RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 DMWDQ09019 674 aa21.4■■□□□ 1.02
CCDC47-204ENST00000582252 EIF2B5Q13144 721 aaKnown RBP21.4■■□□□ 1.02
CCDC47-204ENST00000582252 ZBED5Q49AG3 693 aa21.4■■□□□ 1.02
CCDC47-204ENST00000582252 B3GNT6Q6ZMB0 384 aa21.4■■□□□ 1.02
CCDC47-204ENST00000582252 SAMD14Q8IZD0 417 aaPredicted RBP21.4■■□□□ 1.02
CCDC47-204ENST00000582252 TTC29Q8NA56 475 aaPredicted RBP21.4■■□□□ 1.02
CCDC47-204ENST00000582252 CHDHQ8NE62 594 aaPredicted RBP21.4■■□□□ 1.02
CCDC47-204ENST00000582252 TM4SF19Q96DZ7 209 aa21.4■■□□□ 1.02
CCDC47-204ENST00000582252 KLHDC7BQ96G42 594 aa21.4■■□□□ 1.02
CCDC47-204ENST00000582252 SERINC2Q96SA4 455 aa21.4■■□□□ 1.02
CCDC47-204ENST00000582252 TESMINQ9Y4I5 508 aa21.4■■□□□ 1.02
CCDC47-204ENST00000582252 CEPT1Q9Y6K0 416 aa21.4■■□□□ 1.02
CCDC47-204ENST00000582252 TDRD6O60522 2096 aaKnown RBP21.39■■□□□ 1.01
CCDC47-204ENST00000582252 SERPINB7O75635 380 aa21.39■■□□□ 1.01
CCDC47-204ENST00000582252 NR2F6P10588 404 aa21.39■■□□□ 1.01
CCDC47-204ENST00000582252 TDGF1P13385 188 aa21.39■■□□□ 1.01
CCDC47-204ENST00000582252 ANXA8P13928 327 aa21.39■■□□□ 1.01
CCDC47-204ENST00000582252 RHCEP18577 417 aa21.39■■□□□ 1.01
CCDC47-204ENST00000582252 MATN1P21941 496 aa21.39■■□□□ 1.01
CCDC47-204ENST00000582252 PRR5P85299 388 aa21.39■■□□□ 1.01
CCDC47-204ENST00000582252 LAPTM4AQ15012 233 aa21.39■■□□□ 1.01
CCDC47-204ENST00000582252 TSSK4Q6SA08 328 aa21.39■■□□□ 1.01
CCDC47-204ENST00000582252 ABHD13Q7L211 337 aa21.39■■□□□ 1.01
CCDC47-204ENST00000582252 C1orf210Q8IVY1 113 aa21.39■■□□□ 1.01
CCDC47-204ENST00000582252 PROX1Q92786 737 aa21.39■■□□□ 1.01
CCDC47-204ENST00000582252 PIP5K1AQ99755 562 aa21.39■■□□□ 1.01
CCDC47-204ENST00000582252 C3orf14Q9HBI5 128 aa21.39■■□□□ 1.01
CCDC47-204ENST00000582252 PRDM9Q9NQV7 894 aa21.39■■□□□ 1.01
CCDC47-204ENST00000582252 DNAAF2Q9NVR5 837 aaKnown RBP21.39■■□□□ 1.01
CCDC47-204ENST00000582252 RSL24D1Q9UHA3 163 aaKnown RBP21.39■■□□□ 1.01
CCDC47-204ENST00000582252 CES1P1Q9UKY3 287 aa21.39■■□□□ 1.01
CCDC47-204ENST00000582252 GMPPBQ9Y5P6 360 aa21.39■■□□□ 1.01
CCDC47-204ENST00000582252 SNX11Q9Y5W9 270 aa21.39■■□□□ 1.01
CCDC47-204ENST00000582252 ENPP4Q9Y6X5 453 aa21.39■■□□□ 1.01
CCDC47-204ENST00000582252 ARHGEF17Q96PE2 2063 aaPredicted RBP21.39■■□□□ 1.01
CCDC47-204ENST00000582252 TP53BP1Q12888 1972 aaPredicted RBP21.39■■□□□ 1.01
CCDC47-204ENST00000582252 MITFO75030 526 aaPredicted RBP21.38■■□□□ 1.01
CCDC47-204ENST00000582252 FHP07954 510 aa21.38■■□□□ 1.01
CCDC47-204ENST00000582252 ZNF888P0CJ79 500 aaPredicted RBP21.38■■□□□ 1.01
CCDC47-204ENST00000582252 CRHBPP24387 322 aa21.38■■□□□ 1.01
CCDC47-204ENST00000582252 ISL1P61371 349 aa21.38■■□□□ 1.01
CCDC47-204ENST00000582252 IL5RAQ01344 420 aa21.38■■□□□ 1.01
CCDC47-204ENST00000582252 CD47Q08722 323 aa21.38■■□□□ 1.01
CCDC47-204ENST00000582252 FBXO42Q6P3S6 717 aa21.38■■□□□ 1.01
CCDC47-204ENST00000582252 TRIM73Q86UV7 250 aa21.38■■□□□ 1.01
CCDC47-204ENST00000582252 WDR5BQ86VZ2 330 aa21.38■■□□□ 1.01
CCDC47-204ENST00000582252 PARGQ86W56 976 aa21.38■■□□□ 1.01
CCDC47-204ENST00000582252 KRT73Q86Y46 540 aa21.38■■□□□ 1.01
CCDC47-204ENST00000582252 DEFB119Q8N690 84 aa21.38■■□□□ 1.01
CCDC47-204ENST00000582252 UTP15Q8TED0 518 aaKnown RBP21.38■■□□□ 1.01
CCDC47-204ENST00000582252 RSC1A1Q92681 617 aa21.38■■□□□ 1.01
CCDC47-204ENST00000582252 UCN3Q969E3 161 aa21.38■■□□□ 1.01
CCDC47-204ENST00000582252 RERGQ96A58 199 aaPredicted RBP21.38■■□□□ 1.01
CCDC47-204ENST00000582252 NMD3Q96D46 503 aaKnown RBP21.38■■□□□ 1.01
CCDC47-204ENST00000582252 HSPA12BQ96MM6 686 aa21.38■■□□□ 1.01
CCDC47-204ENST00000582252 SLC6A18Q96N87 628 aa21.38■■□□□ 1.01
CCDC47-204ENST00000582252 OR2A5Q96R48 311 aa21.38■■□□□ 1.01
CCDC47-204ENST00000582252 ZFYVE21Q9BQ24 234 aa21.38■■□□□ 1.01
CCDC47-204ENST00000582252 TUBA1CQ9BQE3 449 aa21.38■■□□□ 1.01
CCDC47-204ENST00000582252 SPATA5L1Q9BVQ7 753 aa21.38■■□□□ 1.01
CCDC47-204ENST00000582252 NPLQ9BXD5 320 aaPredicted RBP21.38■■□□□ 1.01
CCDC47-204ENST00000582252 OR51I1Q9H343 314 aa21.38■■□□□ 1.01
CCDC47-204ENST00000582252 PAPOLBQ9NRJ5 636 aaKnown RBP21.38■■□□□ 1.01
CCDC47-204ENST00000582252 TRPC4Q9UBN4 977 aa21.38■■□□□ 1.01
CCDC47-204ENST00000582252 A0A0J9YY10 115 aa21.38■■□□□ 1.01
CCDC47-204ENST00000582252 GLOD5A6NK44 160 aa21.38■■□□□ 1.01
CCDC47-204ENST00000582252 PGRMC2O15173 223 aa21.38■■□□□ 1.01
CCDC47-204ENST00000582252 SLC28A2O43868 658 aa21.38■■□□□ 1.01
CCDC47-204ENST00000582252 PRAMEF10O60809 474 aa21.38■■□□□ 1.01
CCDC47-204ENST00000582252 CCDC159P0C7I6 412 aa21.38■■□□□ 1.01
CCDC47-204ENST00000582252 BCKDHBP21953 392 aa21.38■■□□□ 1.01
CCDC47-204ENST00000582252 XCR1P46094 333 aa21.38■■□□□ 1.01
CCDC47-204ENST00000582252 OR1E2P47887 323 aa21.38■■□□□ 1.01
CCDC47-204ENST00000582252 FNTBP49356 437 aa21.38■■□□□ 1.01
CCDC47-204ENST00000582252 FZD2Q14332 565 aa21.38■■□□□ 1.01
CCDC47-204ENST00000582252 CEBPEQ15744 281 aa21.38■■□□□ 1.01
CCDC47-204ENST00000582252 SLC44A2Q8IWA5 706 aaPredicted RBP21.38■■□□□ 1.01
CCDC47-204ENST00000582252 GALNT15Q8N3T1 639 aa21.38■■□□□ 1.01
CCDC47-204ENST00000582252 SMYD1Q8NB12 490 aa21.38■■□□□ 1.01
CCDC47-204ENST00000582252 KCT2Q8NC54 265 aa21.38■■□□□ 1.01
CCDC47-204ENST00000582252 FBLIM1Q8WUP2 373 aa21.38■■□□□ 1.01
CCDC47-204ENST00000582252 RAB8BQ92930 207 aa21.38■■□□□ 1.01
CCDC47-204ENST00000582252 ZNF566Q969W8 418 aa21.38■■□□□ 1.01
CCDC47-204ENST00000582252 DUSP15Q9H1R2 295 aaPredicted RBP21.38■■□□□ 1.01
CCDC47-204ENST00000582252 SH3GLB1Q9Y371 365 aa21.38■■□□□ 1.01
CCDC47-204ENST00000582252 H3BSA7 217 aa21.37■■□□□ 1.01
CCDC47-204ENST00000582252 EMC8O43402 210 aa21.37■■□□□ 1.01
CCDC47-204ENST00000582252 B4GALT2O60909 372 aa21.37■■□□□ 1.01
CCDC47-204ENST00000582252 ABCB7O75027 752 aa21.37■■□□□ 1.01
CCDC47-204ENST00000582252 PRKRAO75569 313 aaKnown RBP21.37■■□□□ 1.01
CCDC47-204ENST00000582252 NR2F1P10589 423 aa21.37■■□□□ 1.01
CCDC47-204ENST00000582252 TNFRSF1BP20333 461 aa21.37■■□□□ 1.01
CCDC47-204ENST00000582252 TLX1P31314 330 aaPredicted RBP21.37■■□□□ 1.01
CCDC47-204ENST00000582252 CDH12P55289 794 aa21.37■■□□□ 1.01
CCDC47-204ENST00000582252 RACK1P63244 317 aaKnown RBP21.37■■□□□ 1.01
CCDC47-204ENST00000582252 TNFRSF17Q02223 184 aa21.37■■□□□ 1.01
CCDC47-204ENST00000582252 MEP1AQ16819 746 aa21.37■■□□□ 1.01
CCDC47-204ENST00000582252 MANEAQ5SRI9 462 aa21.37■■□□□ 1.01
CCDC47-204ENST00000582252 C18orf63Q68DL7 685 aa21.37■■□□□ 1.01
CCDC47-204ENST00000582252 FCRL6Q6DN72 434 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms