RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 ACVR2AP27037 513 aa12.96□□□□□ -0.33
SRSF1-205ENST00000582730 CD6P30203 668 aa12.96□□□□□ -0.33
SRSF1-205ENST00000582730 TGFBR1P36897 503 aa12.96□□□□□ -0.33
SRSF1-205ENST00000582730 BCL6P41182 706 aa12.96□□□□□ -0.33
SRSF1-205ENST00000582730 CCT3P49368 545 aaKnown RBP12.96□□□□□ -0.33
SRSF1-205ENST00000582730 DMPKQ09013 629 aa12.96□□□□□ -0.33
SRSF1-205ENST00000582730 MICAQ29983 383 aa12.96□□□□□ -0.33
SRSF1-205ENST00000582730 DEF8Q6ZN54 512 aa12.96□□□□□ -0.33
SRSF1-205ENST00000582730 OLIG3Q7RTU3 272 aa12.96□□□□□ -0.33
SRSF1-205ENST00000582730 UBE3DQ7Z6J8 389 aa12.96□□□□□ -0.33
SRSF1-205ENST00000582730 NLGN4XQ8N0W4 816 aa12.96□□□□□ -0.33
SRSF1-205ENST00000582730 AQP11Q8NBQ7 271 aa12.96□□□□□ -0.33
SRSF1-205ENST00000582730 PROX1Q92786 737 aa12.96□□□□□ -0.33
SRSF1-205ENST00000582730 YIPF6Q96EC8 236 aa12.96□□□□□ -0.33
SRSF1-205ENST00000582730 NEURL3Q96EH8 262 aa12.96□□□□□ -0.33
SRSF1-205ENST00000582730 HRASLS5Q96KN8 279 aa12.96□□□□□ -0.33
SRSF1-205ENST00000582730 BCL7BQ9BQE9 202 aa12.96□□□□□ -0.33
SRSF1-205ENST00000582730 SLIRPQ9GZT3 109 aaKnown RBP12.96□□□□□ -0.33
SRSF1-205ENST00000582730 TP63Q9H3D4 680 aaPredicted RBP12.96□□□□□ -0.33
SRSF1-205ENST00000582730 DSN1Q9H410 356 aa12.96□□□□□ -0.33
SRSF1-205ENST00000582730 FBXW2Q9UKT8 454 aa12.96□□□□□ -0.33
SRSF1-205ENST00000582730 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.96□□□□□ -0.33
SRSF1-205ENST00000582730 ICKQ9UPZ9 632 aa12.96□□□□□ -0.33
SRSF1-205ENST00000582730 AP1M2Q9Y6Q5 423 aa12.96□□□□□ -0.33
SRSF1-205ENST00000582730 MYO10Q9HD67 2058 aa12.96□□□□□ -0.33
SRSF1-205ENST00000582730 SNPHO15079 494 aa12.96□□□□□ -0.34
SRSF1-205ENST00000582730 CCNB2O95067 398 aa12.96□□□□□ -0.34
SRSF1-205ENST00000582730 HOXB2P14652 356 aa12.96□□□□□ -0.34
SRSF1-205ENST00000582730 RAB8AP61006 207 aa12.96□□□□□ -0.34
SRSF1-205ENST00000582730 TMEM196Q5HYL7 178 aa12.96□□□□□ -0.34
SRSF1-205ENST00000582730 ANKRD54Q6NXT1 300 aa12.96□□□□□ -0.34
SRSF1-205ENST00000582730 SVOPQ8N4V2 548 aa12.96□□□□□ -0.34
SRSF1-205ENST00000582730 COL21A1Q96P44 957 aa12.96□□□□□ -0.34
SRSF1-205ENST00000582730 BBS4Q96RK4 519 aa12.96□□□□□ -0.34
SRSF1-205ENST00000582730 BTBD1Q9H0C5 482 aa12.96□□□□□ -0.34
SRSF1-205ENST00000582730 SP140LQ9H930 580 aa12.96□□□□□ -0.34
SRSF1-205ENST00000582730 ZCCHC3Q9NUD5 404 aaKnown RBP12.96□□□□□ -0.34
SRSF1-205ENST00000582730 SPHK1Q9NYA1 384 aa12.96□□□□□ -0.34
SRSF1-205ENST00000582730 POFUT2Q9Y2G5 429 aa12.96□□□□□ -0.34
SRSF1-205ENST00000582730 PCDHGB1Q9Y5G3 927 aa12.96□□□□□ -0.34
SRSF1-205ENST00000582730 ENPP4Q9Y6X5 453 aa12.96□□□□□ -0.34
SRSF1-205ENST00000582730 GPR89AB7ZAQ6 455 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 HAT1O14929 419 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 LCKP06239 509 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 GPR89BP0CG08 455 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 C8orf89P0DMQ9 161 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 OR12D1P0DN82 309 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 JUNDP17535 347 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 SEPHS1P49903 392 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 ST13P50502 369 aaKnown RBP12.95□□□□□ -0.34
SRSF1-205ENST00000582730 NCBP2P52298 156 aaKnown RBP eCLIP12.95□□□□□ -0.345e-25■■□□□ 11.9
SRSF1-205ENST00000582730 ADPRHP54922 357 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 PCBP3P57721 371 aaKnown RBP12.95□□□□□ -0.34
SRSF1-205ENST00000582730 CXCR4P61073 352 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 PPP2CBP62714 309 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 PPP2CAP67775 309 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 LRRC32Q14392 662 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 SAXO2Q658L1 398 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 ZNF793Q6ZN11 406 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 VASH1Q7L8A9 365 aaPredicted RBP12.95□□□□□ -0.34
SRSF1-205ENST00000582730 LYSMD2Q8IV50 215 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 FBXL6Q8N531 539 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 APH1BQ8WW43 257 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 RPL3LQ92901 407 aaKnown RBP12.95□□□□□ -0.34
SRSF1-205ENST00000582730 ZNF486Q96H40 463 aaPredicted RBP12.95□□□□□ -0.34
SRSF1-205ENST00000582730 PITX2Q99697 317 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 TIMM29Q9BSF4 260 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 COPS4Q9BT78 406 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 APOOQ9BUR5 198 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 C1QTNF7Q9BXJ2 289 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 C1QTNF2Q9BXJ5 285 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 GABARAPL3Q9BY60 117 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 EPS8L2Q9H6S3 715 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 FGF22Q9HCT0 170 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 CCNB1IP1Q9NPC3 277 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 THSD1Q9NS62 852 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 DUSP12Q9UNI6 340 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 ANHXE9PGG2 379 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 DPM1O60762 260 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 KCNK2O95069 426 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 DDX5P17844 614 aaKnown RBP12.95□□□□□ -0.34
SRSF1-205ENST00000582730 NTSR1P30989 418 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 KIR2DL1P43626 348 aaPredicted RBP12.95□□□□□ -0.34
SRSF1-205ENST00000582730 XCR1P46094 333 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 HYAL1Q12794 435 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 OR4C15Q8NGM1 316 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 ELSPBP1Q96BH3 223 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 PDXPQ96GD0 296 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 ACER3Q9NUN7 267 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 SEC14L3Q9UDX4 400 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 DENND4AQ7Z401 1863 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 ANKRD34BA5PLL1 514 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 LRIT2A6NDA9 550 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 ASNA1O43681 348 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 B4GALT2O60909 372 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 UPK1BO75841 260 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 DLGAP3O95886 979 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 AK4P27144 223 aaPredicted RBP12.95□□□□□ -0.34
SRSF1-205ENST00000582730 PKLRP30613 574 aa12.95□□□□□ -0.34
SRSF1-205ENST00000582730 GGT2P36268 569 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms