RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 TIMM22Q9Y584 194 aa25.24■■□□□ 1.63
SMAD4-213ENST00000591914 PCDHA9Q9Y5H5 950 aa25.24■■□□□ 1.63
SMAD4-213ENST00000591914 SPTBN1Q01082 2364 aaKnown RBP25.24■■□□□ 1.63
SMAD4-213ENST00000591914 C1orf226A1L170 272 aa25.23■■□□□ 1.63
SMAD4-213ENST00000591914 SERTM1A2A2V5 107 aa25.23■■□□□ 1.63
SMAD4-213ENST00000591914 ERVK-8P63133 956 aa25.23■■□□□ 1.63
SMAD4-213ENST00000591914 ZNF267Q14586 743 aaPredicted RBP25.23■■□□□ 1.63
SMAD4-213ENST00000591914 SLC48A1Q6P1K1 146 aa25.23■■□□□ 1.63
SMAD4-213ENST00000591914 TRABD2AQ86V40 505 aa25.23■■□□□ 1.63
SMAD4-213ENST00000591914 SULF2Q8IWU5 870 aa25.23■■□□□ 1.63
SMAD4-213ENST00000591914 CCDC63Q8NA47 563 aa25.23■■□□□ 1.63
SMAD4-213ENST00000591914 DOK4Q8TEW6 326 aa25.23■■□□□ 1.63
SMAD4-213ENST00000591914 TM4SF18Q96CE8 201 aa25.23■■□□□ 1.63
SMAD4-213ENST00000591914 GPR137Q96N19 417 aa25.23■■□□□ 1.63
SMAD4-213ENST00000591914 CXorf21Q9HAI6 301 aa25.23■■□□□ 1.63
SMAD4-213ENST00000591914 TIMMDC1Q9NPL8 285 aa25.23■■□□□ 1.63
SMAD4-213ENST00000591914 CES1P1Q9UKY3 287 aa25.23■■□□□ 1.63
SMAD4-213ENST00000591914 ERVK-19Q9WJR5 959 aa25.23■■□□□ 1.63
SMAD4-213ENST00000591914 H3BQF6 201 aa25.22■■□□□ 1.63
SMAD4-213ENST00000591914 KLRC4-KLRK1H3BQV0 150 aa25.22■■□□□ 1.63
SMAD4-213ENST00000591914 LRRTM2O43300 516 aa25.22■■□□□ 1.63
SMAD4-213ENST00000591914 ZNF354AO60765 605 aaPredicted RBP25.22■■□□□ 1.63
SMAD4-213ENST00000591914 FOXA1P55317 472 aa25.22■■□□□ 1.63
SMAD4-213ENST00000591914 SLC37A1P57057 533 aa25.22■■□□□ 1.63
SMAD4-213ENST00000591914 TRA2BP62995 288 aaKnown RBP25.22■■□□□ 1.63
SMAD4-213ENST00000591914 IFFO1Q0D2I5 559 aa25.22■■□□□ 1.63
SMAD4-213ENST00000591914 KRTCAP3Q53RY4 240 aa25.22■■□□□ 1.63
SMAD4-213ENST00000591914 RNFT1Q5M7Z0 435 aa25.22■■□□□ 1.63
SMAD4-213ENST00000591914 IL20RBQ6UXL0 311 aa25.22■■□□□ 1.63
SMAD4-213ENST00000591914 POGLUT1Q8NBL1 392 aa25.22■■□□□ 1.63
SMAD4-213ENST00000591914 PSD4Q8NDX1 1056 aa25.22■■□□□ 1.63
SMAD4-213ENST00000591914 ROPN1BQ9BZX4 212 aaPredicted RBP25.22■■□□□ 1.63
SMAD4-213ENST00000591914 ROPN1Q9HAT0 212 aaPredicted RBP25.22■■□□□ 1.63
SMAD4-213ENST00000591914 MCM8Q9UJA3 840 aa25.22■■□□□ 1.63
SMAD4-213ENST00000591914 PEX1O43933 1283 aa25.21■■□□□ 1.63
SMAD4-213ENST00000591914 CLPSP04118 112 aa25.21■■□□□ 1.63
SMAD4-213ENST00000591914 GP1BBP13224 206 aa25.21■■□□□ 1.63
SMAD4-213ENST00000591914 CPMP14384 443 aa25.21■■□□□ 1.63
SMAD4-213ENST00000591914 ZNF24P17028 368 aa25.21■■□□□ 1.63
SMAD4-213ENST00000591914 MEOX1P50221 254 aa25.21■■□□□ 1.63
SMAD4-213ENST00000591914 XKP51811 444 aa25.21■■□□□ 1.63
SMAD4-213ENST00000591914 ERCC6LQ2NKX8 1250 aa25.21■■□□□ 1.63
SMAD4-213ENST00000591914 SPIN4Q56A73 249 aa25.21■■□□□ 1.63
SMAD4-213ENST00000591914 PIGGQ5H8A4 983 aa25.21■■□□□ 1.63
SMAD4-213ENST00000591914 CFAP157Q5JU67 520 aa25.21■■□□□ 1.63
SMAD4-213ENST00000591914 LIPMQ5VYY2 423 aa25.21■■□□□ 1.63
SMAD4-213ENST00000591914 OPN5Q6U736 354 aa25.21■■□□□ 1.63
SMAD4-213ENST00000591914 RNF111Q6ZNA4 994 aa25.21■■□□□ 1.63
SMAD4-213ENST00000591914 MMP21Q8N119 569 aa25.21■■□□□ 1.63
SMAD4-213ENST00000591914 BANPQ8N9N5 519 aa25.21■■□□□ 1.63
SMAD4-213ENST00000591914 APOPT1Q96IL0 206 aa25.21■■□□□ 1.63
SMAD4-213ENST00000591914 TSPAN10Q9H1Z9 355 aaPredicted RBP25.21■■□□□ 1.63
SMAD4-213ENST00000591914 MID2Q9UJV3 735 aa25.21■■□□□ 1.63
SMAD4-213ENST00000591914 PLLPQ9Y342 182 aa25.21■■□□□ 1.63
SMAD4-213ENST00000591914 ICE1Q9Y2F5 2266 aa25.21■■□□□ 1.63
SMAD4-213ENST00000591914 OR6C76A6NM76 312 aa25.2■■□□□ 1.62
SMAD4-213ENST00000591914 NPIPA5E9PKD4 350 aa25.2■■□□□ 1.62
SMAD4-213ENST00000591914 RAE1P78406 368 aaKnown RBP25.2■■□□□ 1.62
SMAD4-213ENST00000591914 HMGCS1Q01581 520 aa25.2■■□□□ 1.62
SMAD4-213ENST00000591914 ASPHQ12797 758 aa25.2■■□□□ 1.62
SMAD4-213ENST00000591914 PCLAFQ15004 111 aa25.2■■□□□ 1.62
SMAD4-213ENST00000591914 ZNF800Q2TB10 664 aaPredicted RBP eCLIP25.2■■□□□ 1.62
SMAD4-213ENST00000591914 GALNT12Q8IXK2 581 aa25.2■■□□□ 1.62
SMAD4-213ENST00000591914 MREGQ8N565 214 aa25.2■■□□□ 1.62
SMAD4-213ENST00000591914 ZFP62Q8NB50 900 aaPredicted RBP25.2■■□□□ 1.62
SMAD4-213ENST00000591914 RELTQ969Z4 430 aa25.2■■□□□ 1.62
SMAD4-213ENST00000591914 C11orf24Q96F05 449 aaPredicted RBP25.2■■□□□ 1.62
SMAD4-213ENST00000591914 PARD6BQ9BYG5 372 aa25.2■■□□□ 1.62
SMAD4-213ENST00000591914 NPIPA1Q9UND3 350 aa25.2■■□□□ 1.62
SMAD4-213ENST00000591914 A0A1B0GUH1 482 aa25.19■■□□□ 1.62
SMAD4-213ENST00000591914 PORP16435 677 aaPredicted RBP25.19■■□□□ 1.62
SMAD4-213ENST00000591914 RBPJQ06330 500 aa25.19■■□□□ 1.62
SMAD4-213ENST00000591914 ACSM2AQ08AH3 577 aa25.19■■□□□ 1.62
SMAD4-213ENST00000591914 EBPQ15125 230 aaKnown RBP25.19■■□□□ 1.62
SMAD4-213ENST00000591914 ZNF750Q32MQ0 723 aa25.19■■□□□ 1.62
SMAD4-213ENST00000591914 C1QL3Q5VWW1 255 aa25.19■■□□□ 1.62
SMAD4-213ENST00000591914 ACSM2BQ68CK6 577 aa25.19■■□□□ 1.62
SMAD4-213ENST00000591914 GALNT18Q6P9A2 607 aa25.19■■□□□ 1.62
SMAD4-213ENST00000591914 RTL4Q6ZR62 310 aa25.19■■□□□ 1.62
SMAD4-213ENST00000591914 SLC29A4Q7RTT9 530 aa25.19■■□□□ 1.62
SMAD4-213ENST00000591914 C10orf107Q8IVU9 208 aa25.19■■□□□ 1.62
SMAD4-213ENST00000591914 GOLM1Q8NBJ4 401 aa25.19■■□□□ 1.62
SMAD4-213ENST00000591914 C16orf52Q8NHV5 167 aa25.19■■□□□ 1.62
SMAD4-213ENST00000591914 APIPQ96GX9 242 aa25.19■■□□□ 1.62
SMAD4-213ENST00000591914 SGCZQ96LD1 299 aa25.19■■□□□ 1.62
SMAD4-213ENST00000591914 FAIM2Q9BWQ8 316 aa25.19■■□□□ 1.62
SMAD4-213ENST00000591914 WWTR1Q9GZV5 400 aa25.19■■□□□ 1.62
SMAD4-213ENST00000591914 TNFRSF12AQ9NP84 129 aa25.19■■□□□ 1.62
SMAD4-213ENST00000591914 DEPPQ9NTK1 212 aa25.19■■□□□ 1.62
SMAD4-213ENST00000591914 GOLGA6L10A6NI86 522 aa25.18■■□□□ 1.62
SMAD4-213ENST00000591914 ASNA1O43681 348 aa25.18■■□□□ 1.62
SMAD4-213ENST00000591914 PCDH7O60245 1069 aa25.18■■□□□ 1.62
SMAD4-213ENST00000591914 NADKO95544 446 aaPredicted RBP25.18■■□□□ 1.62
SMAD4-213ENST00000591914 CT62P0C5K7 136 aa25.18■■□□□ 1.62
SMAD4-213ENST00000591914 SSTR4P31391 388 aa25.18■■□□□ 1.62
SMAD4-213ENST00000591914 GPR85P60893 370 aa25.18■■□□□ 1.62
SMAD4-213ENST00000591914 FUT7Q11130 342 aa25.18■■□□□ 1.62
SMAD4-213ENST00000591914 SCIMPQ6UWF3 145 aa25.18■■□□□ 1.62
SMAD4-213ENST00000591914 SRRM1Q8IYB3 904 aaKnown RBP25.18■■□□□ 1.62
SMAD4-213ENST00000591914 SLC15A4Q8N697 577 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms