RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 EVCP57679 992 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 B3GALT5-AS1P59052 145 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 YWHAHQ04917 246 aaPredicted RBP2.29□□□□□ -2.04
VAPA-208ENST00000584796 PNRC1Q12796 327 aaPredicted RBP2.29□□□□□ -2.04
VAPA-208ENST00000584796 PCLAFQ15004 111 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 ALX1Q15699 326 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 C15orf59Q2T9L4 293 aaPredicted RBP2.29□□□□□ -2.04
VAPA-208ENST00000584796 C2orf76Q3KRA6 126 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 GKAP1Q5VSY0 366 aaPredicted RBP2.29□□□□□ -2.04
VAPA-208ENST00000584796 TMEM198Q66K66 360 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 ABRAXAS1Q6UWZ7 409 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 BTN2A1Q7KYR7 527 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 GLRX5Q86SX6 157 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 ZNF619Q8N2I2 560 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 C10orf53Q8N6V4 93 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 C17orf47Q8NEP4 570 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 SETD6Q8TBK2 473 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 SPATA18Q8TC71 538 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 GRK7Q8WTQ7 553 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 DNASE1L2Q92874 299 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 EXOC4Q96A65 974 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 AZIN2Q96A70 460 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 ELSPBP1Q96BH3 223 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 SAT2Q96F10 170 aaPredicted RBP2.29□□□□□ -2.04
VAPA-208ENST00000584796 CPB2Q96IY4 423 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 ABHD1Q96SE0 405 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 THUMPD3Q9BV44 507 aaKnown RBP2.29□□□□□ -2.04
VAPA-208ENST00000584796 KLHL4Q9C0H6 718 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 CLMPQ9H6B4 373 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 HPS4Q9NQG7 708 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 NPAP1Q9NZP6 1156 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 WRAP73Q9P2S5 460 aaPredicted RBP2.29□□□□□ -2.04
VAPA-208ENST00000584796 PIN4Q9Y237 131 aaKnown RBP2.29□□□□□ -2.04
VAPA-208ENST00000584796 NIPBLQ6KC79 2804 aaeCLIP2.29□□□□□ -2.04
VAPA-208ENST00000584796 PCNX1Q96RV3 2341 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 ZNF469Q96JG9 3925 aaPredicted RBP2.28□□□□□ -2.04
VAPA-208ENST00000584796 RP1L1Q8IWN7 2480 aaPredicted RBP2.28□□□□□ -2.04
VAPA-208ENST00000584796 CCDC168Q8NDH2 2452 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 COL1A2P08123 1366 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 NFASCO94856 1347 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 A0A087WV48 116 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 A0A087WWV3 80 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 A0A0U1RQK1 487 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 ZNF320A2RRD8 509 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 MYBPHLA2RUH7 354 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 ARL5CA6NH57 179 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 H0YAE9 185 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 PTGESO14684 152 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 IPO8O15397 1037 aaKnown RBP2.28□□□□□ -2.04
VAPA-208ENST00000584796 NDUFS4O43181 175 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 IDH3BO43837 385 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 FYNP06241 537 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 CCDC192P0DO97 292 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 FDPSP14324 419 aaKnown RBP2.28□□□□□ -2.04
VAPA-208ENST00000584796 CYP2A7P20853 494 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 CPT2P23786 658 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 PTAFRP25105 342 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 OR1D2P34982 312 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 MMP12P39900 470 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 OPRL1P41146 370 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 BRCC3P46736 316 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 DHPSP49366 369 aaPredicted RBP2.28□□□□□ -2.04
VAPA-208ENST00000584796 MFAP4P55083 255 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 PAX8Q06710 450 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 SCN1BQ07699 218 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 CALCOCO2Q13137 446 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 CAMK2DQ13557 499 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 SNTB1Q13884 538 aaKnown RBP2.28□□□□□ -2.04
VAPA-208ENST00000584796 FASTKD3Q14CZ7 662 aaKnown RBP2.28□□□□□ -2.04
VAPA-208ENST00000584796 NONOQ15233 471 aaKnown RBP eCLIP2.28□□□□□ -2.04
VAPA-208ENST00000584796 PSMD5Q16401 504 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 SMU1Q2TAY7 513 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 KRBOX4Q5JUW0 171 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 PPM1LQ5SGD2 360 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 GRTP1Q5TC63 336 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 CST9LP1Q5W188 147 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 TWF2Q6IBS0 349 aaKnown RBP2.28□□□□□ -2.04
VAPA-208ENST00000584796 ZSCAN25Q6NSZ9 544 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 SHQ1Q6PI26 577 aaKnown RBP2.28□□□□□ -2.04
VAPA-208ENST00000584796 TRAT1Q6PIZ9 186 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 CFAP77Q6ZQR2 320 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 PLPPR4Q7Z2D5 763 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 PIWIL3Q7Z3Z3 882 aaKnown RBP2.28□□□□□ -2.04
VAPA-208ENST00000584796 PTAR1Q7Z6K3 402 aaPredicted RBP2.28□□□□□ -2.04
VAPA-208ENST00000584796 HOGA1Q86XE5 327 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 CEP57Q86XR8 500 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 KIF18AQ8NI77 898 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 ZNF519Q8TB69 540 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 ZPLD1Q8TCW7 415 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 PTP4A1Q93096 173 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 C1orf74Q96LT6 269 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 FER1L6-AS2Q96M78 137 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 PRICKLE1Q96MT3 831 aaPredicted RBP2.28□□□□□ -2.04
VAPA-208ENST00000584796 TRAF4Q9BUZ4 470 aaPredicted RBP2.28□□□□□ -2.04
VAPA-208ENST00000584796 ACAT2Q9BWD1 397 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 GTPBP2Q9BX10 602 aaKnown RBP2.28□□□□□ -2.04
VAPA-208ENST00000584796 NACAP1Q9BZK3 213 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 LRRCC1Q9C099 1032 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 OSGEPL1Q9H4B0 414 aa2.28□□□□□ -2.04
VAPA-208ENST00000584796 OPA3Q9H6K4 179 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms