RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 ABHD18Q0P651 414 aa11.9□□□□□ -0.5
VMP1-202ENST00000585847 SLAMF1Q13291 335 aa11.9□□□□□ -0.5
VMP1-202ENST00000585847 CEBPEQ15744 281 aa11.9□□□□□ -0.5
VMP1-202ENST00000585847 PAGE3Q5JUK9 113 aa11.9□□□□□ -0.5
VMP1-202ENST00000585847 NDUFAF5Q5TEU4 345 aa11.9□□□□□ -0.5
VMP1-202ENST00000585847 C1orf189Q5VU69 101 aa11.9□□□□□ -0.5
VMP1-202ENST00000585847 SLC48A1Q6P1K1 146 aa11.9□□□□□ -0.5
VMP1-202ENST00000585847 SLC2A7Q6PXP3 512 aa11.9□□□□□ -0.5
VMP1-202ENST00000585847 TTLL10Q6ZVT0 673 aa11.9□□□□□ -0.5
VMP1-202ENST00000585847 TICAM1Q8IUC6 712 aa11.9□□□□□ -0.5
VMP1-202ENST00000585847 SLC15A3Q8IY34 581 aa11.9□□□□□ -0.5
VMP1-202ENST00000585847 GPR135Q8IZ08 494 aa11.9□□□□□ -0.5
VMP1-202ENST00000585847 GALNT6Q8NCL4 622 aa11.9□□□□□ -0.5
VMP1-202ENST00000585847 CDC26Q8NHZ8 85 aa11.9□□□□□ -0.5
VMP1-202ENST00000585847 FBXO27Q8NI29 283 aa11.9□□□□□ -0.5
VMP1-202ENST00000585847 ZCCHC10Q8TBK6 192 aa11.9□□□□□ -0.5
VMP1-202ENST00000585847 TANKQ92844 425 aa11.9□□□□□ -0.5
VMP1-202ENST00000585847 TMEM125Q96AQ2 219 aa11.9□□□□□ -0.5
VMP1-202ENST00000585847 EGLN2Q96KS0 407 aa11.9□□□□□ -0.5
VMP1-202ENST00000585847 ZNF578Q96N58 590 aaPredicted RBP11.9□□□□□ -0.5
VMP1-202ENST00000585847 ULBP3Q9BZM4 244 aa11.9□□□□□ -0.5
VMP1-202ENST00000585847 DCLRE1BQ9H816 532 aa11.9□□□□□ -0.5
VMP1-202ENST00000585847 SERHLQ9NQF3 203 aa11.9□□□□□ -0.5
VMP1-202ENST00000585847 SH3BP4Q9P0V3 963 aa11.9□□□□□ -0.5
VMP1-202ENST00000585847 ACTR3BQ9P1U1 418 aa11.9□□□□□ -0.5
VMP1-202ENST00000585847 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.9□□□□□ -0.5
VMP1-202ENST00000585847 CD300AQ9UGN4 299 aa11.9□□□□□ -0.5
VMP1-202ENST00000585847 POMPQ9Y244 141 aa11.9□□□□□ -0.5
VMP1-202ENST00000585847 ASB4Q9Y574 426 aa11.9□□□□□ -0.5
VMP1-202ENST00000585847 AHCTF1Q8WYP5 2266 aa11.9□□□□□ -0.5
VMP1-202ENST00000585847 A0A0G2JN53 185 aa11.89□□□□□ -0.51
VMP1-202ENST00000585847 A0A1W2PRB8 838 aa11.89□□□□□ -0.51
VMP1-202ENST00000585847 AQP12BA6NM10 295 aa11.89□□□□□ -0.51
VMP1-202ENST00000585847 MEN1O00255 615 aa11.89□□□□□ -0.51
VMP1-202ENST00000585847 SAP18O00422 153 aaKnown RBP11.89□□□□□ -0.51
VMP1-202ENST00000585847 AKAP10O43572 662 aa11.89□□□□□ -0.51
VMP1-202ENST00000585847 TMPRSS11DO60235 418 aa11.89□□□□□ -0.51
VMP1-202ENST00000585847 RAD1O60671 282 aa11.89□□□□□ -0.51
VMP1-202ENST00000585847 CNOT3O75175 753 aaKnown RBP11.89□□□□□ -0.51
VMP1-202ENST00000585847 KLHL18O94889 574 aa11.89□□□□□ -0.51
VMP1-202ENST00000585847 LAMP1P11279 417 aa11.89□□□□□ -0.51
VMP1-202ENST00000585847 HOXB9P17482 250 aaPredicted RBP11.89□□□□□ -0.51
VMP1-202ENST00000585847 IL1RNP18510 177 aa11.89□□□□□ -0.51
VMP1-202ENST00000585847 DGKQP52824 942 aa11.89□□□□□ -0.51
VMP1-202ENST00000585847 WNT3P56703 355 aa11.89□□□□□ -0.51
VMP1-202ENST00000585847 RAB8AP61006 207 aa11.89□□□□□ -0.51
VMP1-202ENST00000585847 BTN3A2P78410 334 aa11.89□□□□□ -0.51
VMP1-202ENST00000585847 RBBP4Q09028 425 aa11.89□□□□□ -0.51
VMP1-202ENST00000585847 FLOT2Q14254 428 aa11.89□□□□□ -0.51
VMP1-202ENST00000585847 TGIF1Q15583 401 aa11.89□□□□□ -0.51
VMP1-202ENST00000585847 RUNDC3AQ59EK9 446 aa11.89□□□□□ -0.51
VMP1-202ENST00000585847 TMEM164Q5U3C3 297 aa11.89□□□□□ -0.51
VMP1-202ENST00000585847 OR4F3Q6IEY1 312 aa11.89□□□□□ -0.51
VMP1-202ENST00000585847 LCN8Q6JVE9 175 aa11.89□□□□□ -0.51
VMP1-202ENST00000585847 NANOGP8Q6NSW7 305 aa11.89□□□□□ -0.51
VMP1-202ENST00000585847 FAM199XQ6PEV8 388 aaPredicted RBP11.89□□□□□ -0.51
VMP1-202ENST00000585847 FAM198BQ6UWH4 519 aa11.89□□□□□ -0.51
VMP1-202ENST00000585847 ZNF793Q6ZN11 406 aa11.89□□□□□ -0.51
VMP1-202ENST00000585847 AQP12AQ8IXF9 295 aa11.89□□□□□ -0.51
VMP1-202ENST00000585847 METTL27Q8N6F8 245 aaPredicted RBP11.89□□□□□ -0.51
VMP1-202ENST00000585847 SFXN5Q8TD22 340 aa11.89□□□□□ -0.51
VMP1-202ENST00000585847 SLC39A7Q92504 469 aa11.89□□□□□ -0.51
VMP1-202ENST00000585847 REXO5Q96IC2 774 aaKnown RBP11.89□□□□□ -0.51
VMP1-202ENST00000585847 ECSITQ9BQ95 431 aa11.89□□□□□ -0.51
VMP1-202ENST00000585847 PELOQ9BRX2 385 aaKnown RBP11.89□□□□□ -0.51
VMP1-202ENST00000585847 NDC1Q9BTX1 674 aa11.89□□□□□ -0.51
VMP1-202ENST00000585847 EFHD1Q9BUP0 239 aa11.89□□□□□ -0.51
VMP1-202ENST00000585847 PAIP1Q9H074 479 aaKnown RBP11.89□□□□□ -0.51
VMP1-202ENST00000585847 NANOGQ9H9S0 305 aa11.89□□□□□ -0.51
VMP1-202ENST00000585847 SLC35C2Q9NQQ7 365 aa11.89□□□□□ -0.51
VMP1-202ENST00000585847 THSD1Q9NS62 852 aa11.89□□□□□ -0.51
VMP1-202ENST00000585847 IRAK4Q9NWZ3 460 aa11.89□□□□□ -0.51
VMP1-202ENST00000585847 DAPP1Q9UN19 280 aa11.89□□□□□ -0.51
VMP1-202ENST00000585847 SNX13Q9Y5W8 968 aa11.89□□□□□ -0.51
VMP1-202ENST00000585847 ZNF780BQ9Y6R6 833 aa11.89□□□□□ -0.51
VMP1-202ENST00000585847 HELZ2Q9BYK8 2649 aaKnown RBP11.89□□□□□ -0.51
VMP1-202ENST00000585847 A0A0A6YYC8 382 aaPredicted RBP11.88□□□□□ -0.51
VMP1-202ENST00000585847 LOC101059948A0A1B0GTJ6 334 aa11.88□□□□□ -0.51
VMP1-202ENST00000585847 A0A1B0GX78 115 aa11.88□□□□□ -0.51
VMP1-202ENST00000585847 FAM220BPB1ANY3 271 aa11.88□□□□□ -0.51
VMP1-202ENST00000585847 ANKRD65E5RJM6 399 aa11.88□□□□□ -0.51
VMP1-202ENST00000585847 I3L1I5 382 aaPredicted RBP11.88□□□□□ -0.51
VMP1-202ENST00000585847 RTCAO00442 366 aaKnown RBP11.88□□□□□ -0.51
VMP1-202ENST00000585847 PROM1O43490 865 aa11.88□□□□□ -0.51
VMP1-202ENST00000585847 LRATO95237 230 aa11.88□□□□□ -0.51
VMP1-202ENST00000585847 CYC1P08574 325 aa11.88□□□□□ -0.51
VMP1-202ENST00000585847 HBQ1P09105 142 aa11.88□□□□□ -0.51
VMP1-202ENST00000585847 UQCRC2P22695 453 aa11.88□□□□□ -0.51
VMP1-202ENST00000585847 F8A1P23610 371 aa11.88□□□□□ -0.51
VMP1-202ENST00000585847 CD82P27701 267 aa11.88□□□□□ -0.51
VMP1-202ENST00000585847 ITPKBP27987 946 aa11.88□□□□□ -0.51
VMP1-202ENST00000585847 PTPN6P29350 595 aa11.88□□□□□ -0.51
VMP1-202ENST00000585847 MPIP34949 423 aa11.88□□□□□ -0.51
VMP1-202ENST00000585847 OR1D4P47884 311 aa11.88□□□□□ -0.51
VMP1-202ENST00000585847 EFNA3P52797 238 aa11.88□□□□□ -0.51
VMP1-202ENST00000585847 PCBP4P57723 403 aaKnown RBP11.88□□□□□ -0.51
VMP1-202ENST00000585847 FOXL2P58012 376 aa11.88□□□□□ -0.51
VMP1-202ENST00000585847 AP2B1P63010 937 aa11.88□□□□□ -0.51
VMP1-202ENST00000585847 SRSF6Q13247 344 aaKnown RBP11.88□□□□□ -0.51
VMP1-202ENST00000585847 CEACAM7Q14002 265 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms