RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 UCN3Q969E3 161 aa9.37□□□□□ -0.91
BRCA1-227ENST00000591849 KLHL29Q96CT2 875 aa9.37□□□□□ -0.91
BRCA1-227ENST00000591849 SIGLEC12Q96PQ1 595 aa9.37□□□□□ -0.91
BRCA1-227ENST00000591849 GAL3ST4Q96RP7 486 aa9.37□□□□□ -0.91
BRCA1-227ENST00000591849 NPAS2Q99743 824 aa9.37□□□□□ -0.91
BRCA1-227ENST00000591849 PAIP2Q9BPZ3 127 aaKnown RBP9.37□□□□□ -0.91
BRCA1-227ENST00000591849 EBPLQ9BY08 206 aa9.37□□□□□ -0.91
BRCA1-227ENST00000591849 TIMMDC1Q9NPL8 285 aa9.37□□□□□ -0.91
BRCA1-227ENST00000591849 HPF1Q9NWY4 346 aa9.37□□□□□ -0.91
BRCA1-227ENST00000591849 PPIEQ9UNP9 301 aaKnown RBP9.37□□□□□ -0.91
BRCA1-227ENST00000591849 ERVK-19Q9WJR5 959 aa9.37□□□□□ -0.91
BRCA1-227ENST00000591849 DLGAP4Q9Y2H0 992 aa9.37□□□□□ -0.91
BRCA1-227ENST00000591849 USP9YO00507 2555 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-227ENST00000591849 SERTM1A2A2V5 107 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 ANKUB1A6NFN9 424 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 TCP11X1B4DZS4 312 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 SLC25A12O75746 678 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 OR2J2O76002 312 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 RSL1D1O76021 490 aaKnown RBP9.36□□□□□ -0.91
BRCA1-227ENST00000591849 BPGMP07738 259 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 SP1P08047 785 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 IL3P08700 152 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 LINC00032P0C843 101 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 CPMP14384 443 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 DRD2P14416 443 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 CREB1P16220 341 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 TIA1P31483 386 aaKnown RBP eCLIP9.36□□□□□ -0.91
BRCA1-227ENST00000591849 GALNSP34059 522 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 TRHRP34981 398 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-227ENST00000591849 SERPINB5P36952 375 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 GPR143P51810 404 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 C2orf80Q0P641 193 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 MRPL49Q13405 166 aaKnown RBP9.36□□□□□ -0.91
BRCA1-227ENST00000591849 ARL13AQ5H913 290 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-227ENST00000591849 FHL5Q5TD97 284 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 HHATQ5VTY9 493 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 SLC48A1Q6P1K1 146 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 OPN5Q6U736 354 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 IL20RBQ6UXL0 311 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 C16orf47Q6ZP98 133 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-227ENST00000591849 ZCCHC23Q6ZST2 131 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 GALNTL5Q7Z4T8 443 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 EXOC3L1Q86VI1 746 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 GPALPP1Q8IXQ4 340 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 SAMD14Q8IZD0 417 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-227ENST00000591849 CLYBLQ8N0X4 340 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 CYP4Z2PQ8N1L4 340 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 ZNF321PQ8N8H1 164 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 ANKRD42Q8N9B4 389 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 OR8K3Q8NH51 312 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 SLC22A8Q8TCC7 542 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 AGR3Q8TD06 166 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 ZNF721Q8TF20 911 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 C16orf78Q8WTQ4 265 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 FBXL20Q96IG2 436 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 BBS4Q96RK4 519 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 BRINP2Q9C0B6 783 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 LRTM1Q9HBL6 345 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 MIEF1Q9NQG6 463 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 MYOTQ9UBF9 498 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 BCAP29Q9UHQ4 241 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 UTS2RQ9UKP6 389 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 ENTPD4Q9Y227 616 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 NTNG1Q9Y2I2 539 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 KLF13Q9Y2Y9 288 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-227ENST00000591849 TRAF6Q9Y4K3 522 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 SCN2AQ99250 2005 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 RELNP78509 3460 aa9.36□□□□□ -0.91
BRCA1-227ENST00000591849 OR6C76A6NM76 312 aa9.35□□□□□ -0.91
BRCA1-227ENST00000591849 KLRC4-KLRK1H3BQV0 150 aa9.35□□□□□ -0.91
BRCA1-227ENST00000591849 TM9SF1O15321 606 aa9.35□□□□□ -0.91
BRCA1-227ENST00000591849 TYROBPO43914 113 aa9.35□□□□□ -0.91
BRCA1-227ENST00000591849 PRKNO60260 465 aaPredicted RBP9.35□□□□□ -0.91
BRCA1-227ENST00000591849 ZWINTO95229 277 aa9.35□□□□□ -0.91
BRCA1-227ENST00000591849 HSPA4LO95757 839 aa9.35□□□□□ -0.91
BRCA1-227ENST00000591849 CHRNGP07510 517 aa9.35□□□□□ -0.91
BRCA1-227ENST00000591849 GSTM5P46439 218 aa9.35□□□□□ -0.91
BRCA1-227ENST00000591849 UQCRFS1P47985 274 aa9.35□□□□□ -0.91
BRCA1-227ENST00000591849 SERPINB4P48594 390 aa9.35□□□□□ -0.91
BRCA1-227ENST00000591849 HK2P52789 917 aa9.35□□□□□ -0.91
BRCA1-227ENST00000591849 ALDH6A1Q02252 535 aaKnown RBP9.35□□□□□ -0.91
BRCA1-227ENST00000591849 EIF2S3LQ2VIR3 472 aaKnown RBP9.35□□□□□ -0.91
BRCA1-227ENST00000591849 ZNF750Q32MQ0 723 aa9.35□□□□□ -0.91
BRCA1-227ENST00000591849 SH2D4BQ5SQS7 431 aa9.35□□□□□ -0.91
BRCA1-227ENST00000591849 ZNF468Q5VIY5 522 aaPredicted RBP9.35□□□□□ -0.91
BRCA1-227ENST00000591849 DGAT2L6Q6ZPD8 337 aa9.35□□□□□ -0.91
BRCA1-227ENST00000591849 TRIM46Q7Z4K8 759 aa9.35□□□□□ -0.91
BRCA1-227ENST00000591849 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.35□□□□□ -0.91
BRCA1-227ENST00000591849 TAGAPQ8N103 731 aa9.35□□□□□ -0.91
BRCA1-227ENST00000591849 MMP21Q8N119 569 aa9.35□□□□□ -0.91
BRCA1-227ENST00000591849 LRRC25Q8N386 305 aaPredicted RBP9.35□□□□□ -0.91
BRCA1-227ENST00000591849 MDS2Q8NDY4 140 aa9.35□□□□□ -0.91
BRCA1-227ENST00000591849 FAM76AQ8TAV0 307 aa9.35□□□□□ -0.91
BRCA1-227ENST00000591849 EXOSC8Q96B26 276 aaKnown RBP9.35□□□□□ -0.91
BRCA1-227ENST00000591849 PGM2Q96G03 612 aa9.35□□□□□ -0.91
BRCA1-227ENST00000591849 PKNOX2Q96KN3 472 aa9.35□□□□□ -0.91
BRCA1-227ENST00000591849 HES7Q9BYE0 225 aa9.35□□□□□ -0.91
BRCA1-227ENST00000591849 CXorf21Q9HAI6 301 aa9.35□□□□□ -0.91
BRCA1-227ENST00000591849 SSU72Q9NP77 194 aaKnown RBP9.35□□□□□ -0.91
BRCA1-227ENST00000591849 ARGLU1Q9NWB6 273 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms