RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 OR4N5Q8IXE1 308 aa13.82□□□□□ -0.2
VAPA-209ENST00000585042 HUS1BQ8NHY5 278 aa13.82□□□□□ -0.2
VAPA-209ENST00000585042 NEIL3Q8TAT5 605 aa13.82□□□□□ -0.2
VAPA-209ENST00000585042 TP53INP1Q96A56 240 aa13.82□□□□□ -0.2
VAPA-209ENST00000585042 PPWD1Q96BP3 646 aaKnown RBP13.82□□□□□ -0.2
VAPA-209ENST00000585042 LRRC46Q96FV0 321 aa13.82□□□□□ -0.2
VAPA-209ENST00000585042 ZNF703Q9H7S9 590 aaPredicted RBP13.82□□□□□ -0.2
VAPA-209ENST00000585042 DDX31Q9H8H2 851 aaKnown RBP13.82□□□□□ -0.2
VAPA-209ENST00000585042 PROK2Q9HC23 129 aa13.82□□□□□ -0.2
VAPA-209ENST00000585042 PRM3Q9NNZ6 103 aa13.82□□□□□ -0.2
VAPA-209ENST00000585042 LYARQ9NX58 379 aaKnown RBP13.82□□□□□ -0.2
VAPA-209ENST00000585042 ACOT9Q9Y305 439 aa13.82□□□□□ -0.2
VAPA-209ENST00000585042 L3MBTL1Q9Y468 752 aa13.82□□□□□ -0.2
VAPA-209ENST00000585042 CHCHD2Q9Y6H1 151 aaPredicted RBP13.82□□□□□ -0.2
VAPA-209ENST00000585042 SUPT3HB4E1H0 165 aa13.81□□□□□ -0.2
VAPA-209ENST00000585042 PLPP1O14494 284 aa13.81□□□□□ -0.2
VAPA-209ENST00000585042 RAD51CO43502 376 aa13.81□□□□□ -0.2
VAPA-209ENST00000585042 SUPT3HO75486 399 aa13.81□□□□□ -0.2
VAPA-209ENST00000585042 CTAG2O75638 210 aa13.81□□□□□ -0.2
VAPA-209ENST00000585042 ADH7P40394 386 aa13.81□□□□□ -0.2
VAPA-209ENST00000585042 DLX5P56178 289 aa13.81□□□□□ -0.2
VAPA-209ENST00000585042 SLC37A1P57057 533 aa13.81□□□□□ -0.2
VAPA-209ENST00000585042 GPX6P59796 221 aa13.81□□□□□ -0.2
VAPA-209ENST00000585042 DLG1Q12959 904 aa13.81□□□□□ -0.2
VAPA-209ENST00000585042 NTRK2Q16620 822 aa13.81□□□□□ -0.2
VAPA-209ENST00000585042 FAM83EQ2M2I3 478 aa13.81□□□□□ -0.2
VAPA-209ENST00000585042 RNF111Q6ZNA4 994 aa13.81□□□□□ -0.2
VAPA-209ENST00000585042 LIX1LQ8IVB5 337 aa13.81□□□□□ -0.2
VAPA-209ENST00000585042 TAGAPQ8N103 731 aa13.81□□□□□ -0.2
VAPA-209ENST00000585042 RIT1Q92963 219 aa13.81□□□□□ -0.2
VAPA-209ENST00000585042 SECISBP2Q96T21 854 aaKnown RBP13.81□□□□□ -0.2
VAPA-209ENST00000585042 FOXC2Q99958 501 aa13.81□□□□□ -0.2
VAPA-209ENST00000585042 WWTR1Q9GZV5 400 aa13.81□□□□□ -0.2
VAPA-209ENST00000585042 CXXC4Q9H2H0 198 aa13.81□□□□□ -0.2
VAPA-209ENST00000585042 WDR41Q9HAD4 459 aa13.81□□□□□ -0.2
VAPA-209ENST00000585042 DMRT3Q9NQL9 472 aa13.81□□□□□ -0.2
VAPA-209ENST00000585042 FOXD3Q9UJU5 478 aaPredicted RBP13.81□□□□□ -0.2
VAPA-209ENST00000585042 ASB4Q9Y574 426 aa13.81□□□□□ -0.2
VAPA-209ENST00000585042 ANGPTL3Q9Y5C1 460 aa13.81□□□□□ -0.2
VAPA-209ENST00000585042 MTORP42345 2549 aa13.8□□□□□ -0.2
VAPA-209ENST00000585042 A0A087X1B8 175 aa13.8□□□□□ -0.2
VAPA-209ENST00000585042 UBXN8O00124 270 aa13.8□□□□□ -0.2
VAPA-209ENST00000585042 FOXE1O00358 373 aaPredicted RBP13.8□□□□□ -0.2
VAPA-209ENST00000585042 SAP18O00422 153 aaKnown RBP13.8□□□□□ -0.2
VAPA-209ENST00000585042 TP53I11O14683 189 aa13.8□□□□□ -0.2
VAPA-209ENST00000585042 SNX4O95219 450 aa13.8□□□□□ -0.2
VAPA-209ENST00000585042 EPPINO95925 133 aa13.8□□□□□ -0.2
VAPA-209ENST00000585042 RFPL3SP0C7P2 107 aa13.8□□□□□ -0.2
VAPA-209ENST00000585042 SLC35E2P0CK97 266 aa13.8□□□□□ -0.2
VAPA-209ENST00000585042 MTHFD2P13995 350 aa13.8□□□□□ -0.2
VAPA-209ENST00000585042 ENDOUP21128 410 aaKnown RBP13.8□□□□□ -0.2
VAPA-209ENST00000585042 STX2P32856 288 aa13.8□□□□□ -0.2
VAPA-209ENST00000585042 PIK3CGP48736 1102 aa13.8□□□□□ -0.2
VAPA-209ENST00000585042 ALDH18A1P54886 795 aaKnown RBP13.8□□□□□ -0.2
VAPA-209ENST00000585042 ZNF267Q14586 743 aaPredicted RBP13.8□□□□□ -0.2
VAPA-209ENST00000585042 KBTBD12Q3ZCT8 623 aa13.8□□□□□ -0.2
VAPA-209ENST00000585042 TMEM198Q66K66 360 aa13.8□□□□□ -0.2
VAPA-209ENST00000585042 C18orf63Q68DL7 685 aa13.8□□□□□ -0.2
VAPA-209ENST00000585042 C8orf74Q6P047 294 aa13.8□□□□□ -0.2
VAPA-209ENST00000585042 DGAT2L6Q6ZPD8 337 aa13.8□□□□□ -0.2
VAPA-209ENST00000585042 ULK2Q8IYT8 1036 aa13.8□□□□□ -0.2
VAPA-209ENST00000585042 TEX9Q8N6V9 391 aa13.8□□□□□ -0.2
VAPA-209ENST00000585042 PPM1NQ8N819 430 aa13.8□□□□□ -0.2
VAPA-209ENST00000585042 FAM13CQ8NE31 585 aa13.8□□□□□ -0.2
VAPA-209ENST00000585042 CHDHQ8NE62 594 aaPredicted RBP13.8□□□□□ -0.2
VAPA-209ENST00000585042 SREK1Q8WXA9 508 aaKnown RBP13.8□□□□□ -0.2
VAPA-209ENST00000585042 EXT2Q93063 718 aa13.8□□□□□ -0.2
VAPA-209ENST00000585042 CNPPD1Q9BV87 410 aa13.8□□□□□ -0.2
VAPA-209ENST00000585042 DPH5Q9H2P9 285 aa13.8□□□□□ -0.2
VAPA-209ENST00000585042 DNAJB12Q9NXW2 375 aaKnown RBP13.8□□□□□ -0.2
VAPA-209ENST00000585042 ALKBH4Q9NXW9 302 aa13.8□□□□□ -0.2
VAPA-209ENST00000585042 GRHL1Q9NZI5 618 aa13.8□□□□□ -0.2
VAPA-209ENST00000585042 SPRR3Q9UBC9 169 aa13.8□□□□□ -0.2
VAPA-209ENST00000585042 ZNF629Q9UEG4 869 aaPredicted RBP13.8□□□□□ -0.2
VAPA-209ENST00000585042 CNOT11Q9UKZ1 510 aaKnown RBP13.8□□□□□ -0.2
VAPA-209ENST00000585042 TNPO3Q9Y5L0 923 aaKnown RBP13.8□□□□□ -0.2
VAPA-209ENST00000585042 ITPR3Q14573 2671 aa13.8□□□□□ -0.2
VAPA-209ENST00000585042 NF1P21359 2839 aa13.8□□□□□ -0.2
VAPA-209ENST00000585042 A0A0A6YYD5 115 aa13.79□□□□□ -0.2
VAPA-209ENST00000585042 LRRC3CA6NJW4 275 aa13.79□□□□□ -0.2
VAPA-209ENST00000585042 HRKO00198 91 aa13.79□□□□□ -0.2
VAPA-209ENST00000585042 OR10H2O60403 315 aa13.79□□□□□ -0.2
VAPA-209ENST00000585042 CDH16O75309 829 aa13.79□□□□□ -0.2
VAPA-209ENST00000585042 SH3BGRLO75368 114 aa13.79□□□□□ -0.2
VAPA-209ENST00000585042 TRIM3O75382 744 aaPredicted RBP13.79□□□□□ -0.2
VAPA-209ENST00000585042 FAM58BPP0C7Q3 252 aa13.79□□□□□ -0.2
VAPA-209ENST00000585042 CEACAM8P31997 349 aaPredicted RBP13.79□□□□□ -0.2
VAPA-209ENST00000585042 BSGP35613 385 aa13.79□□□□□ -0.2
VAPA-209ENST00000585042 TIMP3P35625 211 aa13.79□□□□□ -0.2
VAPA-209ENST00000585042 KIR2DL3P43628 341 aa13.79□□□□□ -0.2
VAPA-209ENST00000585042 IST1P53990 364 aa13.79□□□□□ -0.2
VAPA-209ENST00000585042 HNRNPH2P55795 449 aaKnown RBP13.79□□□□□ -0.2
VAPA-209ENST00000585042 HERVK_113P63132 956 aa13.79□□□□□ -0.2
VAPA-209ENST00000585042 ERVK-8P63133 956 aa13.79□□□□□ -0.2
VAPA-209ENST00000585042 SETDB1Q15047 1291 aa13.79□□□□□ -0.2
VAPA-209ENST00000585042 ACAP2Q15057 778 aa13.79□□□□□ -0.2
VAPA-209ENST00000585042 EBPQ15125 230 aaKnown RBP13.79□□□□□ -0.2
VAPA-209ENST00000585042 PCBP2Q15366 365 aaKnown RBP eCLIP13.79□□□□□ -0.2
VAPA-209ENST00000585042 FBXL19-AS1Q494R0 122 aa13.79□□□□□ -0.2
VAPA-209ENST00000585042 C10orf62Q5T681 223 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms