RNA–Protein interactions for RNA: ENST00000588408.5

CNTD1-204, Transcript of cyclin N-terminal domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTD1, Length 2,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTD1-204ENST00000588408 RPE65Q16518 533 aa13.12□□□□□ -0.31
CNTD1-204ENST00000588408 DEF8Q6ZN54 512 aa13.12□□□□□ -0.31
CNTD1-204ENST00000588408 CROCCP3Q8IVE0 287 aa13.12□□□□□ -0.31
CNTD1-204ENST00000588408 CACTIN-AS1Q8N1I8 211 aa13.12□□□□□ -0.31
CNTD1-204ENST00000588408 OR2L8Q8NGY9 312 aa13.12□□□□□ -0.31
CNTD1-204ENST00000588408 CCL4L1Q8NHW4 92 aa13.12□□□□□ -0.31
CNTD1-204ENST00000588408 MS4A6EQ96DS6 147 aa13.12□□□□□ -0.31
CNTD1-204ENST00000588408 COL21A1Q96P44 957 aa13.12□□□□□ -0.31
CNTD1-204ENST00000588408 TREX2Q9BQ50 279 aaPredicted RBP13.12□□□□□ -0.31
CNTD1-204ENST00000588408 TRMT61BQ9BVS5 477 aaKnown RBP13.12□□□□□ -0.31
CNTD1-204ENST00000588408 BTBD2Q9BX70 525 aa13.12□□□□□ -0.31
CNTD1-204ENST00000588408 NT5DC2Q9H857 520 aa13.12□□□□□ -0.31
CNTD1-204ENST00000588408 TMEM165Q9HC07 324 aa13.12□□□□□ -0.31
CNTD1-204ENST00000588408 FBXW2Q9UKT8 454 aa13.12□□□□□ -0.31
CNTD1-204ENST00000588408 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.12□□□□□ -0.31
CNTD1-204ENST00000588408 KNL1Q8NG31 2342 aa13.11□□□□□ -0.31
CNTD1-204ENST00000588408 M0R3H8 397 aa13.11□□□□□ -0.31
CNTD1-204ENST00000588408 PLRG1O43660 514 aaKnown RBP13.11□□□□□ -0.31
CNTD1-204ENST00000588408 TPST2O60704 377 aa13.11□□□□□ -0.31
CNTD1-204ENST00000588408 PFDN1O60925 122 aa13.11□□□□□ -0.31
CNTD1-204ENST00000588408 CLEC3AO75596 197 aa13.11□□□□□ -0.31
CNTD1-204ENST00000588408 CHMP24386 653 aa13.11□□□□□ -0.31
CNTD1-204ENST00000588408 CERS1P27544 350 aa13.11□□□□□ -0.31
CNTD1-204ENST00000588408 GRK5P34947 590 aa13.11□□□□□ -0.31
CNTD1-204ENST00000588408 PXNP49023 591 aaPredicted RBP13.11□□□□□ -0.31
CNTD1-204ENST00000588408 ST13P50502 369 aaKnown RBP13.11□□□□□ -0.31
CNTD1-204ENST00000588408 NCBP2P52298 156 aaKnown RBP eCLIP13.11□□□□□ -0.31
CNTD1-204ENST00000588408 SLAMF1Q13291 335 aa13.11□□□□□ -0.31
CNTD1-204ENST00000588408 ZIC1Q15915 447 aa13.11□□□□□ -0.31
CNTD1-204ENST00000588408 SOWAHCQ53LP3 525 aaPredicted RBP13.11□□□□□ -0.31
CNTD1-204ENST00000588408 PPP2R2DQ66LE6 453 aa13.11□□□□□ -0.31
CNTD1-204ENST00000588408 ANKRD54Q6NXT1 300 aa13.11□□□□□ -0.31
CNTD1-204ENST00000588408 C16orf87Q6PH81 154 aa13.11□□□□□ -0.31
CNTD1-204ENST00000588408 RD3Q7Z3Z2 195 aa13.11□□□□□ -0.31
CNTD1-204ENST00000588408 IGFN1Q86VF2 1251 aa13.11□□□□□ -0.31
CNTD1-204ENST00000588408 SHISA5Q8N114 240 aa13.11□□□□□ -0.31
CNTD1-204ENST00000588408 OR2L3Q8NG85 312 aa13.11□□□□□ -0.31
CNTD1-204ENST00000588408 SNRNP27Q8WVK2 155 aaKnown RBP13.11□□□□□ -0.31
CNTD1-204ENST00000588408 IPCEF1Q8WWN9 437 aaPredicted RBP13.11□□□□□ -0.31
CNTD1-204ENST00000588408 ZBED6CLQ96FA7 236 aaPredicted RBP13.11□□□□□ -0.31
CNTD1-204ENST00000588408 TIMM29Q9BSF4 260 aa13.11□□□□□ -0.31
CNTD1-204ENST00000588408 NEUROD4Q9HD90 331 aa13.11□□□□□ -0.31
CNTD1-204ENST00000588408 PRDM7Q9NQW5 492 aa13.11□□□□□ -0.31
CNTD1-204ENST00000588408 MS4A12Q9NXJ0 267 aa13.11□□□□□ -0.31
CNTD1-204ENST00000588408 TRPC4Q9UBN4 977 aa13.11□□□□□ -0.31
CNTD1-204ENST00000588408 TBC1D29Q9UFV1 150 aa13.11□□□□□ -0.31
CNTD1-204ENST00000588408 KCND3Q9UK17 655 aa13.11□□□□□ -0.31
CNTD1-204ENST00000588408 KCNE3Q9Y6H6 103 aa13.11□□□□□ -0.31
CNTD1-204ENST00000588408 A0A1W2PQF6 199 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 GPC1P35052 558 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 NR1D2Q14995 579 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 Q6ZNX1 250 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 CCDC116Q8IYX3 515 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 TAGAPQ8N103 731 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 SVOPQ8N4V2 548 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 CNRIP1Q96F85 164 aaPredicted RBP13.1□□□□□ -0.31
CNTD1-204ENST00000588408 C16orf58Q96GQ5 468 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 SH3YL1Q96HL8 342 aaPredicted RBP13.1□□□□□ -0.31
CNTD1-204ENST00000588408 QRFPRQ96P65 431 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 QRSL1Q9H0R6 528 aaKnown RBP13.1□□□□□ -0.31
CNTD1-204ENST00000588408 RNF167Q9H6Y7 350 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 ZNF556Q9HAH1 456 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 CCNB1IP1Q9NPC3 277 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 C11orf16Q9NQ32 467 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 SLC35C2Q9NQQ7 365 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 CTPS2Q9NRF8 586 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 TBC1D23Q9NUY8 699 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 DZANK1Q9NVP4 752 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 FTSJ1Q9UET6 329 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 APOBEC3BQ9UH17 382 aaKnown RBP13.1□□□□□ -0.31
CNTD1-204ENST00000588408 DUSP12Q9UNI6 340 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 ASB4Q9Y574 426 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 FANCMQ8IYD8 2048 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 CLCA1A8K7I4 914 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 MAN2B1O00754 1011 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 NADKO95544 446 aaPredicted RBP13.1□□□□□ -0.31
CNTD1-204ENST00000588408 EPPINO95925 133 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 EGFP01133 1207 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 PTHP01270 115 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 CDK1P06493 297 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 CNR2P34972 360 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 CTSKP43235 329 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 KCNC4Q03721 635 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 FUT5Q11128 374 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 PIN1Q13526 163 aaPredicted RBP13.1□□□□□ -0.31
CNTD1-204ENST00000588408 LRRC32Q14392 662 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 TOR1AIP1Q5JTV8 583 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 UBE2UQ5VVX9 321 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 MEX3DQ86XN8 651 aaKnown RBP13.1□□□□□ -0.31
CNTD1-204ENST00000588408 ACOT4Q8N9L9 421 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 IL17RCQ8NAC3 791 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 OR4E2Q8NGC2 313 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 SUN3Q8TAQ9 357 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 ELSPBP1Q96BH3 223 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 SLC35G5Q96KT7 338 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 PRR14Q9BWN1 585 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 MVB12BQ9H7P6 319 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 ZCCHC3Q9NUD5 404 aaKnown RBP13.1□□□□□ -0.31
CNTD1-204ENST00000588408 FKBP14Q9NWM8 211 aa13.1□□□□□ -0.31
CNTD1-204ENST00000588408 SPEGQ15772 3267 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms