RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 ALDH9A1P49189 494 aa16.69■□□□□ 0.26
CIRBP-227ENST00000590188 NAGLUP54802 743 aa16.69■□□□□ 0.26
CIRBP-227ENST00000590188 FOXA1P55317 472 aa16.69■□□□□ 0.26
CIRBP-227ENST00000590188 RBPJQ06330 500 aa16.69■□□□□ 0.26
CIRBP-227ENST00000590188 BIKQ13323 160 aa16.69■□□□□ 0.26
CIRBP-227ENST00000590188 CCDC153Q494R4 210 aa16.69■□□□□ 0.26
CIRBP-227ENST00000590188 FAM180BQ6P0A1 224 aa16.69■□□□□ 0.26
CIRBP-227ENST00000590188 RNF111Q6ZNA4 994 aa16.69■□□□□ 0.26
CIRBP-227ENST00000590188 SIAH3Q8IW03 269 aa16.69■□□□□ 0.26
CIRBP-227ENST00000590188 C7orf57Q8NEG2 295 aa16.69■□□□□ 0.26
CIRBP-227ENST00000590188 OR4K14Q8NGD5 310 aa16.69■□□□□ 0.26
CIRBP-227ENST00000590188 OR8K3Q8NH51 312 aa16.69■□□□□ 0.26
CIRBP-227ENST00000590188 AGAP11Q8TF27 550 aa16.69■□□□□ 0.26
CIRBP-227ENST00000590188 FBXL20Q96IG2 436 aa16.69■□□□□ 0.26
CIRBP-227ENST00000590188 MAGED4Q96JG8 741 aa16.69■□□□□ 0.26
CIRBP-227ENST00000590188 ACPTQ9BZG2 426 aa16.69■□□□□ 0.26
CIRBP-227ENST00000590188 DEPPQ9NTK1 212 aa16.69■□□□□ 0.26
CIRBP-227ENST00000590188 NMRK1Q9NWW6 199 aa16.69■□□□□ 0.26
CIRBP-227ENST00000590188 GRID1Q9ULK0 1009 aa16.69■□□□□ 0.26
CIRBP-227ENST00000590188 LRRK2Q5S007 2527 aa16.68■□□□□ 0.26
CIRBP-227ENST00000590188 PINLYPA6NC86 204 aa16.68■□□□□ 0.26
CIRBP-227ENST00000590188 WIPF3A6NGB9 483 aa16.68■□□□□ 0.26
CIRBP-227ENST00000590188 TFECO14948 347 aaPredicted RBP16.68■□□□□ 0.26
CIRBP-227ENST00000590188 ASNA1O43681 348 aa16.68■□□□□ 0.26
CIRBP-227ENST00000590188 HS6ST1O60243 411 aa16.68■□□□□ 0.26
CIRBP-227ENST00000590188 CDC40O60508 579 aaKnown RBP eCLIP16.68■□□□□ 0.26
CIRBP-227ENST00000590188 CLPSP04118 112 aa16.68■□□□□ 0.26
CIRBP-227ENST00000590188 SLC35E2P0CK97 266 aa16.68■□□□□ 0.26
CIRBP-227ENST00000590188 DEKP35659 375 aaKnown RBP16.68■□□□□ 0.26
CIRBP-227ENST00000590188 FEN1P39748 380 aaKnown RBP16.68■□□□□ 0.26
CIRBP-227ENST00000590188 XKP51811 444 aa16.68■□□□□ 0.26
CIRBP-227ENST00000590188 PKNOX1P55347 436 aa16.68■□□□□ 0.26
CIRBP-227ENST00000590188 IFFO1Q0D2I5 559 aa16.68■□□□□ 0.26
CIRBP-227ENST00000590188 CSTF3Q12996 717 aaKnown RBP16.68■□□□□ 0.26
CIRBP-227ENST00000590188 C3AR1Q16581 482 aa16.68■□□□□ 0.26
CIRBP-227ENST00000590188 SPRED3Q2MJR0 410 aa16.68■□□□□ 0.26
CIRBP-227ENST00000590188 CFAP157Q5JU67 520 aa16.68■□□□□ 0.26
CIRBP-227ENST00000590188 SLC29A4Q7RTT9 530 aa16.68■□□□□ 0.26
CIRBP-227ENST00000590188 TM4SF18Q96CE8 201 aa16.68■□□□□ 0.26
CIRBP-227ENST00000590188 CCDC126Q96EE4 140 aa16.68■□□□□ 0.26
CIRBP-227ENST00000590188 APIPQ96GX9 242 aa16.68■□□□□ 0.26
CIRBP-227ENST00000590188 EBPLQ9BY08 206 aa16.68■□□□□ 0.26
CIRBP-227ENST00000590188 TINAGQ9UJW2 476 aa16.68■□□□□ 0.26
CIRBP-227ENST00000590188 STK38LQ9Y2H1 464 aa16.68■□□□□ 0.26
CIRBP-227ENST00000590188 PCDHA9Q9Y5H5 950 aa16.68■□□□□ 0.26
CIRBP-227ENST00000590188 CROCCQ5TZA2 2017 aa16.68■□□□□ 0.26
CIRBP-227ENST00000590188 NBPF19A0A087WUL8 3843 aa16.67■□□□□ 0.26
CIRBP-227ENST00000590188 A0A1B0GUH1 482 aa16.67■□□□□ 0.26
CIRBP-227ENST00000590188 C1orf226A1L170 272 aa16.67■□□□□ 0.26
CIRBP-227ENST00000590188 FAM166BA8MTA8 275 aa16.67■□□□□ 0.26
CIRBP-227ENST00000590188 CCL21O00585 134 aa16.67■□□□□ 0.26
CIRBP-227ENST00000590188 ZNF500O60304 480 aaPredicted RBP16.67■□□□□ 0.26
CIRBP-227ENST00000590188 SLC19A2O60779 497 aa16.67■□□□□ 0.26
CIRBP-227ENST00000590188 GUCY1B2O75343 617 aa16.67■□□□□ 0.26
CIRBP-227ENST00000590188 CRCPO75575 148 aa16.67■□□□□ 0.26
CIRBP-227ENST00000590188 ENO1P06733 434 aaKnown RBP16.67■□□□□ 0.26
CIRBP-227ENST00000590188 CPMP14384 443 aa16.67■□□□□ 0.26
CIRBP-227ENST00000590188 CPA3P15088 417 aa16.67■□□□□ 0.26
CIRBP-227ENST00000590188 SERPINB3P29508 390 aa16.67■□□□□ 0.26
CIRBP-227ENST00000590188 PER3P56645 1201 aa16.67■□□□□ 0.26
CIRBP-227ENST00000590188 SLC37A1P57057 533 aa16.67■□□□□ 0.26
CIRBP-227ENST00000590188 PLGLB1Q02325 96 aa16.67■□□□□ 0.26
CIRBP-227ENST00000590188 PIGGQ5H8A4 983 aa16.67■□□□□ 0.26
CIRBP-227ENST00000590188 GALNT12Q8IXK2 581 aa16.67■□□□□ 0.26
CIRBP-227ENST00000590188 GPALPP1Q8IXQ4 340 aa16.67■□□□□ 0.26
CIRBP-227ENST00000590188 CNPY4Q8N129 248 aa16.67■□□□□ 0.26
CIRBP-227ENST00000590188 NUBPLQ8TB37 319 aa16.67■□□□□ 0.26
CIRBP-227ENST00000590188 AENQ8WTP8 325 aaKnown RBP16.67■□□□□ 0.26
CIRBP-227ENST00000590188 CHTF18Q8WVB6 975 aa16.67■□□□□ 0.26
CIRBP-227ENST00000590188 KLHL29Q96CT2 875 aa16.67■□□□□ 0.26
CIRBP-227ENST00000590188 WWTR1Q9GZV5 400 aa16.67■□□□□ 0.26
CIRBP-227ENST00000590188 CXorf21Q9HAI6 301 aa16.67■□□□□ 0.26
CIRBP-227ENST00000590188 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.67■□□□□ 0.26
CIRBP-227ENST00000590188 POLEQ07864 2286 aa16.66■□□□□ 0.26
CIRBP-227ENST00000590188 ICE1Q9Y2F5 2266 aa16.66■□□□□ 0.26
CIRBP-227ENST00000590188 PCDH7O60245 1069 aa16.66■□□□□ 0.26
CIRBP-227ENST00000590188 SPAG7O75391 227 aa16.66■□□□□ 0.26
CIRBP-227ENST00000590188 PDE9AO76083 593 aa16.66■□□□□ 0.26
CIRBP-227ENST00000590188 LRATO95237 230 aa16.66■□□□□ 0.26
CIRBP-227ENST00000590188 NADKO95544 446 aaPredicted RBP16.66■□□□□ 0.26
CIRBP-227ENST00000590188 IL3P08700 152 aa16.66■□□□□ 0.26
CIRBP-227ENST00000590188 CCL3P10147 92 aa16.66■□□□□ 0.26
CIRBP-227ENST00000590188 HSD3B1P14060 373 aa16.66■□□□□ 0.26
CIRBP-227ENST00000590188 PORP16435 677 aaPredicted RBP16.66■□□□□ 0.26
CIRBP-227ENST00000590188 HSD3B2P26439 372 aa16.66■□□□□ 0.26
CIRBP-227ENST00000590188 CA7P43166 264 aa16.66■□□□□ 0.26
CIRBP-227ENST00000590188 NR0B1P51843 470 aaKnown RBP16.66■□□□□ 0.26
CIRBP-227ENST00000590188 RAE1P78406 368 aaKnown RBP16.66■□□□□ 0.26
CIRBP-227ENST00000590188 DUSP2Q05923 314 aa16.66■□□□□ 0.26
CIRBP-227ENST00000590188 SLC18A2Q05940 514 aa16.66■□□□□ 0.26
CIRBP-227ENST00000590188 ACSM2AQ08AH3 577 aa16.66■□□□□ 0.26
CIRBP-227ENST00000590188 EBPQ15125 230 aaKnown RBP16.66■□□□□ 0.26
CIRBP-227ENST00000590188 KRTCAP3Q53RY4 240 aa16.66■□□□□ 0.26
CIRBP-227ENST00000590188 SPDYAQ5MJ70 313 aa16.66■□□□□ 0.26
CIRBP-227ENST00000590188 C6orf163Q5TEZ5 329 aa16.66■□□□□ 0.26
CIRBP-227ENST00000590188 ACSM2BQ68CK6 577 aa16.66■□□□□ 0.26
CIRBP-227ENST00000590188 SLC48A1Q6P1K1 146 aa16.66■□□□□ 0.26
CIRBP-227ENST00000590188 OPN5Q6U736 354 aa16.66■□□□□ 0.26
CIRBP-227ENST00000590188 TMEM64Q6YI46 380 aa16.66■□□□□ 0.26
CIRBP-227ENST00000590188 RTL4Q6ZR62 310 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms