RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 CDHR1Q96JP9 859 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 NSMCE2Q96MF7 247 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 TNFRSF13CQ96RJ3 184 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 IWS1Q96ST2 819 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 ZNF577Q9BSK1 485 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 LRRC61Q9BV99 259 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 FTHL17Q9BXU8 183 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 XPO4Q9C0E2 1151 aaKnown RBP2.84□□□□□ -1.95
SMAD4-207ENST00000589076 STRADBQ9C0K7 418 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 ATG10Q9H0Y0 220 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 RPS10P5Q9NQ39 176 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.84□□□□□ -1.95
SMAD4-207ENST00000589076 NDUFA13Q9P0J0 144 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 COPS7AQ9UBW8 275 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 MUTYHQ9UIF7 546 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 ODF2LQ9ULJ1 636 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 DIMT1Q9UNQ2 313 aaKnown RBP2.84□□□□□ -1.95
SMAD4-207ENST00000589076 NIP7Q9Y221 180 aaKnown RBP eCLIP2.84□□□□□ -1.95
SMAD4-207ENST00000589076 FER1L5A0AVI2 2057 aa2.84□□□□□ -1.95
SMAD4-207ENST00000589076 KIF7Q2M1P5 1343 aa2.84□□□□□ -1.96
SMAD4-207ENST00000589076 IGLV4-3A0A075B6K6 122 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 TRBV5-4A0A0C4DH59 114 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 SH3PXD2BA1X283 911 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 CFAP73A6NFT4 308 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 IGLON5A6NGN9 336 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 KRTAP16-1A8MUX0 517 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 PDHXO00330 501 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 SSX5O60225 188 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 ANXA9O76027 345 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 SORBS2O94875 1100 aaKnown RBP2.83□□□□□ -1.96
SMAD4-207ENST00000589076 REC8O95072 547 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 POP4O95707 220 aaKnown RBP2.83□□□□□ -1.96
SMAD4-207ENST00000589076 PDGFBP01127 241 aaPredicted RBP2.83□□□□□ -1.96
SMAD4-207ENST00000589076 CXCL10P02778 98 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 FCER2P06734 321 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 MAPK3P27361 379 aaPredicted RBP2.83□□□□□ -1.96
SMAD4-207ENST00000589076 SFNP31947 248 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 SLC1A6P48664 564 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 KRTAP12-2P59991 146 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 EXOSC7Q15024 291 aaKnown RBP2.83□□□□□ -1.96
SMAD4-207ENST00000589076 SHROOM1Q2M3G4 852 aaPredicted RBP2.83□□□□□ -1.96
SMAD4-207ENST00000589076 GPAT3Q53EU6 434 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 CCDC92Q53HC0 331 aaPredicted RBP2.83□□□□□ -1.96
SMAD4-207ENST00000589076 CDC42EP5Q6NZY7 148 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 OLFM4Q6UX06 510 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 Q6ZRG5 221 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 MCM10Q7L590 875 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 ITIH5Q86UX2 942 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 KCNMB4Q86W47 210 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 RNF130Q86XS8 419 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 WDR49Q8IV35 697 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 PHC2Q8IXK0 858 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 PARP8Q8N3A8 854 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 BANPQ8N9N5 519 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 COLGALT1Q8NBJ5 622 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 ICA1LQ8NDH6 482 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 OR1B1Q8NGR6 318 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 C16orf58Q96GQ5 468 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 CAPNS2Q96L46 248 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 COQ7Q99807 217 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 RBM4BQ9BQ04 359 aaKnown RBP2.83□□□□□ -1.96
SMAD4-207ENST00000589076 C1orf21Q9H246 121 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 CXXC4Q9H2H0 198 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 TUBB1Q9H4B7 451 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 MOB1AQ9H8S9 216 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 SP140LQ9H930 580 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 PANK3Q9H999 370 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 HPS4Q9NQG7 708 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 DEPPQ9NTK1 212 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 HOOK1Q9UJC3 728 aaKnown RBP2.83□□□□□ -1.96
SMAD4-207ENST00000589076 RARRES3Q9UL19 164 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 ENTPD4Q9Y227 616 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 AUP1Q9Y679 476 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 NOTCH2Q04721 2471 aa2.83□□□□□ -1.96
SMAD4-207ENST00000589076 IGHV3OR16-10A0A075B7F0 116 aa2.82□□□□□ -1.96
SMAD4-207ENST00000589076 LOC390937A0A1W2PQ73 354 aa2.82□□□□□ -1.96
SMAD4-207ENST00000589076 KRT87PA6NCN2 255 aa2.82□□□□□ -1.96
SMAD4-207ENST00000589076 MEI4A8MW99 385 aa2.82□□□□□ -1.96
SMAD4-207ENST00000589076 A8MXK9 166 aa2.82□□□□□ -1.96
SMAD4-207ENST00000589076 EPM2AB3EWF7 344 aa2.82□□□□□ -1.96
SMAD4-207ENST00000589076 ZNF749O43361 778 aa2.82□□□□□ -1.96
SMAD4-207ENST00000589076 SYNGR4O95473 234 aa2.82□□□□□ -1.96
SMAD4-207ENST00000589076 IGHG1P01857 330 aa2.82□□□□□ -1.96
SMAD4-207ENST00000589076 ETS1P14921 441 aa2.82□□□□□ -1.96
SMAD4-207ENST00000589076 ID1P41134 155 aa2.82□□□□□ -1.96
SMAD4-207ENST00000589076 MTIF2P46199 727 aaKnown RBP2.82□□□□□ -1.96
SMAD4-207ENST00000589076 ZNF131P52739 623 aa2.82□□□□□ -1.96
SMAD4-207ENST00000589076 ATXN3P54252 364 aaPredicted RBP2.82□□□□□ -1.96
SMAD4-207ENST00000589076 NDUFV3P56181 108 aaKnown RBP2.82□□□□□ -1.96
SMAD4-207ENST00000589076 PEX3P56589 373 aa2.82□□□□□ -1.96
SMAD4-207ENST00000589076 RPS27AP62979 156 aaKnown RBP2.82□□□□□ -1.96
SMAD4-207ENST00000589076 IL1RL1Q01638 556 aa2.82□□□□□ -1.96
SMAD4-207ENST00000589076 POM121L1PQ3SYA9 428 aa2.82□□□□□ -1.96
SMAD4-207ENST00000589076 CMPK2Q5EBM0 449 aa2.82□□□□□ -1.96
SMAD4-207ENST00000589076 MUC21Q5SSG8 566 aa2.82□□□□□ -1.96
SMAD4-207ENST00000589076 OR6B2Q6IFH4 312 aa2.82□□□□□ -1.96
SMAD4-207ENST00000589076 RHBDD2Q6NTF9 364 aa2.82□□□□□ -1.96
SMAD4-207ENST00000589076 WDR88Q6ZMY6 472 aa2.82□□□□□ -1.96
SMAD4-207ENST00000589076 C1orf186Q6ZWK4 172 aa2.82□□□□□ -1.96
SMAD4-207ENST00000589076 ASRGL1Q7L266 308 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms