RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 DHRS13Q6UX07 377 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 ANGPTL8Q6UXH0 198 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 ZNF551Q7Z340 670 aaPredicted RBP9.81□□□□□ -0.84
LIG3-203ENST00000585370 SPRED1Q7Z699 444 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 PATL1Q86TB9 770 aaKnown RBP9.81□□□□□ -0.84
LIG3-203ENST00000585370 MCATQ8IVS2 390 aaKnown RBP9.81□□□□□ -0.84
LIG3-203ENST00000585370 KBTBD2Q8IY47 623 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 SVOPLQ8N434 492 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 DNAJC22Q8N4W6 341 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 CSNK1A1LQ8N752 337 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 AMER3Q8N944 861 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 C19orf47Q8N9M1 422 aaKnown RBP9.81□□□□□ -0.84
LIG3-203ENST00000585370 KCT2Q8NC54 265 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 FBXO30Q8TB52 745 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 SAP25Q8TEE9 199 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 LZICQ8WZA0 190 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 ZNF570Q96NI8 536 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 AMDHD1Q96NU7 426 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 OSBPL11Q9BXB4 747 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 SEMA6AQ9H2E6 1030 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 COQ10BQ9H8M1 238 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 C3orf14Q9HBI5 128 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 CES1P1Q9UKY3 287 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 BAG5Q9UL15 447 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 PADI4Q9UM07 663 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 ATG4BQ9Y4P1 393 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 GCN1Q92616 2671 aaKnown RBP9.8□□□□□ -0.84
LIG3-203ENST00000585370 A0A0G2JN53 185 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 RNF103-CHMP3A0A140T963 221 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 TLCD2A6NGC4 264 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 SUV39H1O43463 412 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 PDE9AO76083 593 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 SLITRK5O94991 958 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 BMP10O95393 424 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 AIFM1O95831 613 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 ARAFP10398 606 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 CERS1P27544 350 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 GPC1P35052 558 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 SOAT1P35610 550 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 SOX11P35716 441 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 LSSP48449 732 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 AQP4P55087 323 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 DSTNP60981 165 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 CDK6Q00534 326 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 TNFRSF17Q02223 184 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 FOLH1Q04609 750 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 SOWAHCQ53LP3 525 aaPredicted RBP9.8□□□□□ -0.84
LIG3-203ENST00000585370 CRB2Q5IJ48 1285 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 TCTE1Q5JU00 501 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.8□□□□□ -0.84
LIG3-203ENST00000585370 GARNL3Q5VVW2 1013 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 OR52E8Q6IFG1 317 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 C6orf120Q7Z4R8 191 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 ZNF438Q7Z4V0 828 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 TMPRSS12Q86WS5 348 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 MMP21Q8N119 569 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 ARL10Q8N8L6 244 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 C7orf57Q8NEG2 295 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 OR56A1Q8NGH5 318 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 TANKQ92844 425 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 ZNF597Q96LX8 424 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 MAPKAP1Q9BPZ7 522 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 MACROD1Q9BQ69 325 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 DUSP23Q9BVJ7 150 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 TRIM4Q9C037 500 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 GLIPR2Q9H4G4 154 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 CXorf36Q9H7Y0 433 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 A4GALTQ9NPC4 353 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 BATF3Q9NR55 127 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 KCMF1Q9P0J7 381 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 FTSJ1Q9UET6 329 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 ZNF639Q9UID6 485 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 FBXW2Q9UKT8 454 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 DAPP1Q9UN19 280 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 PLCL2Q9UPR0 1127 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 ANGPT4Q9Y264 503 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 SNX8Q9Y5X2 465 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 MGAQ8IWI9 3026 aa9.8□□□□□ -0.84
LIG3-203ENST00000585370 TP53BP1Q12888 1972 aaPredicted RBP9.79□□□□□ -0.84
LIG3-203ENST00000585370 LOC105369274A0A096LPK9 316 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 LOC102723532A0A0G2JNH3 316 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 MAGEA13PA6NCF6 341 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 GNGT2O14610 69 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 PGRMC2O15173 223 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 EMC8O43402 210 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 GALR3O60755 368 aaPredicted RBP9.79□□□□□ -0.84
LIG3-203ENST00000585370 ERAL1O75616 437 aaKnown RBP9.79□□□□□ -0.84
LIG3-203ENST00000585370 SOX30O94993 753 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 RASAL1O95294 804 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 CST1P01037 141 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 EIF2S1P05198 315 aaKnown RBP9.79□□□□□ -0.84
LIG3-203ENST00000585370 RPSAP08865 295 aaKnown RBP9.79□□□□□ -0.84
LIG3-203ENST00000585370 ALPPL2P10696 532 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 PVRP15151 417 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 ST6GAL1P15907 406 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 PNLIPP16233 465 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 GLB1P16278 677 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 PPP2R1BP30154 601 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 MAGEA2P43356 314 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 NCBP2P52298 156 aaKnown RBP eCLIP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms