RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 C9orf40Q8IXQ3 194 aa18.06■□□□□ 0.48
SREBF1-220ENST00000581707 C1orf52Q8N6N3 182 aaKnown RBP18.06■□□□□ 0.48
SREBF1-220ENST00000581707 PSD4Q8NDX1 1056 aa18.06■□□□□ 0.48
SREBF1-220ENST00000581707 GSTO2Q9H4Y5 243 aa18.06■□□□□ 0.48
SREBF1-220ENST00000581707 EML6Q6ZMW3 1958 aa18.06■□□□□ 0.48
SREBF1-220ENST00000581707 A0A1W2PS29 197 aa18.05■□□□□ 0.48
SREBF1-220ENST00000581707 CCDC151A5D8V7 595 aa18.05■□□□□ 0.48
SREBF1-220ENST00000581707 PLIN3O60664 434 aa18.05■□□□□ 0.48
SREBF1-220ENST00000581707 ZNF354AO60765 605 aaPredicted RBP18.05■□□□□ 0.48
SREBF1-220ENST00000581707 ESRRBO95718 433 aa18.05■□□□□ 0.48
SREBF1-220ENST00000581707 CLDN1O95832 211 aa18.05■□□□□ 0.48
SREBF1-220ENST00000581707 ENO1P06733 434 aaKnown RBP18.05■□□□□ 0.48
SREBF1-220ENST00000581707 RFC3P40938 356 aa18.05■□□□□ 0.48
SREBF1-220ENST00000581707 CA7P43166 264 aa18.05■□□□□ 0.48
SREBF1-220ENST00000581707 XKP51811 444 aa18.05■□□□□ 0.48
SREBF1-220ENST00000581707 CASP6P55212 293 aa18.05■□□□□ 0.48
SREBF1-220ENST00000581707 ASPHQ12797 758 aa18.05■□□□□ 0.48
SREBF1-220ENST00000581707 ZNF750Q32MQ0 723 aa18.05■□□□□ 0.48
SREBF1-220ENST00000581707 HIST2H2BCQ6DN03 193 aa18.05■□□□□ 0.48
SREBF1-220ENST00000581707 RNF111Q6ZNA4 994 aa18.05■□□□□ 0.48
SREBF1-220ENST00000581707 RTL4Q6ZR62 310 aa18.05■□□□□ 0.48
SREBF1-220ENST00000581707 GBP7Q8N8V2 638 aaPredicted RBP18.05■□□□□ 0.48
SREBF1-220ENST00000581707 ZFP62Q8NB50 900 aaPredicted RBP18.05■□□□□ 0.48
SREBF1-220ENST00000581707 CHTF18Q8WVB6 975 aa18.05■□□□□ 0.48
SREBF1-220ENST00000581707 TM4SF18Q96CE8 201 aa18.05■□□□□ 0.48
SREBF1-220ENST00000581707 MAGED4Q96JG8 741 aa18.05■□□□□ 0.48
SREBF1-220ENST00000581707 SGCZQ96LD1 299 aa18.05■□□□□ 0.48
SREBF1-220ENST00000581707 CXorf21Q9HAI6 301 aa18.05■□□□□ 0.48
SREBF1-220ENST00000581707 PCDHA9Q9Y5H5 950 aa18.05■□□□□ 0.48
SREBF1-220ENST00000581707 CENPEQ02224 2701 aa18.04■□□□□ 0.48
SREBF1-220ENST00000581707 TLDC2A0PJX2 215 aa18.04■□□□□ 0.48
SREBF1-220ENST00000581707 C1orf226A1L170 272 aa18.04■□□□□ 0.48
SREBF1-220ENST00000581707 CCL21O00585 134 aa18.04■□□□□ 0.48
SREBF1-220ENST00000581707 COPEO14579 308 aa18.04■□□□□ 0.48
SREBF1-220ENST00000581707 TFECO14948 347 aaPredicted RBP18.04■□□□□ 0.48
SREBF1-220ENST00000581707 ZG16O60844 167 aa18.04■□□□□ 0.48
SREBF1-220ENST00000581707 CHN1P15882 459 aa18.04■□□□□ 0.48
SREBF1-220ENST00000581707 KRT4P19013 534 aa18.04■□□□□ 0.48
SREBF1-220ENST00000581707 NAGLUP54802 743 aa18.04■□□□□ 0.48
SREBF1-220ENST00000581707 SLC37A1P57057 533 aa18.04■□□□□ 0.48
SREBF1-220ENST00000581707 SLC29A4Q7RTT9 530 aa18.04■□□□□ 0.48
SREBF1-220ENST00000581707 SPPL2CQ8IUH8 684 aa18.04■□□□□ 0.48
SREBF1-220ENST00000581707 GHDCQ8N2G8 530 aa18.04■□□□□ 0.48
SREBF1-220ENST00000581707 CCDC63Q8NA47 563 aa18.04■□□□□ 0.48
SREBF1-220ENST00000581707 GOLM1Q8NBJ4 401 aa18.04■□□□□ 0.48
SREBF1-220ENST00000581707 OR2W6PQ8NHA6 318 aa18.04■□□□□ 0.48
SREBF1-220ENST00000581707 C16orf52Q8NHV5 167 aa18.04■□□□□ 0.48
SREBF1-220ENST00000581707 RDH11Q8TC12 318 aa18.04■□□□□ 0.48
SREBF1-220ENST00000581707 SLC22A8Q8TCC7 542 aa18.04■□□□□ 0.48
SREBF1-220ENST00000581707 AGAP11Q8TF27 550 aa18.04■□□□□ 0.48
SREBF1-220ENST00000581707 MID1IP1Q9NPA3 183 aa18.04■□□□□ 0.48
SREBF1-220ENST00000581707 DEPPQ9NTK1 212 aa18.04■□□□□ 0.48
SREBF1-220ENST00000581707 SH3BGRL2Q9UJC5 107 aa18.04■□□□□ 0.48
SREBF1-220ENST00000581707 CES1P1Q9UKY3 287 aa18.04■□□□□ 0.48
SREBF1-220ENST00000581707 ZNF835Q9Y2P0 537 aa18.04■□□□□ 0.48
SREBF1-220ENST00000581707 TIMM22Q9Y584 194 aa18.04■□□□□ 0.48
SREBF1-220ENST00000581707 CROCCQ5TZA2 2017 aa18.04■□□□□ 0.48
SREBF1-220ENST00000581707 OR6C76A6NM76 312 aa18.03■□□□□ 0.48
SREBF1-220ENST00000581707 UBFD1O14562 309 aaKnown RBP18.03■□□□□ 0.48
SREBF1-220ENST00000581707 CPMP14384 443 aa18.03■□□□□ 0.48
SREBF1-220ENST00000581707 CPA3P15088 417 aa18.03■□□□□ 0.48
SREBF1-220ENST00000581707 PORP16435 677 aaPredicted RBP18.03■□□□□ 0.48
SREBF1-220ENST00000581707 DEKP35659 375 aaKnown RBP18.03■□□□□ 0.48
SREBF1-220ENST00000581707 HTR6P50406 440 aa18.03■□□□□ 0.48
SREBF1-220ENST00000581707 DNAJB13P59910 316 aa18.03■□□□□ 0.48
SREBF1-220ENST00000581707 NAA20P61599 178 aa18.03■□□□□ 0.48
SREBF1-220ENST00000581707 TRA2BP62995 288 aaKnown RBP18.03■□□□□ 0.48
SREBF1-220ENST00000581707 SLC18A2Q05940 514 aa18.03■□□□□ 0.48
SREBF1-220ENST00000581707 CFAP157Q5JU67 520 aa18.03■□□□□ 0.48
SREBF1-220ENST00000581707 SLC48A1Q6P1K1 146 aa18.03■□□□□ 0.48
SREBF1-220ENST00000581707 BNC2Q6ZN30 1099 aaPredicted RBP18.03■□□□□ 0.48
SREBF1-220ENST00000581707 MMP21Q8N119 569 aa18.03■□□□□ 0.48
SREBF1-220ENST00000581707 C4orf33Q8N1A6 199 aa18.03■□□□□ 0.48
SREBF1-220ENST00000581707 SLC15A4Q8N697 577 aa18.03■□□□□ 0.48
SREBF1-220ENST00000581707 OR2M7Q8NG81 312 aa18.03■□□□□ 0.48
SREBF1-220ENST00000581707 GAL3ST4Q96RP7 486 aa18.03■□□□□ 0.48
SREBF1-220ENST00000581707 KCNA7Q96RP8 456 aa18.03■□□□□ 0.48
SREBF1-220ENST00000581707 FAIM2Q9BWQ8 316 aa18.03■□□□□ 0.48
SREBF1-220ENST00000581707 ACPTQ9BZG2 426 aa18.03■□□□□ 0.48
SREBF1-220ENST00000581707 WWTR1Q9GZV5 400 aa18.03■□□□□ 0.48
SREBF1-220ENST00000581707 C12orf65Q9H3J6 166 aaKnown RBP18.03■□□□□ 0.48
SREBF1-220ENST00000581707 SUCOQ9UBS9 1254 aaKnown RBP18.03■□□□□ 0.48
SREBF1-220ENST00000581707 PSME2Q9UL46 239 aa18.03■□□□□ 0.48
SREBF1-220ENST00000581707 GOLGA6L10A6NI86 522 aa18.02■□□□□ 0.48
SREBF1-220ENST00000581707 HS6ST1O60243 411 aa18.02■□□□□ 0.48
SREBF1-220ENST00000581707 ZNF500O60304 480 aaPredicted RBP18.02■□□□□ 0.48
SREBF1-220ENST00000581707 SLU7O95391 586 aaKnown RBP18.02■□□□□ 0.48
SREBF1-220ENST00000581707 CLPSP04118 112 aa18.02■□□□□ 0.48
SREBF1-220ENST00000581707 NUDT17P0C025 328 aa18.02■□□□□ 0.48
SREBF1-220ENST00000581707 CNR1P21554 472 aa18.02■□□□□ 0.48
SREBF1-220ENST00000581707 NT5EP21589 574 aa18.02■□□□□ 0.48
SREBF1-220ENST00000581707 SSTR4P31391 388 aa18.02■□□□□ 0.48
SREBF1-220ENST00000581707 HSF1Q00613 529 aa18.02■□□□□ 0.48
SREBF1-220ENST00000581707 HMGCS1Q01581 520 aa18.02■□□□□ 0.48
SREBF1-220ENST00000581707 EBPQ15125 230 aaKnown RBP18.02■□□□□ 0.48
SREBF1-220ENST00000581707 C3AR1Q16581 482 aa18.02■□□□□ 0.48
SREBF1-220ENST00000581707 ZNF791Q3KP31 576 aaPredicted RBP18.02■□□□□ 0.48
SREBF1-220ENST00000581707 C6orf163Q5TEZ5 329 aa18.02■□□□□ 0.48
SREBF1-220ENST00000581707 SCIMPQ6UWF3 145 aa18.02■□□□□ 0.48
SREBF1-220ENST00000581707 Q6ZPB1 254 aaPredicted RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms