RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	FBXO45	P0C2W1	286 aa		13.92	□□□□□ -0.18
SREBF1-222	ENST00000583732	NR2F6	P10588	404 aa		13.92	□□□□□ -0.18
SREBF1-222	ENST00000583732	GABRA1	P14867	456 aa		13.92	□□□□□ -0.18
SREBF1-222	ENST00000583732	GDF1	P27539	372 aa		13.92	□□□□□ -0.18
SREBF1-222	ENST00000583732	CBLB	Q13191	982 aa		13.92	□□□□□ -0.18
SREBF1-222	ENST00000583732	EBP	Q15125	230 aa	Known RBP	13.92	□□□□□ -0.18
SREBF1-222	ENST00000583732	RIPPLY2	Q5TAB7	128 aa		13.92	□□□□□ -0.18
SREBF1-222	ENST00000583732	CYP20A1	Q6UW02	462 aa		13.92	□□□□□ -0.18
SREBF1-222	ENST00000583732	ULK2	Q8IYT8	1036 aa		13.92	□□□□□ -0.18
SREBF1-222	ENST00000583732	ST13P4	Q8IZP2	240 aa	Predicted RBP	13.92	□□□□□ -0.18
SREBF1-222	ENST00000583732	ZCCHC7	Q8N3Z6	543 aa	Known RBP	13.92	□□□□□ -0.18
SREBF1-222	ENST00000583732	SLC15A4	Q8N697	577 aa		13.92	□□□□□ -0.18
SREBF1-222	ENST00000583732	NEIL3	Q8TAT5	605 aa		13.92	□□□□□ -0.18
SREBF1-222	ENST00000583732	FBF1	Q8TES7	1133 aa		13.92	□□□□□ -0.18
SREBF1-222	ENST00000583732	RIT1	Q92963	219 aa		13.92	□□□□□ -0.18
SREBF1-222	ENST00000583732	UCN3	Q969E3	161 aa		13.92	□□□□□ -0.18
SREBF1-222	ENST00000583732	POLDIP3	Q9BY77	421 aa	Known RBP	13.92	□□□□□ -0.18
SREBF1-222	ENST00000583732	LIME1	Q9H400	295 aa		13.92	□□□□□ -0.18
SREBF1-222	ENST00000583732	ACTR8	Q9H981	624 aa		13.92	□□□□□ -0.18
SREBF1-222	ENST00000583732	GRPEL1	Q9HAV7	217 aa		13.92	□□□□□ -0.18
SREBF1-222	ENST00000583732	CCM2L	Q9NUG4	571 aa	Predicted RBP	13.92	□□□□□ -0.18
SREBF1-222	ENST00000583732	B4GALT7	Q9UBV7	327 aa		13.92	□□□□□ -0.18
SREBF1-222	ENST00000583732	CNOT11	Q9UKZ1	510 aa	Known RBP	13.92	□□□□□ -0.18
SREBF1-222	ENST00000583732	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	13.92	□□□□□ -0.18
SREBF1-222	ENST00000583732	EXPH5	Q8NEV8	1989 aa		13.92	□□□□□ -0.18
SREBF1-222	ENST00000583732	KIAA1549	Q9HCM3	1950 aa		13.91	□□□□□ -0.18
SREBF1-222	ENST00000583732		A0A1W2PR48	441 aa		13.91	□□□□□ -0.18
SREBF1-222	ENST00000583732		A0A1W2PS29	197 aa		13.91	□□□□□ -0.18
SREBF1-222	ENST00000583732	PROM1	O43490	865 aa		13.91	□□□□□ -0.18
SREBF1-222	ENST00000583732	TMPRSS11D	O60235	418 aa		13.91	□□□□□ -0.18
SREBF1-222	ENST00000583732	GPR75	O95800	540 aa		13.91	□□□□□ -0.18
SREBF1-222	ENST00000583732	GBA	P04062	536 aa		13.91	□□□□□ -0.18
SREBF1-222	ENST00000583732	CLPS	P04118	112 aa		13.91	□□□□□ -0.18
SREBF1-222	ENST00000583732	GFAP	P14136	432 aa		13.91	□□□□□ -0.18
SREBF1-222	ENST00000583732	BMP5	P22003	454 aa		13.91	□□□□□ -0.18
SREBF1-222	ENST00000583732	CRABP2	P29373	138 aa		13.91	□□□□□ -0.18
SREBF1-222	ENST00000583732	SERPINB3	P29508	390 aa		13.91	□□□□□ -0.18
SREBF1-222	ENST00000583732	SSTR4	P31391	388 aa		13.91	□□□□□ -0.18
SREBF1-222	ENST00000583732	KIR2DL3	P43628	341 aa		13.91	□□□□□ -0.18
SREBF1-222	ENST00000583732	PIK3CG	P48736	1102 aa		13.91	□□□□□ -0.18
SREBF1-222	ENST00000583732	PLTP	P55058	493 aa		13.91	□□□□□ -0.18
SREBF1-222	ENST00000583732	SLC37A1	P57057	533 aa		13.91	□□□□□ -0.18
SREBF1-222	ENST00000583732	PHEX	P78562	749 aa		13.91	□□□□□ -0.18
SREBF1-222	ENST00000583732	CPSF6	Q16630	551 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
SREBF1-222	ENST00000583732	PFKFB4	Q16877	469 aa		13.91	□□□□□ -0.18
SREBF1-222	ENST00000583732	SPRED3	Q2MJR0	410 aa		13.91	□□□□□ -0.18
SREBF1-222	ENST00000583732	BICRAL	Q6AI39	1079 aa		13.91	□□□□□ -0.18
SREBF1-222	ENST00000583732	SEM1	Q6ZVN7	128 aa		13.91	□□□□□ -0.18
SREBF1-222	ENST00000583732	LRRC25	Q8N386	305 aa	Predicted RBP	13.91	□□□□□ -0.18
SREBF1-222	ENST00000583732	RELL2	Q8NC24	303 aa	Predicted RBP	13.91	□□□□□ -0.18
SREBF1-222	ENST00000583732	C7orf57	Q8NEG2	295 aa		13.91	□□□□□ -0.18
SREBF1-222	ENST00000583732	DIO2	Q92813	273 aa		13.91	□□□□□ -0.18
SREBF1-222	ENST00000583732	ZNF597	Q96LX8	424 aa		13.91	□□□□□ -0.18
SREBF1-222	ENST00000583732	PELO	Q9BRX2	385 aa	Known RBP	13.91	□□□□□ -0.18
SREBF1-222	ENST00000583732	ZNF717	Q9BY31	904 aa	Predicted RBP	13.91	□□□□□ -0.18
SREBF1-222	ENST00000583732	LYAR	Q9NX58	379 aa	Known RBP	13.91	□□□□□ -0.18
SREBF1-222	ENST00000583732	CRIM1	Q9NZV1	1036 aa		13.91	□□□□□ -0.18
SREBF1-222	ENST00000583732	CNIH4	Q9P003	139 aa		13.91	□□□□□ -0.18
SREBF1-222	ENST00000583732	ADGRE2	Q9UHX3	823 aa		13.91	□□□□□ -0.18
SREBF1-222	ENST00000583732	ZFHX3	Q15911	3703 aa		13.9	□□□□□ -0.18
SREBF1-222	ENST00000583732		A0A0A6YYD5	115 aa		13.9	□□□□□ -0.18
SREBF1-222	ENST00000583732	FAM47E-STBD1	D6RA91	191 aa		13.9	□□□□□ -0.18
SREBF1-222	ENST00000583732	CTAG2	O75638	210 aa		13.9	□□□□□ -0.18
SREBF1-222	ENST00000583732	TRAPPC6A	O75865	159 aa		13.9	□□□□□ -0.18
SREBF1-222	ENST00000583732	AIFM1	O95831	613 aa		13.9	□□□□□ -0.18
SREBF1-222	ENST00000583732	GSTA2	P09210	222 aa		13.9	□□□□□ -0.18
SREBF1-222	ENST00000583732	FAM58BP	P0C7Q3	252 aa		13.9	□□□□□ -0.18
SREBF1-222	ENST00000583732	MTHFD2	P13995	350 aa		13.9	□□□□□ -0.18
SREBF1-222	ENST00000583732	CD99	P14209	185 aa		13.9	□□□□□ -0.18
SREBF1-222	ENST00000583732	STX2	P32856	288 aa		13.9	□□□□□ -0.18
SREBF1-222	ENST00000583732	ARL1	P40616	181 aa	Predicted RBP	13.9	□□□□□ -0.18
SREBF1-222	ENST00000583732	PIK3CB	P42338	1070 aa		13.9	□□□□□ -0.18
SREBF1-222	ENST00000583732	FBXW4	P57775	412 aa		13.9	□□□□□ -0.18
SREBF1-222	ENST00000583732	TBL3	Q12788	808 aa	Known RBP	13.9	□□□□□ -0.18
SREBF1-222	ENST00000583732	DUSP8	Q13202	625 aa		13.9	□□□□□ -0.18
SREBF1-222	ENST00000583732	BIK	Q13323	160 aa		13.9	□□□□□ -0.18
SREBF1-222	ENST00000583732	SETDB1	Q15047	1291 aa		13.9	□□□□□ -0.18
SREBF1-222	ENST00000583732	CEBPE	Q15744	281 aa		13.9	□□□□□ -0.18
SREBF1-222	ENST00000583732	NTRK2	Q16620	822 aa		13.9	□□□□□ -0.18
SREBF1-222	ENST00000583732	TMEM198	Q66K66	360 aa		13.9	□□□□□ -0.18
SREBF1-222	ENST00000583732	DND1	Q8IYX4	353 aa	Known RBP	13.9	□□□□□ -0.18
SREBF1-222	ENST00000583732	PRR22	Q8IZ63	422 aa		13.9	□□□□□ -0.18
SREBF1-222	ENST00000583732	CENPL	Q8N0S6	344 aa	Predicted RBP	13.9	□□□□□ -0.18
SREBF1-222	ENST00000583732	TAGAP	Q8N103	731 aa		13.9	□□□□□ -0.18
SREBF1-222	ENST00000583732	NAXE	Q8NCW5	288 aa		13.9	□□□□□ -0.18
SREBF1-222	ENST00000583732	TNIP2	Q8NFZ5	429 aa		13.9	□□□□□ -0.18
SREBF1-222	ENST00000583732	CLEC4M	Q9H2X3	399 aa	Predicted RBP	13.9	□□□□□ -0.18
SREBF1-222	ENST00000583732	WDR41	Q9HAD4	459 aa		13.9	□□□□□ -0.18
SREBF1-222	ENST00000583732	ZNF358	Q9NW07	568 aa		13.9	□□□□□ -0.18
SREBF1-222	ENST00000583732	CPSF2	Q9P2I0	782 aa	Known RBP	13.9	□□□□□ -0.18
SREBF1-222	ENST00000583732	RNF14	Q9UBS8	474 aa		13.9	□□□□□ -0.18
SREBF1-222	ENST00000583732	PYCARD	Q9ULZ3	195 aa		13.9	□□□□□ -0.18
SREBF1-222	ENST00000583732	ACOT9	Q9Y305	439 aa		13.9	□□□□□ -0.18
SREBF1-222	ENST00000583732	ASB4	Q9Y574	426 aa		13.9	□□□□□ -0.18
SREBF1-222	ENST00000583732	PCDHGA11	Q9Y5H2	935 aa		13.9	□□□□□ -0.18
SREBF1-222	ENST00000583732	C2orf92	A0A1B0GVN3	265 aa		13.89	□□□□□ -0.19
SREBF1-222	ENST00000583732	HSPB2	A8KAH6	182 aa		13.89	□□□□□ -0.19
SREBF1-222	ENST00000583732	SYCE1L	A8MT33	242 aa		13.89	□□□□□ -0.19
SREBF1-222	ENST00000583732	PTX3	P26022	381 aa	Predicted RBP	13.89	□□□□□ -0.19
SREBF1-222	ENST00000583732	BSG	P35613	385 aa		13.89	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms