RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 OR6C76A6NM76 312 aa25.21■■□□□ 1.63
SMARCD2-210ENST00000584400 SPAG7O75391 227 aa25.21■■□□□ 1.63
SMARCD2-210ENST00000584400 CPMP14384 443 aa25.21■■□□□ 1.63
SMARCD2-210ENST00000584400 DRD2P14416 443 aa25.21■■□□□ 1.63
SMARCD2-210ENST00000584400 CHN1P15882 459 aa25.21■■□□□ 1.63
SMARCD2-210ENST00000584400 PORP16435 677 aaPredicted RBP25.21■■□□□ 1.63
SMARCD2-210ENST00000584400 CSNK2A2P19784 350 aaPredicted RBP25.21■■□□□ 1.63
SMARCD2-210ENST00000584400 FOXA1P55317 472 aa25.21■■□□□ 1.63
SMARCD2-210ENST00000584400 HEPACAMQ14CZ8 416 aa25.21■■□□□ 1.63
SMARCD2-210ENST00000584400 GALNT18Q6P9A2 607 aa25.21■■□□□ 1.63
SMARCD2-210ENST00000584400 TRIM46Q7Z4K8 759 aa25.21■■□□□ 1.63
SMARCD2-210ENST00000584400 POGLUT1Q8NBL1 392 aa25.21■■□□□ 1.63
SMARCD2-210ENST00000584400 SLC22A8Q8TCC7 542 aa25.21■■□□□ 1.63
SMARCD2-210ENST00000584400 RASL10BQ96S79 203 aa25.21■■□□□ 1.63
SMARCD2-210ENST00000584400 GATA5Q9BWX5 397 aaPredicted RBP25.21■■□□□ 1.63
SMARCD2-210ENST00000584400 EML4Q9HC35 981 aaKnown RBP25.21■■□□□ 1.63
SMARCD2-210ENST00000584400 SIRT5Q9NXA8 310 aa25.21■■□□□ 1.63
SMARCD2-210ENST00000584400 ZNF780BQ9Y6R6 833 aa25.21■■□□□ 1.63
SMARCD2-210ENST00000584400 UBR5O95071 2799 aaPredicted RBP25.2■■□□□ 1.62
SMARCD2-210ENST00000584400 CHEK2O96017 543 aa25.2■■□□□ 1.62
SMARCD2-210ENST00000584400 TIA1P31483 386 aaKnown RBP eCLIP25.2■■□□□ 1.62
SMARCD2-210ENST00000584400 ALDH9A1P49189 494 aa25.2■■□□□ 1.62
SMARCD2-210ENST00000584400 TDGF1P3P51864 188 aa25.2■■□□□ 1.62
SMARCD2-210ENST00000584400 ALDH6A1Q02252 535 aaKnown RBP25.2■■□□□ 1.62
SMARCD2-210ENST00000584400 ZNF844Q08AG5 666 aa25.2■■□□□ 1.62
SMARCD2-210ENST00000584400 DGAT2L6Q6ZPD8 337 aa25.2■■□□□ 1.62
SMARCD2-210ENST00000584400 PNPLA5Q7Z6Z6 429 aaPredicted RBP25.2■■□□□ 1.62
SMARCD2-210ENST00000584400 ZNF227Q86WZ6 799 aa25.2■■□□□ 1.62
SMARCD2-210ENST00000584400 SAMD14Q8IZD0 417 aaPredicted RBP25.2■■□□□ 1.62
SMARCD2-210ENST00000584400 UCN3Q969E3 161 aa25.2■■□□□ 1.62
SMARCD2-210ENST00000584400 APIPQ96GX9 242 aa25.2■■□□□ 1.62
SMARCD2-210ENST00000584400 LIN28AQ9H9Z2 209 aaKnown RBP25.2■■□□□ 1.62
SMARCD2-210ENST00000584400 CXorf21Q9HAI6 301 aa25.2■■□□□ 1.62
SMARCD2-210ENST00000584400 SEC14L3Q9UDX4 400 aa25.2■■□□□ 1.62
SMARCD2-210ENST00000584400 NPHS1O60500 1241 aa25.19■■□□□ 1.62
SMARCD2-210ENST00000584400 ERAL1O75616 437 aaKnown RBP25.19■■□□□ 1.62
SMARCD2-210ENST00000584400 NT5EP21589 574 aa25.19■■□□□ 1.62
SMARCD2-210ENST00000584400 ALDH3A1P30838 453 aa25.19■■□□□ 1.62
SMARCD2-210ENST00000584400 PMP22Q01453 160 aa25.19■■□□□ 1.62
SMARCD2-210ENST00000584400 BTKQ06187 659 aa25.19■■□□□ 1.62
SMARCD2-210ENST00000584400 RBPJQ06330 500 aa25.19■■□□□ 1.62
SMARCD2-210ENST00000584400 KRTCAP3Q53RY4 240 aa25.19■■□□□ 1.62
SMARCD2-210ENST00000584400 SCIMPQ6UWF3 145 aa25.19■■□□□ 1.62
SMARCD2-210ENST00000584400 GFRALQ6UXV0 394 aa25.19■■□□□ 1.62
SMARCD2-210ENST00000584400 SLC15A4Q8N697 577 aa25.19■■□□□ 1.62
SMARCD2-210ENST00000584400 KLHL29Q96CT2 875 aa25.19■■□□□ 1.62
SMARCD2-210ENST00000584400 METTL2AQ96IZ6 378 aaKnown RBP25.19■■□□□ 1.62
SMARCD2-210ENST00000584400 SGCZQ96LD1 299 aa25.19■■□□□ 1.62
SMARCD2-210ENST00000584400 FRMD6Q96NE9 622 aa25.19■■□□□ 1.62
SMARCD2-210ENST00000584400 SHCBP1LQ9BZQ2 653 aa25.19■■□□□ 1.62
SMARCD2-210ENST00000584400 SLC17A7Q9P2U7 560 aa25.19■■□□□ 1.62
SMARCD2-210ENST00000584400 CES1P1Q9UKY3 287 aa25.19■■□□□ 1.62
SMARCD2-210ENST00000584400 SLC5A6Q9Y289 635 aa25.19■■□□□ 1.62
SMARCD2-210ENST00000584400 SPENQ96T58 3664 aaKnown RBP25.18■■□□□ 1.62
SMARCD2-210ENST00000584400 SHANK1Q9Y566 2161 aa25.18■■□□□ 1.62
SMARCD2-210ENST00000584400 ERLIN1O75477 346 aa25.18■■□□□ 1.62
SMARCD2-210ENST00000584400 RSL1D1O76021 490 aaKnown RBP25.18■■□□□ 1.62
SMARCD2-210ENST00000584400 SERPINB5P36952 375 aa25.18■■□□□ 1.62
SMARCD2-210ENST00000584400 SRSF1Q07955 248 aaKnown RBP eCLIP25.18■■□□□ 1.62
SMARCD2-210ENST00000584400 PIGGQ5H8A4 983 aa25.18■■□□□ 1.62
SMARCD2-210ENST00000584400 IL20RBQ6UXL0 311 aa25.18■■□□□ 1.62
SMARCD2-210ENST00000584400 C16orf47Q6ZP98 133 aaPredicted RBP25.18■■□□□ 1.62
SMARCD2-210ENST00000584400 C9orf40Q8IXQ3 194 aa25.18■■□□□ 1.62
SMARCD2-210ENST00000584400 DND1Q8IYX4 353 aaKnown RBP25.18■■□□□ 1.62
SMARCD2-210ENST00000584400 FAM76AQ8TAV0 307 aa25.18■■□□□ 1.62
SMARCD2-210ENST00000584400 DLGAP4Q9Y2H0 992 aa25.18■■□□□ 1.62
SMARCD2-210ENST00000584400 WBP11Q9Y2W2 641 aaKnown RBP25.18■■□□□ 1.62
SMARCD2-210ENST00000584400 SLC28A1O00337 649 aa25.17■■□□□ 1.62
SMARCD2-210ENST00000584400 AZIN1O14977 448 aa25.17■■□□□ 1.62
SMARCD2-210ENST00000584400 ANXA4P09525 319 aaPredicted RBP25.17■■□□□ 1.62
SMARCD2-210ENST00000584400 SERPINB3P29508 390 aa25.17■■□□□ 1.62
SMARCD2-210ENST00000584400 SOX3P41225 446 aa25.17■■□□□ 1.62
SMARCD2-210ENST00000584400 SLC37A1P57057 533 aa25.17■■□□□ 1.62
SMARCD2-210ENST00000584400 ZNF800Q2TB10 664 aaPredicted RBP eCLIP25.17■■□□□ 1.62
SMARCD2-210ENST00000584400 FAM219BQ5XKK7 198 aa25.17■■□□□ 1.62
SMARCD2-210ENST00000584400 HLA-DQA1Q5Y7H0 255 aa25.17■■□□□ 1.62
SMARCD2-210ENST00000584400 RTL4Q6ZR62 310 aa25.17■■□□□ 1.62
SMARCD2-210ENST00000584400 GOLM1Q8NBJ4 401 aa25.17■■□□□ 1.62
SMARCD2-210ENST00000584400 PSD4Q8NDX1 1056 aa25.17■■□□□ 1.62
SMARCD2-210ENST00000584400 OR7G1Q8NGA0 311 aa25.17■■□□□ 1.62
SMARCD2-210ENST00000584400 SSC4DQ8WTU2 575 aa25.17■■□□□ 1.62
SMARCD2-210ENST00000584400 GIMAP4Q9NUV9 329 aa25.17■■□□□ 1.62
SMARCD2-210ENST00000584400 UTS2RQ9UKP6 389 aa25.17■■□□□ 1.62
SMARCD2-210ENST00000584400 CFL2Q9Y281 166 aa25.17■■□□□ 1.62
SMARCD2-210ENST00000584400 TENM4Q6N022 2769 aa25.17■■□□□ 1.62
SMARCD2-210ENST00000584400 HRKO00198 91 aa25.16■■□□□ 1.62
SMARCD2-210ENST00000584400 CTIFO43310 598 aaKnown RBP25.16■■□□□ 1.62
SMARCD2-210ENST00000584400 RGS14O43566 566 aa25.16■■□□□ 1.62
SMARCD2-210ENST00000584400 OR6B1O95007 311 aa25.16■■□□□ 1.62
SMARCD2-210ENST00000584400 UNC5CO95185 931 aa25.16■■□□□ 1.62
SMARCD2-210ENST00000584400 ATP1B1P05026 303 aa25.16■■□□□ 1.62
SMARCD2-210ENST00000584400 IL3P08700 152 aa25.16■■□□□ 1.62
SMARCD2-210ENST00000584400 MYZAPP0CAP1 466 aa25.16■■□□□ 1.62
SMARCD2-210ENST00000584400 ZNF24P17028 368 aa25.16■■□□□ 1.62
SMARCD2-210ENST00000584400 MST1P26927 711 aa25.16■■□□□ 1.62
SMARCD2-210ENST00000584400 RAE1P78406 368 aaKnown RBP25.16■■□□□ 1.62
SMARCD2-210ENST00000584400 FUT7Q11130 342 aa25.16■■□□□ 1.62
SMARCD2-210ENST00000584400 CEP85LQ5SZL2 805 aa25.16■■□□□ 1.62
SMARCD2-210ENST00000584400 RNF165Q6ZSG1 346 aa25.16■■□□□ 1.62
SMARCD2-210ENST00000584400 CNTRLQ7Z7A1 2325 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms