RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 RIPOR1Q6ZS17 1223 aa12.97□□□□□ -0.33
TRAF4-215ENST00000584944 TICAM1Q8IUC6 712 aa12.97□□□□□ -0.33
TRAF4-215ENST00000584944 ST13P4Q8IZP2 240 aaPredicted RBP12.97□□□□□ -0.33
TRAF4-215ENST00000584944 SHISA5Q8N114 240 aa12.97□□□□□ -0.33
TRAF4-215ENST00000584944 GALNT16Q8N428 558 aa12.97□□□□□ -0.33
TRAF4-215ENST00000584944 ZFP28Q8NHY6 868 aa12.97□□□□□ -0.33
TRAF4-215ENST00000584944 DNAJB14Q8TBM8 379 aa12.97□□□□□ -0.33
TRAF4-215ENST00000584944 SLC25A23Q9BV35 468 aa12.97□□□□□ -0.33
TRAF4-215ENST00000584944 CNPPD1Q9BV87 410 aa12.97□□□□□ -0.33
TRAF4-215ENST00000584944 OR8D2Q9GZM6 311 aa12.97□□□□□ -0.33
TRAF4-215ENST00000584944 LHPPQ9H008 270 aa12.97□□□□□ -0.33
TRAF4-215ENST00000584944 WDR55Q9H6Y2 383 aaPredicted RBP12.97□□□□□ -0.33
TRAF4-215ENST00000584944 KCNK13Q9HB14 408 aa12.97□□□□□ -0.33
TRAF4-215ENST00000584944 TCF7L2Q9NQB0 619 aa12.97□□□□□ -0.33
TRAF4-215ENST00000584944 GPR83Q9NYM4 423 aa12.97□□□□□ -0.33
TRAF4-215ENST00000584944 C5AR2Q9P296 337 aa12.97□□□□□ -0.33
TRAF4-215ENST00000584944 ABI3Q9P2A4 366 aa12.97□□□□□ -0.33
TRAF4-215ENST00000584944 FER1L5A0AVI2 2057 aa12.97□□□□□ -0.33
TRAF4-215ENST00000584944 A0A0G2JND7 137 aa12.96□□□□□ -0.33
TRAF4-215ENST00000584944 SAGE2PA6NJ88 616 aa12.96□□□□□ -0.33
TRAF4-215ENST00000584944 A8MUI8 341 aa12.96□□□□□ -0.33
TRAF4-215ENST00000584944 UBDO15205 165 aa12.96□□□□□ -0.33
TRAF4-215ENST00000584944 EDF1O60869 148 aaKnown RBP12.96□□□□□ -0.33
TRAF4-215ENST00000584944 SERPINA7P05543 415 aa12.96□□□□□ -0.33
TRAF4-215ENST00000584944 CPMP14384 443 aa12.96□□□□□ -0.33
TRAF4-215ENST00000584944 IDO1P14902 403 aa12.96□□□□□ -0.33
TRAF4-215ENST00000584944 RAPSNQ13702 412 aa12.96□□□□□ -0.33
TRAF4-215ENST00000584944 ZNF267Q14586 743 aaPredicted RBP12.96□□□□□ -0.33
TRAF4-215ENST00000584944 KIAA0040Q15053 153 aa12.96□□□□□ -0.33
TRAF4-215ENST00000584944 PCOLCEQ15113 449 aa12.96□□□□□ -0.33
TRAF4-215ENST00000584944 PGS1Q32NB8 556 aa12.96□□□□□ -0.33
TRAF4-215ENST00000584944 CPTPQ5TA50 214 aa12.96□□□□□ -0.33
TRAF4-215ENST00000584944 AGAP7PQ5VUJ5 663 aa12.96□□□□□ -0.33
TRAF4-215ENST00000584944 CPZQ66K79 652 aa12.96□□□□□ -0.33
TRAF4-215ENST00000584944 PLAG1Q6DJT9 500 aa12.96□□□□□ -0.33
TRAF4-215ENST00000584944 JMJD6Q6NYC1 403 aaPredicted RBP12.96□□□□□ -0.33
TRAF4-215ENST00000584944 APLFQ8IW19 511 aaPredicted RBP12.96□□□□□ -0.33
TRAF4-215ENST00000584944 GALNT12Q8IXK2 581 aa12.96□□□□□ -0.33
TRAF4-215ENST00000584944 SLC5A8Q8N695 610 aa12.96□□□□□ -0.33
TRAF4-215ENST00000584944 MORN4Q8NDC4 146 aa12.96□□□□□ -0.33
TRAF4-215ENST00000584944 B3GNT7Q8NFL0 401 aa12.96□□□□□ -0.33
TRAF4-215ENST00000584944 M1APQ8TC57 530 aa12.96□□□□□ -0.33
TRAF4-215ENST00000584944 ACTRT2Q8TDY3 377 aa12.96□□□□□ -0.33
TRAF4-215ENST00000584944 TM9SF4Q92544 642 aa12.96□□□□□ -0.33
TRAF4-215ENST00000584944 ANKRD9Q96BM1 317 aaPredicted RBP12.96□□□□□ -0.33
TRAF4-215ENST00000584944 PPWD1Q96BP3 646 aaKnown RBP12.96□□□□□ -0.33
TRAF4-215ENST00000584944 MTERF3Q96E29 417 aa12.96□□□□□ -0.33
TRAF4-215ENST00000584944 THOC1Q96FV9 657 aaKnown RBP12.96□□□□□ -0.33
TRAF4-215ENST00000584944 AGAP4Q96P64 663 aa12.96□□□□□ -0.33
TRAF4-215ENST00000584944 DEFB126Q9BYW3 111 aa12.96□□□□□ -0.33
TRAF4-215ENST00000584944 DPY30Q9C005 99 aa12.96□□□□□ -0.33
TRAF4-215ENST00000584944 TRIM4Q9C037 500 aa12.96□□□□□ -0.33
TRAF4-215ENST00000584944 BRINP2Q9C0B6 783 aa12.96□□□□□ -0.33
TRAF4-215ENST00000584944 NSRP1Q9H0G5 558 aaKnown RBP12.96□□□□□ -0.33
TRAF4-215ENST00000584944 REEP4Q9H6H4 257 aa12.96□□□□□ -0.33
TRAF4-215ENST00000584944 SLC35C2Q9NQQ7 365 aa12.96□□□□□ -0.33
TRAF4-215ENST00000584944 FGFR1OP2Q9NVK5 253 aa12.96□□□□□ -0.33
TRAF4-215ENST00000584944 DCTN4Q9UJW0 460 aa12.96□□□□□ -0.33
TRAF4-215ENST00000584944 TRIM33Q9UPN9 1127 aa12.96□□□□□ -0.33
TRAF4-215ENST00000584944 UBR5O95071 2799 aaPredicted RBP12.95□□□□□ -0.34
TRAF4-215ENST00000584944 SDHDO14521 159 aa12.95□□□□□ -0.34
TRAF4-215ENST00000584944 PDPK1O15530 556 aa12.95□□□□□ -0.34
TRAF4-215ENST00000584944 DNAJB5O75953 348 aa12.95□□□□□ -0.34
TRAF4-215ENST00000584944 PRR35P0CG20 571 aa12.95□□□□□ -0.34
TRAF4-215ENST00000584944 G6PDP11413 515 aa12.95□□□□□ -0.34
TRAF4-215ENST00000584944 TACR1P25103 407 aa12.95□□□□□ -0.34
TRAF4-215ENST00000584944 GPC1P35052 558 aa12.95□□□□□ -0.34
TRAF4-215ENST00000584944 CLCN2P51788 898 aa12.95□□□□□ -0.34
TRAF4-215ENST00000584944 NCBP2P52298 156 aaKnown RBP eCLIP12.95□□□□□ -0.34
TRAF4-215ENST00000584944 CLNS1AP54105 237 aaKnown RBP12.95□□□□□ -0.34
TRAF4-215ENST00000584944 SLC26A5P58743 744 aa12.95□□□□□ -0.34
TRAF4-215ENST00000584944 PTGR1Q14914 329 aa12.95□□□□□ -0.34
TRAF4-215ENST00000584944 HLA-DQA1Q5Y7H0 255 aa12.95□□□□□ -0.34
TRAF4-215ENST00000584944 FAM71E1Q6IPT2 247 aa12.95□□□□□ -0.34
TRAF4-215ENST00000584944 MMP21Q8N119 569 aa12.95□□□□□ -0.34
TRAF4-215ENST00000584944 VPS37AQ8NEZ2 397 aa12.95□□□□□ -0.34
TRAF4-215ENST00000584944 C11orf24Q96F05 449 aaPredicted RBP12.95□□□□□ -0.34
TRAF4-215ENST00000584944 ZBED6CLQ96FA7 236 aaPredicted RBP12.95□□□□□ -0.34
TRAF4-215ENST00000584944 VMP1Q96GC9 406 aa12.95□□□□□ -0.34
TRAF4-215ENST00000584944 EGLN2Q96KS0 407 aa12.95□□□□□ -0.34
TRAF4-215ENST00000584944 SLC25A18Q9H1K4 315 aa12.95□□□□□ -0.34
TRAF4-215ENST00000584944 ASIC5Q9NY37 505 aa12.95□□□□□ -0.34
TRAF4-215ENST00000584944 HEY2Q9UBP5 337 aa12.95□□□□□ -0.34
TRAF4-215ENST00000584944 PTPN13Q12923 2485 aa12.95□□□□□ -0.34
TRAF4-215ENST00000584944 TRBV11-1A0A0K0K1C0 115 aa12.94□□□□□ -0.34
TRAF4-215ENST00000584944 WASHC1A8K0Z3 465 aa12.94□□□□□ -0.34
TRAF4-215ENST00000584944 SCAMP2O15127 329 aaKnown RBP12.94□□□□□ -0.34
TRAF4-215ENST00000584944 MANFP55145 182 aaKnown RBP12.94□□□□□ -0.34
TRAF4-215ENST00000584944 KCNAB2Q13303 367 aa12.94□□□□□ -0.34
TRAF4-215ENST00000584944 MYBPC3Q14896 1274 aa12.94□□□□□ -0.34
TRAF4-215ENST00000584944 SLC9B1Q4ZJI4 515 aa12.94□□□□□ -0.34
TRAF4-215ENST00000584944 ABHD17BQ5VST6 288 aa12.94□□□□□ -0.34
TRAF4-215ENST00000584944 OGFOD2Q6N063 350 aa12.94□□□□□ -0.34
TRAF4-215ENST00000584944 EPGNQ6UW88 154 aa12.94□□□□□ -0.34
TRAF4-215ENST00000584944 HSDL2Q6YN16 418 aa12.94□□□□□ -0.34
TRAF4-215ENST00000584944 LARP4Q71RC2 724 aaKnown RBP eCLIP12.94□□□□□ -0.34
TRAF4-215ENST00000584944 SLC29A4Q7RTT9 530 aa12.94□□□□□ -0.34
TRAF4-215ENST00000584944 CCDC116Q8IYX3 515 aa12.94□□□□□ -0.34
TRAF4-215ENST00000584944 VWA5B2Q8N398 1253 aa12.94□□□□□ -0.34
TRAF4-215ENST00000584944 NATD1Q8N6N6 113 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms