aaKnown RBP16.72■□□□□ 0.27
CIRBP-238ENST00000592412 CAPN12Q6ZSI9 719 aa16.72■□□□□ 0.27
CIRBP-238ENST00000592412 ZCCHC7Q8N3Z6 543 aaKnown RBP16.72■□□□□ 0.27
CIRBP-238ENST00000592412 C7orf57Q8NEG2 295 aa16.72■□□□□ 0.27
CIRBP-238ENST00000592412 MBD3L2Q8NHZ7 208 aaPredicted RBP16.72■□□□□ 0.27
CIRBP-238ENST00000592412 EXT2Q93063 718 aa16.72■□□□□ 0.27
CIRBP-238ENST00000592412 LRRC46Q96FV0 321 aa16.72■□□□□ 0.27
CIRBP-238ENST00000592412 WDYHV1Q96HA8 205 aa16.72■□□□□ 0.27
CIRBP-238ENST00000592412 RILPQ96NA2 401 aa16.72■□□□□ 0.27
CIRBP-238ENST00000592412 GNRHR2Q96P88 292 aa16.72■□□□□ 0.27
CIRBP-238ENST00000592412 GPR22Q99680 433 aa16.72■□□□□ 0.27
CIRBP-238ENST00000592412 UGT2B28Q9BY64 529 aa16.72■□□□□ 0.27
CIRBP-238ENST00000592412 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.72■□□□□ 0.27
CIRBP-238ENST00000592412 MS4A12Q9NXJ0 267 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms