RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 OR12D1P0DN82 309 aa20.99■□□□□ 0.95
CIRBP-208ENST00000586548 ALPPL2P10696 532 aa20.99■□□□□ 0.95
CIRBP-208ENST00000586548 RAD23AP54725 363 aa20.99■□□□□ 0.95
CIRBP-208ENST00000586548 C21orf59P57076 290 aa20.99■□□□□ 0.95
CIRBP-208ENST00000586548 VSX2P58304 361 aaPredicted RBP20.99■□□□□ 0.95
CIRBP-208ENST00000586548 MAPK11Q15759 364 aa20.99■□□□□ 0.95
CIRBP-208ENST00000586548 GPR19Q15760 415 aa20.99■□□□□ 0.95
CIRBP-208ENST00000586548 ZC3H12BQ5HYM0 836 aaKnown RBP20.99■□□□□ 0.95
CIRBP-208ENST00000586548 WDR45BQ5MNZ6 344 aa20.99■□□□□ 0.95
CIRBP-208ENST00000586548 OGFOD3Q6PK18 319 aa20.99■□□□□ 0.95
CIRBP-208ENST00000586548 TMEM107Q6UX40 140 aa20.99■□□□□ 0.95
CIRBP-208ENST00000586548 LRRC25Q8N386 305 aaPredicted RBP20.99■□□□□ 0.95
CIRBP-208ENST00000586548 SLC38A3Q99624 504 aa20.99■□□□□ 0.95
CIRBP-208ENST00000586548 RUBCNLQ9H714 662 aa20.99■□□□□ 0.95
CIRBP-208ENST00000586548 C3orf14Q9HBI5 128 aa20.99■□□□□ 0.95
CIRBP-208ENST00000586548 TMEFF2Q9UIK5 374 aaPredicted RBP20.99■□□□□ 0.95
CIRBP-208ENST00000586548 PCDHGB3Q9Y5G1 929 aa20.99■□□□□ 0.95
CIRBP-208ENST00000586548 KNL1Q8NG31 2342 aa20.99■□□□□ 0.95
CIRBP-208ENST00000586548 MYOCOSA0A1B0GUC4 107 aa20.98■□□□□ 0.95
CIRBP-208ENST00000586548 ADAMDEC1O15204 470 aa20.98■□□□□ 0.95
CIRBP-208ENST00000586548 CLIC3O95833 236 aa20.98■□□□□ 0.95
CIRBP-208ENST00000586548 C9P02748 559 aa20.98■□□□□ 0.95
CIRBP-208ENST00000586548 LINGO3P0C6S8 592 aa20.98■□□□□ 0.95
CIRBP-208ENST00000586548 NELFEP18615 380 aaKnown RBP20.98■□□□□ 0.95
CIRBP-208ENST00000586548 CSNK1EP49674 416 aaKnown RBP20.98■□□□□ 0.95
CIRBP-208ENST00000586548 KCTD21Q4G0X4 260 aa20.98■□□□□ 0.95
CIRBP-208ENST00000586548 RPS26P11Q5JNZ5 115 aaPredicted RBP20.98■□□□□ 0.95
CIRBP-208ENST00000586548 TTC33Q6PID6 262 aaPredicted RBP20.98■□□□□ 0.95
CIRBP-208ENST00000586548 OFCC1Q8IZS5 231 aa20.98■□□□□ 0.95
CIRBP-208ENST00000586548 ZNF555Q8NEP9 628 aa20.98■□□□□ 0.95
CIRBP-208ENST00000586548 OR4K14Q8NGD5 310 aa20.98■□□□□ 0.95
CIRBP-208ENST00000586548 OR9A2Q8NGT5 310 aa20.98■□□□□ 0.95
CIRBP-208ENST00000586548 ELP4Q96EB1 424 aa20.98■□□□□ 0.95
CIRBP-208ENST00000586548 MAGED4Q96JG8 741 aa20.98■□□□□ 0.95
CIRBP-208ENST00000586548 CLK4Q9HAZ1 481 aaKnown RBP20.98■□□□□ 0.95
CIRBP-208ENST00000586548 FAM60AQ9NP50 221 aa20.98■□□□□ 0.95
CIRBP-208ENST00000586548 FAM118AQ9NWS6 357 aa20.98■□□□□ 0.95
CIRBP-208ENST00000586548 TRPC4Q9UBN4 977 aa20.98■□□□□ 0.95
CIRBP-208ENST00000586548 SPACA6W5XKT8 324 aa20.98■□□□□ 0.95
CIRBP-208ENST00000586548 SLC28A2O43868 658 aa20.98■□□□□ 0.95
CIRBP-208ENST00000586548 GALR3O60755 368 aaPredicted RBP20.98■□□□□ 0.95
CIRBP-208ENST00000586548 PIAS2O75928 621 aa20.98■□□□□ 0.95
CIRBP-208ENST00000586548 CLPTM1O96005 669 aa20.98■□□□□ 0.95
CIRBP-208ENST00000586548 AFF3P51826 1226 aaKnown RBP20.98■□□□□ 0.95
CIRBP-208ENST00000586548 DEFB133Q30KQ1 61 aa20.98■□□□□ 0.95
CIRBP-208ENST00000586548 ANKRD34AQ69YU3 496 aa20.98■□□□□ 0.95
CIRBP-208ENST00000586548 MAMSTRQ6ZN01 415 aa20.98■□□□□ 0.95
CIRBP-208ENST00000586548 SLC44A2Q8IWA5 706 aaPredicted RBP20.98■□□□□ 0.95
CIRBP-208ENST00000586548 SMYD1Q8NB12 490 aa20.98■□□□□ 0.95
CIRBP-208ENST00000586548 ZNF300Q96RE9 604 aaPredicted RBP20.98■□□□□ 0.95
CIRBP-208ENST00000586548 ZNF607Q96SK3 696 aa20.98■□□□□ 0.95
CIRBP-208ENST00000586548 CSF3RQ99062 836 aa20.98■□□□□ 0.95
CIRBP-208ENST00000586548 BARD1Q99728 777 aaKnown RBP20.98■□□□□ 0.95
CIRBP-208ENST00000586548 FAM192AQ9GZU8 254 aa20.98■□□□□ 0.95
CIRBP-208ENST00000586548 SPAG17Q6Q759 2223 aa20.97■□□□□ 0.95
CIRBP-208ENST00000586548 BCAT2O15382 392 aaPredicted RBP20.97■□□□□ 0.95
CIRBP-208ENST00000586548 HMGN2P05204 90 aaKnown RBP20.97■□□□□ 0.95
CIRBP-208ENST00000586548 TNFRSF1BP20333 461 aa20.97■□□□□ 0.95
CIRBP-208ENST00000586548 CD247P20963 164 aa20.97■□□□□ 0.95
CIRBP-208ENST00000586548 IGFBP5P24593 272 aa20.97■□□□□ 0.95
CIRBP-208ENST00000586548 PPP2R1BP30154 601 aa20.97■□□□□ 0.95
CIRBP-208ENST00000586548 RRM2P31350 389 aa20.97■□□□□ 0.95
CIRBP-208ENST00000586548 PTGER1P34995 402 aa20.97■□□□□ 0.95
CIRBP-208ENST00000586548 MC3RP41968 323 aa20.97■□□□□ 0.95
CIRBP-208ENST00000586548 PRKAG1P54619 331 aa20.97■□□□□ 0.95
CIRBP-208ENST00000586548 DMWDQ09019 674 aa20.97■□□□□ 0.95
CIRBP-208ENST00000586548 KCNAB2Q13303 367 aa20.97■□□□□ 0.95
CIRBP-208ENST00000586548 C14orf28Q4W4Y0 310 aa20.97■□□□□ 0.95
CIRBP-208ENST00000586548 TSPAN14Q8NG11 270 aa20.97■□□□□ 0.95
CIRBP-208ENST00000586548 OR5D16Q8NGK9 328 aa20.97■□□□□ 0.95
CIRBP-208ENST00000586548 RASSF5Q8WWW0 418 aa20.97■□□□□ 0.95
CIRBP-208ENST00000586548 NPLQ9BXD5 320 aaPredicted RBP20.97■□□□□ 0.95
CIRBP-208ENST00000586548 AMBRA1Q9C0C7 1298 aa20.97■□□□□ 0.95
CIRBP-208ENST00000586548 IL21RQ9HBE5 538 aa20.97■□□□□ 0.95
CIRBP-208ENST00000586548 PDP1Q9P0J1 537 aaPredicted RBP20.97■□□□□ 0.95
CIRBP-208ENST00000586548 PRAMEF25A6NGN4 478 aa20.96■□□□□ 0.95
CIRBP-208ENST00000586548 ZNF860A6NHJ4 632 aa20.96■□□□□ 0.95
CIRBP-208ENST00000586548 SLC9B1P1A6NJY1 282 aa20.96■□□□□ 0.95
CIRBP-208ENST00000586548 DNAJB6O75190 326 aa20.96■□□□□ 0.95
CIRBP-208ENST00000586548 MFN2O95140 757 aa20.96■□□□□ 0.95
CIRBP-208ENST00000586548 RPL5P46777 297 aaKnown RBP20.96■□□□□ 0.95
CIRBP-208ENST00000586548 OR1E2P47887 323 aa20.96■□□□□ 0.95
CIRBP-208ENST00000586548 XKP51811 444 aa20.96■□□□□ 0.95
CIRBP-208ENST00000586548 OLR1P78380 273 aa20.96■□□□□ 0.95
CIRBP-208ENST00000586548 GNA13Q14344 377 aa20.96■□□□□ 0.95
CIRBP-208ENST00000586548 LASP1Q14847 261 aaKnown RBP20.96■□□□□ 0.95
CIRBP-208ENST00000586548 RNF220Q5VTB9 566 aa20.96■□□□□ 0.95
CIRBP-208ENST00000586548 KDM4DQ6B0I6 523 aa20.96■□□□□ 0.95
CIRBP-208ENST00000586548 USP53Q70EK8 1073 aa20.96■□□□□ 0.95
CIRBP-208ENST00000586548 PRSS41Q7RTY9 318 aa20.96■□□□□ 0.95
CIRBP-208ENST00000586548 MCATQ8IVS2 390 aaKnown RBP20.96■□□□□ 0.95
CIRBP-208ENST00000586548 ZNF786Q8N393 782 aa20.96■□□□□ 0.95
CIRBP-208ENST00000586548 NUP43Q8NFH3 380 aa20.96■□□□□ 0.95
CIRBP-208ENST00000586548 XAGE5Q8WWM1 108 aa20.96■□□□□ 0.95
CIRBP-208ENST00000586548 MUS81Q96NY9 551 aa20.96■□□□□ 0.95
CIRBP-208ENST00000586548 EXD2Q9NVH0 621 aa20.96■□□□□ 0.95
CIRBP-208ENST00000586548 NTMQ9P121 344 aa20.96■□□□□ 0.95
CIRBP-208ENST00000586548 NAALAD2Q9Y3Q0 740 aa20.96■□□□□ 0.95
CIRBP-208ENST00000586548 A0A1B0GTW7 788 aa20.95■□□□□ 0.94
CIRBP-208ENST00000586548 PRAMEF27A3QJZ7 478 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms