RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 REXO4Q9GZR2 422 aaKnown RBP14.55□□□□□ -0.08
SKA2-209ENST00000583976 LIN28AQ9H9Z2 209 aaKnown RBP14.55□□□□□ -0.08
SKA2-209ENST00000583976 NPDC1Q9NQX5 325 aaPredicted RBP14.55□□□□□ -0.08
SKA2-209ENST00000583976 FARSBQ9NSD9 589 aaKnown RBP14.55□□□□□ -0.08
SKA2-209ENST00000583976 DEPPQ9NTK1 212 aa14.55□□□□□ -0.08
SKA2-209ENST00000583976 ZNF446Q9NWS9 450 aa14.55□□□□□ -0.08
SKA2-209ENST00000583976 FBXW2Q9UKT8 454 aa14.55□□□□□ -0.08
SKA2-209ENST00000583976 KLF13Q9Y2Y9 288 aaPredicted RBP14.55□□□□□ -0.08
SKA2-209ENST00000583976 ZNF407Q9C0G0 2248 aa14.55□□□□□ -0.08
SKA2-209ENST00000583976 NF1P21359 2839 aa14.55□□□□□ -0.08
SKA2-209ENST00000583976 MED13LQ71F56 2210 aa14.54□□□□□ -0.08
SKA2-209ENST00000583976 NKX2-6A6NCS4 301 aa14.54□□□□□ -0.08
SKA2-209ENST00000583976 FCHO1O14526 889 aa14.54□□□□□ -0.08
SKA2-209ENST00000583976 PEX1O43933 1283 aa14.54□□□□□ -0.08
SKA2-209ENST00000583976 ITGA10O75578 1167 aa14.54□□□□□ -0.08
SKA2-209ENST00000583976 NEFHP12036 1026 aa14.54□□□□□ -0.08
SKA2-209ENST00000583976 HMOX2P30519 316 aa14.54□□□□□ -0.08
SKA2-209ENST00000583976 HPDP32754 393 aaPredicted RBP14.54□□□□□ -0.08
SKA2-209ENST00000583976 PTGS2P35354 604 aa14.54□□□□□ -0.08
SKA2-209ENST00000583976 PKNOX1P55347 436 aa14.54□□□□□ -0.08
SKA2-209ENST00000583976 PHEXP78562 749 aa14.54□□□□□ -0.08
SKA2-209ENST00000583976 IFT88Q13099 833 aa14.54□□□□□ -0.08
SKA2-209ENST00000583976 TESK1Q15569 626 aa14.54□□□□□ -0.08
SKA2-209ENST00000583976 GGTA1PQ4G0N0 100 aa14.54□□□□□ -0.08
SKA2-209ENST00000583976 TCHHL1Q5QJ38 904 aaPredicted RBP14.54□□□□□ -0.08
SKA2-209ENST00000583976 FRG2Q64ET8 278 aa14.54□□□□□ -0.08
SKA2-209ENST00000583976 CLNKQ7Z7G1 428 aa14.54□□□□□ -0.08
SKA2-209ENST00000583976 ARMC10Q8N2F6 343 aa14.54□□□□□ -0.08
SKA2-209ENST00000583976 OR52N2Q8NGI0 321 aa14.54□□□□□ -0.08
SKA2-209ENST00000583976 PPP1R14CQ8TAE6 165 aa14.54□□□□□ -0.08
SKA2-209ENST00000583976 FAM57AQ8TBR7 257 aa14.54□□□□□ -0.08
SKA2-209ENST00000583976 METTL6Q8TCB7 284 aa14.54□□□□□ -0.08
SKA2-209ENST00000583976 NCLNQ969V3 563 aa14.54□□□□□ -0.08
SKA2-209ENST00000583976 GAL3ST3Q96A11 431 aa14.54□□□□□ -0.08
SKA2-209ENST00000583976 CMTM7Q96FZ5 175 aa14.54□□□□□ -0.08
SKA2-209ENST00000583976 FAR2Q96K12 515 aa14.54□□□□□ -0.08
SKA2-209ENST00000583976 ATP6V1G3Q96LB4 118 aa14.54□□□□□ -0.08
SKA2-209ENST00000583976 FRG2BQ96QU4 278 aa14.54□□□□□ -0.08
SKA2-209ENST00000583976 KCNA7Q96RP8 456 aa14.54□□□□□ -0.08
SKA2-209ENST00000583976 SH3GL2Q99962 352 aa14.54□□□□□ -0.08
SKA2-209ENST00000583976 SPOCK3Q9BQ16 436 aa14.54□□□□□ -0.08
SKA2-209ENST00000583976 MS4A8Q9BY19 250 aa14.54□□□□□ -0.08
SKA2-209ENST00000583976 ENKD1Q9H0I2 346 aa14.54□□□□□ -0.08
SKA2-209ENST00000583976 ELOVL6Q9H5J4 265 aa14.54□□□□□ -0.08
SKA2-209ENST00000583976 DMRT3Q9NQL9 472 aa14.54□□□□□ -0.08
SKA2-209ENST00000583976 PNO1Q9NRX1 252 aaKnown RBP14.54□□□□□ -0.08
SKA2-209ENST00000583976 TRPS1Q9UHF7 1281 aa14.54□□□□□ -0.08
SKA2-209ENST00000583976 ADGRE2Q9UHX3 823 aa14.54□□□□□ -0.08
SKA2-209ENST00000583976 STK38LQ9Y2H1 464 aa14.54□□□□□ -0.08
SKA2-209ENST00000583976 TIMM22Q9Y584 194 aa14.54□□□□□ -0.08
SKA2-209ENST00000583976 HCFC1P51610 2035 aa14.54□□□□□ -0.08
SKA2-209ENST00000583976 SETD2Q9BYW2 2564 aaPredicted RBP14.54□□□□□ -0.08
SKA2-209ENST00000583976 INTS1Q8N201 2190 aaKnown RBP14.53□□□□□ -0.08
SKA2-209ENST00000583976 MYOCOSA0A1B0GUC4 107 aa14.53□□□□□ -0.08
SKA2-209ENST00000583976 G3V3Y1 287 aa14.53□□□□□ -0.08
SKA2-209ENST00000583976 RTCAO00442 366 aaKnown RBP14.53□□□□□ -0.08
SKA2-209ENST00000583976 CRCPO75575 148 aa14.53□□□□□ -0.08
SKA2-209ENST00000583976 PDE9AO76083 593 aa14.53□□□□□ -0.08
SKA2-209ENST00000583976 ESRRBO95718 433 aa14.53□□□□□ -0.08
SKA2-209ENST00000583976 PDYNP01213 254 aa14.53□□□□□ -0.08
SKA2-209ENST00000583976 SERPINB1P30740 379 aa14.53□□□□□ -0.08
SKA2-209ENST00000583976 PIK3CBP42338 1070 aa14.53□□□□□ -0.08
SKA2-209ENST00000583976 FOXA1P55317 472 aa14.53□□□□□ -0.08
SKA2-209ENST00000583976 NAA20P61599 178 aa14.53□□□□□ -0.08
SKA2-209ENST00000583976 RUNX2Q13950 521 aa14.53□□□□□ -0.08
SKA2-209ENST00000583976 HHATQ5VTY9 493 aa14.53□□□□□ -0.08
SKA2-209ENST00000583976 KHDRBS2Q5VWX1 349 aaKnown RBP14.53□□□□□ -0.08
SKA2-209ENST00000583976 TRIM40Q6P9F5 258 aa14.53□□□□□ -0.08
SKA2-209ENST00000583976 CHSY3Q70JA7 882 aa14.53□□□□□ -0.08
SKA2-209ENST00000583976 POGLUT1Q8NBL1 392 aa14.53□□□□□ -0.08
SKA2-209ENST00000583976 OR2L5Q8NG80 312 aa14.53□□□□□ -0.08
SKA2-209ENST00000583976 SELENOMQ8WWX9 145 aa14.53□□□□□ -0.08
SKA2-209ENST00000583976 HBEGFQ99075 208 aa14.53□□□□□ -0.08
SKA2-209ENST00000583976 TREX2Q9BQ50 279 aaPredicted RBP14.53□□□□□ -0.08
SKA2-209ENST00000583976 TNFRSF12AQ9NP84 129 aa14.53□□□□□ -0.08
SKA2-209ENST00000583976 KCMF1Q9P0J7 381 aa14.53□□□□□ -0.08
SKA2-209ENST00000583976 SNX6Q9UNH7 406 aa14.53□□□□□ -0.08
SKA2-209ENST00000583976 FIS1Q9Y3D6 152 aa14.53□□□□□ -0.08
SKA2-209ENST00000583976 LIPGQ9Y5X9 500 aa14.53□□□□□ -0.08
SKA2-209ENST00000583976 FAM166BA8MTA8 275 aa14.52□□□□□ -0.09
SKA2-209ENST00000583976 MANBAO00462 879 aa14.52□□□□□ -0.09
SKA2-209ENST00000583976 ETHE1O95571 254 aa14.52□□□□□ -0.09
SKA2-209ENST00000583976 CHRNGP07510 517 aa14.52□□□□□ -0.09
SKA2-209ENST00000583976 DHRS4L1P0CG22 281 aa14.52□□□□□ -0.09
SKA2-209ENST00000583976 IGFBP2P18065 325 aa14.52□□□□□ -0.09
SKA2-209ENST00000583976 PTX3P26022 381 aaPredicted RBP14.52□□□□□ -0.09
SKA2-209ENST00000583976 CERS1P27544 350 aa14.52□□□□□ -0.09
SKA2-209ENST00000583976 SERPINB3P29508 390 aa14.52□□□□□ -0.09
SKA2-209ENST00000583976 CLCN2P51788 898 aa14.52□□□□□ -0.09
SKA2-209ENST00000583976 RAP1GDS1P52306 607 aa14.52□□□□□ -0.09
SKA2-209ENST00000583976 CHI3L2Q15782 390 aa14.52□□□□□ -0.09
SKA2-209ENST00000583976 ADPRMQ3LIE5 342 aa14.52□□□□□ -0.09
SKA2-209ENST00000583976 DEPDC1Q5TB30 811 aa14.52□□□□□ -0.09
SKA2-209ENST00000583976 NIPAL1Q6NVV3 410 aa14.52□□□□□ -0.09
SKA2-209ENST00000583976 ABHD17CQ6PCB6 329 aa14.52□□□□□ -0.09
SKA2-209ENST00000583976 SCIMPQ6UWF3 145 aa14.52□□□□□ -0.09
SKA2-209ENST00000583976 UBE3DQ7Z6J8 389 aa14.52□□□□□ -0.09
SKA2-209ENST00000583976 CCDC71Q8IV32 467 aaPredicted RBP14.52□□□□□ -0.09
SKA2-209ENST00000583976 TMEM156Q8N614 296 aa14.52□□□□□ -0.09
SKA2-209ENST00000583976 ZFP62Q8NB50 900 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms