RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 PSMA8Q8TAA3 256 aa10.61□□□□□ -0.71
VMP1-207ENST00000588131 PNPT1Q8TCS8 783 aaKnown RBP10.61□□□□□ -0.71
VMP1-207ENST00000588131 DOK4Q8TEW6 326 aa10.61□□□□□ -0.71
VMP1-207ENST00000588131 OR1F2PQ96R84 312 aa10.61□□□□□ -0.71
VMP1-207ENST00000588131 SLC35A5Q9BS91 424 aa10.61□□□□□ -0.71
VMP1-207ENST00000588131 MMADHCQ9H3L0 296 aaPredicted RBP10.61□□□□□ -0.71
VMP1-207ENST00000588131 EPS8L2Q9H6S3 715 aa10.61□□□□□ -0.71
VMP1-207ENST00000588131 AKIRIN1Q9H9L7 192 aaPredicted RBP10.61□□□□□ -0.71
VMP1-207ENST00000588131 NECTIN3Q9NQS3 549 aa10.61□□□□□ -0.71
VMP1-207ENST00000588131 CTSFQ9UBX1 484 aa10.61□□□□□ -0.71
VMP1-207ENST00000588131 CD300AQ9UGN4 299 aa10.61□□□□□ -0.71
VMP1-207ENST00000588131 SLC7A8Q9UHI5 535 aa10.61□□□□□ -0.71
VMP1-207ENST00000588131 MRPS33Q9Y291 106 aaKnown RBP10.61□□□□□ -0.71
VMP1-207ENST00000588131 L3MBTL1Q9Y468 752 aa10.61□□□□□ -0.71
VMP1-207ENST00000588131 SNX8Q9Y5X2 465 aa10.61□□□□□ -0.71
VMP1-207ENST00000588131 B3GALT1Q9Y5Z6 326 aa10.61□□□□□ -0.71
VMP1-207ENST00000588131 CROCCQ5TZA2 2017 aa10.61□□□□□ -0.71
VMP1-207ENST00000588131 FRYLO94915 3013 aa10.61□□□□□ -0.71
VMP1-207ENST00000588131 KIF26BQ2KJY2 2108 aa10.61□□□□□ -0.71
VMP1-207ENST00000588131 IGLV3-12A0A075B6K2 115 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 TEX51A0A1B0GUA7 166 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 A8MUI8 341 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 MEN1O00255 615 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 CLDN4O14493 209 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 SLC30A4O14863 429 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 PLD2O14939 933 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 CNOT3O75175 753 aaKnown RBP10.6□□□□□ -0.71
VMP1-207ENST00000588131 BMP10O95393 424 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 ONECUT2O95948 504 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 JMJD7P0C870 316 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 CEACAM1P13688 526 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 PORP16435 677 aaPredicted RBP10.6□□□□□ -0.71
VMP1-207ENST00000588131 TCN1P20061 433 aaPredicted RBP10.6□□□□□ -0.71
VMP1-207ENST00000588131 UQCRC2P22695 453 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 PPP2R1BP30154 601 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 MPIP34949 423 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 MC3RP41968 323 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 GSK3BP49841 420 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 GZMMP51124 257 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 NOVA1P51513 510 aaKnown RBP10.6□□□□□ -0.71
VMP1-207ENST00000588131 MVDP53602 400 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 CASP9P55211 416 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 HSD17B7P56937 341 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 CORO7P57737 925 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 EEFSECP57772 596 aaKnown RBP10.6□□□□□ -0.71
VMP1-207ENST00000588131 RAB15P59190 212 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 IGLV3-21P80748 117 aaPredicted RBP10.6□□□□□ -0.71
VMP1-207ENST00000588131 DCDP81605 110 aaKnown RBP10.6□□□□□ -0.71
VMP1-207ENST00000588131 LIPEQ05469 1076 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 ABHD18Q0P651 414 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 TARDBPQ13148 414 aaKnown RBP eCLIP10.6□□□□□ -0.71
VMP1-207ENST00000588131 ZNF628Q5EBL2 1059 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 C3orf38Q5JPI3 329 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 SAMD4BQ5PRF9 694 aaKnown RBP10.6□□□□□ -0.71
VMP1-207ENST00000588131 DCAF12Q5T6F0 453 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 CPZQ66K79 652 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 TMEM107Q6UX40 140 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 PRSS58Q8IYP2 241 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 SAMD14Q8IZD0 417 aaPredicted RBP10.6□□□□□ -0.71
VMP1-207ENST00000588131 ARHGAP24Q8N264 748 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 FAM13CQ8NE31 585 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 ADCY4Q8NFM4 1077 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 KAT2AQ92830 837 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 TSLPQ969D9 159 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 PPWD1Q96BP3 646 aaKnown RBP10.6□□□□□ -0.71
VMP1-207ENST00000588131 CCDC124Q96CT7 223 aaKnown RBP10.6□□□□□ -0.71
VMP1-207ENST00000588131 TAAR9Q96RI9 348 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 THUMPD3Q9BV44 507 aaKnown RBP10.6□□□□□ -0.71
VMP1-207ENST00000588131 ULBP3Q9BZM4 244 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 PIF1Q9H611 641 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 KAT8Q9H7Z6 458 aaKnown RBP10.6□□□□□ -0.71
VMP1-207ENST00000588131 ANKRA2Q9H9E1 313 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 TPT1P8Q9HAU6 139 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 NEUROD4Q9HD90 331 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 MKKSQ9NPJ1 570 aaPredicted RBP10.6□□□□□ -0.71
VMP1-207ENST00000588131 GPATCH2Q9NW75 528 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 SATB2Q9UPW6 733 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 GMEB1Q9Y692 573 aa10.6□□□□□ -0.71
VMP1-207ENST00000588131 IGKV3D-11A0A0A0MRZ8 115 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 FAM149AA5PLN7 773 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 C9orf172C9J069 976 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 RECKO95980 971 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 ATP1B1P05026 303 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 CT62P0C5K7 136 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 SLC35E2P0CK97 266 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 HSD17B1P14061 328 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 NT5EP21589 574 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 ME2P23368 584 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 CHI3L1P36222 383 aaPredicted RBP10.59□□□□□ -0.71
VMP1-207ENST00000588131 MRPS35P82673 323 aaKnown RBP10.59□□□□□ -0.71
VMP1-207ENST00000588131 MS4A2Q01362 244 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 RHAGQ02094 409 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 MGAT2Q10469 447 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 STX4Q12846 297 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 EIF3IQ13347 325 aaKnown RBP10.59□□□□□ -0.71
VMP1-207ENST00000588131 SPDYE7PQ495Y7 208 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 MINDY4Q4G0A6 757 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 COX20Q5RI15 118 aa10.59□□□□□ -0.71
VMP1-207ENST00000588131 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.59□□□□□ -0.71
VMP1-207ENST00000588131 MFSD4BQ5TF39 518 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms