RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 NAV2Q8IVL1 2488 aa9.52□□□□□ -0.89
PPP4R1-220ENST00000581835 C10orf107Q8IVU9 208 aa9.52□□□□□ -0.89
PPP4R1-220ENST00000581835 SRRM1Q8IYB3 904 aaKnown RBP9.52□□□□□ -0.89
PPP4R1-220ENST00000581835 MMP21Q8N119 569 aa9.52□□□□□ -0.89
PPP4R1-220ENST00000581835 CYP4Z2PQ8N1L4 340 aa9.52□□□□□ -0.89
PPP4R1-220ENST00000581835 CPSF7Q8N684 471 aaKnown RBP9.52□□□□□ -0.89
PPP4R1-220ENST00000581835 GBP7Q8N8V2 638 aaPredicted RBP9.52□□□□□ -0.89
PPP4R1-220ENST00000581835 FAM98AQ8NCA5 519 aaKnown RBP9.52□□□□□ -0.89
PPP4R1-220ENST00000581835 OR4K14Q8NGD5 310 aa9.52□□□□□ -0.89
PPP4R1-220ENST00000581835 OR5L2Q8NGL0 311 aa9.52□□□□□ -0.89
PPP4R1-220ENST00000581835 SREK1Q8WXA9 508 aaKnown RBP9.52□□□□□ -0.89
PPP4R1-220ENST00000581835 RIT1Q92963 219 aa9.52□□□□□ -0.89
PPP4R1-220ENST00000581835 TMEM125Q96AQ2 219 aa9.52□□□□□ -0.89
PPP4R1-220ENST00000581835 APIPQ96GX9 242 aa9.52□□□□□ -0.89
PPP4R1-220ENST00000581835 FBXL20Q96IG2 436 aa9.52□□□□□ -0.89
PPP4R1-220ENST00000581835 APOPT1Q96IL0 206 aa9.52□□□□□ -0.89
PPP4R1-220ENST00000581835 FRMD6Q96NE9 622 aa9.52□□□□□ -0.89
PPP4R1-220ENST00000581835 RASL10BQ96S79 203 aa9.52□□□□□ -0.89
PPP4R1-220ENST00000581835 TMEM109Q9BVC6 243 aa9.52□□□□□ -0.89
PPP4R1-220ENST00000581835 MCM8Q9UJA3 840 aa9.52□□□□□ -0.89
PPP4R1-220ENST00000581835 ERRFI1Q9UJM3 462 aaPredicted RBP9.52□□□□□ -0.89
PPP4R1-220ENST00000581835 MID2Q9UJV3 735 aa9.52□□□□□ -0.89
PPP4R1-220ENST00000581835 CES1P1Q9UKY3 287 aa9.52□□□□□ -0.89
PPP4R1-220ENST00000581835 RAB21Q9UL25 225 aa9.52□□□□□ -0.89
PPP4R1-220ENST00000581835 ERVK-19Q9WJR5 959 aa9.52□□□□□ -0.89
PPP4R1-220ENST00000581835 PCDHA9Q9Y5H5 950 aa9.52□□□□□ -0.89
PPP4R1-220ENST00000581835 CENPEQ02224 2701 aa9.52□□□□□ -0.89
PPP4R1-220ENST00000581835 A8MVJ9 347 aa9.51□□□□□ -0.89
PPP4R1-220ENST00000581835 OR6B1O95007 311 aa9.51□□□□□ -0.89
PPP4R1-220ENST00000581835 CLPSP04118 112 aa9.51□□□□□ -0.89
PPP4R1-220ENST00000581835 RNF224P0DH78 156 aa9.51□□□□□ -0.89
PPP4R1-220ENST00000581835 PORP16435 677 aaPredicted RBP9.51□□□□□ -0.89
PPP4R1-220ENST00000581835 SOX3P41225 446 aa9.51□□□□□ -0.89
PPP4R1-220ENST00000581835 XKP51811 444 aa9.51□□□□□ -0.89
PPP4R1-220ENST00000581835 SLC37A1P57057 533 aa9.51□□□□□ -0.89
PPP4R1-220ENST00000581835 KCNK10P57789 538 aa9.51□□□□□ -0.89
PPP4R1-220ENST00000581835 TRA2BP62995 288 aaKnown RBP9.51□□□□□ -0.89
PPP4R1-220ENST00000581835 ALDH6A1Q02252 535 aaKnown RBP9.51□□□□□ -0.89
PPP4R1-220ENST00000581835 ZNF750Q32MQ0 723 aa9.51□□□□□ -0.89
PPP4R1-220ENST00000581835 SPIN4Q56A73 249 aa9.51□□□□□ -0.89
PPP4R1-220ENST00000581835 PIGGQ5H8A4 983 aa9.51□□□□□ -0.89
PPP4R1-220ENST00000581835 SCIMPQ6UWF3 145 aa9.51□□□□□ -0.89
PPP4R1-220ENST00000581835 IL20RBQ6UXL0 311 aa9.51□□□□□ -0.89
PPP4R1-220ENST00000581835 GFRALQ6UXV0 394 aa9.51□□□□□ -0.89
PPP4R1-220ENST00000581835 SULF2Q8IWU5 870 aa9.51□□□□□ -0.89
PPP4R1-220ENST00000581835 C9orf40Q8IXQ3 194 aa9.51□□□□□ -0.89
PPP4R1-220ENST00000581835 GPALPP1Q8IXQ4 340 aa9.51□□□□□ -0.89
PPP4R1-220ENST00000581835 NUBPLQ8TB37 319 aa9.51□□□□□ -0.89
PPP4R1-220ENST00000581835 SSC4DQ8WTU2 575 aa9.51□□□□□ -0.89
PPP4R1-220ENST00000581835 ASB15Q8WXK1 588 aa9.51□□□□□ -0.89
PPP4R1-220ENST00000581835 C11orf24Q96F05 449 aaPredicted RBP9.51□□□□□ -0.89
PPP4R1-220ENST00000581835 PSMG3-AS1Q96PY0 264 aa9.51□□□□□ -0.89
PPP4R1-220ENST00000581835 CNPPD1Q9BV87 410 aa9.51□□□□□ -0.89
PPP4R1-220ENST00000581835 IQCGQ9H095 443 aaKnown RBP9.51□□□□□ -0.89
PPP4R1-220ENST00000581835 TNFRSF12AQ9NP84 129 aa9.51□□□□□ -0.89
PPP4R1-220ENST00000581835 HPF1Q9NWY4 346 aa9.51□□□□□ -0.89
PPP4R1-220ENST00000581835 SLC17A7Q9P2U7 560 aa9.51□□□□□ -0.89
PPP4R1-220ENST00000581835 SEC14L3Q9UDX4 400 aa9.51□□□□□ -0.89
PPP4R1-220ENST00000581835 OSGIN2Q9Y236 505 aa9.51□□□□□ -0.89
PPP4R1-220ENST00000581835 SLC5A6Q9Y289 635 aa9.51□□□□□ -0.89
PPP4R1-220ENST00000581835 KLF13Q9Y2Y9 288 aaPredicted RBP9.51□□□□□ -0.89
PPP4R1-220ENST00000581835 EXPH5Q8NEV8 1989 aa9.51□□□□□ -0.89
PPP4R1-220ENST00000581835 WIPF3A6NGB9 483 aa9.5□□□□□ -0.89
PPP4R1-220ENST00000581835 KLRC4-KLRK1H3BQV0 150 aa9.5□□□□□ -0.89
PPP4R1-220ENST00000581835 PEX1O43933 1283 aa9.5□□□□□ -0.89
PPP4R1-220ENST00000581835 PCDH7O60245 1069 aa9.5□□□□□ -0.89
PPP4R1-220ENST00000581835 TRIM13O60858 407 aa9.5□□□□□ -0.89
PPP4R1-220ENST00000581835 SPAG7O75391 227 aa9.5□□□□□ -0.89
PPP4R1-220ENST00000581835 ERAL1O75616 437 aaKnown RBP9.5□□□□□ -0.89
PPP4R1-220ENST00000581835 UNC5CO95185 931 aa9.5□□□□□ -0.89
PPP4R1-220ENST00000581835 STSP08842 583 aa9.5□□□□□ -0.89
PPP4R1-220ENST00000581835 CT62P0C5K7 136 aa9.5□□□□□ -0.89
PPP4R1-220ENST00000581835 CPMP14384 443 aa9.5□□□□□ -0.89
PPP4R1-220ENST00000581835 CREB1P16220 341 aa9.5□□□□□ -0.89
PPP4R1-220ENST00000581835 SERPINB3P29508 390 aa9.5□□□□□ -0.89
PPP4R1-220ENST00000581835 DEKP35659 375 aaKnown RBP9.5□□□□□ -0.89
PPP4R1-220ENST00000581835 FEN1P39748 380 aaKnown RBP9.5□□□□□ -0.89
PPP4R1-220ENST00000581835 MEOX1P50221 254 aa9.5□□□□□ -0.89
PPP4R1-220ENST00000581835 BTKQ06187 659 aa9.5□□□□□ -0.89
PPP4R1-220ENST00000581835 ACSM2AQ08AH3 577 aa9.5□□□□□ -0.89
PPP4R1-220ENST00000581835 FUT7Q11130 342 aa9.5□□□□□ -0.89
PPP4R1-220ENST00000581835 ASPHQ12797 758 aa9.5□□□□□ -0.89
PPP4R1-220ENST00000581835 EBPQ15125 230 aaKnown RBP9.5□□□□□ -0.89
PPP4R1-220ENST00000581835 KRTCAP3Q53RY4 240 aa9.5□□□□□ -0.89
PPP4R1-220ENST00000581835 RNFT1Q5M7Z0 435 aa9.5□□□□□ -0.89
PPP4R1-220ENST00000581835 ACSM2BQ68CK6 577 aa9.5□□□□□ -0.89
PPP4R1-220ENST00000581835 GALNT18Q6P9A2 607 aa9.5□□□□□ -0.89
PPP4R1-220ENST00000581835 OPN5Q6U736 354 aa9.5□□□□□ -0.89
PPP4R1-220ENST00000581835 RNF111Q6ZNA4 994 aa9.5□□□□□ -0.89
PPP4R1-220ENST00000581835 TRIM46Q7Z4K8 759 aa9.5□□□□□ -0.89
PPP4R1-220ENST00000581835 SIAH3Q8IW03 269 aa9.5□□□□□ -0.89
PPP4R1-220ENST00000581835 GALNT12Q8IXK2 581 aa9.5□□□□□ -0.89
PPP4R1-220ENST00000581835 PSD4Q8NDX1 1056 aa9.5□□□□□ -0.89
PPP4R1-220ENST00000581835 TCP10LQ8TDR4 215 aa9.5□□□□□ -0.89
PPP4R1-220ENST00000581835 FAM111AQ96PZ2 611 aa9.5□□□□□ -0.89
PPP4R1-220ENST00000581835 FAIM2Q9BWQ8 316 aa9.5□□□□□ -0.89
PPP4R1-220ENST00000581835 GATA5Q9BWX5 397 aaPredicted RBP9.5□□□□□ -0.89
PPP4R1-220ENST00000581835 SHCBP1LQ9BZQ2 653 aa9.5□□□□□ -0.89
PPP4R1-220ENST00000581835 CXorf21Q9HAI6 301 aa9.5□□□□□ -0.89
PPP4R1-220ENST00000581835 TIMMDC1Q9NPL8 285 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms