RNA–Protein interactions for RNA: ENST00000577435.5

GGA3-203, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-203ENST00000577435 SPIN4Q56A73 249 aa12.96□□□□□ -0.33
GGA3-203ENST00000577435 SLC48A1Q6P1K1 146 aa12.96□□□□□ -0.33
GGA3-203ENST00000577435 GALNTL5Q7Z4T8 443 aa12.96□□□□□ -0.33
GGA3-203ENST00000577435 TCP10LQ8TDR4 215 aa12.96□□□□□ -0.33
GGA3-203ENST00000577435 TMEM125Q96AQ2 219 aa12.96□□□□□ -0.33
GGA3-203ENST00000577435 APIPQ96GX9 242 aa12.96□□□□□ -0.33
GGA3-203ENST00000577435 METTL2AQ96IZ6 378 aaKnown RBP12.96□□□□□ -0.33
GGA3-203ENST00000577435 RASL10BQ96S79 203 aa12.96□□□□□ -0.33
GGA3-203ENST00000577435 SMC6Q96SB8 1091 aa12.96□□□□□ -0.33
GGA3-203ENST00000577435 FAIM2Q9BWQ8 316 aa12.96□□□□□ -0.33
GGA3-203ENST00000577435 HES7Q9BYE0 225 aa12.96□□□□□ -0.33
GGA3-203ENST00000577435 CXorf21Q9HAI6 301 aa12.96□□□□□ -0.33
GGA3-203ENST00000577435 KLHL1Q9NR64 748 aa12.96□□□□□ -0.33
GGA3-203ENST00000577435 PSME2Q9UL46 239 aa12.96□□□□□ -0.33
GGA3-203ENST00000577435 PCNX1Q96RV3 2341 aa12.95□□□□□ -0.34
GGA3-203ENST00000577435 DNAJC13O75165 2243 aa12.95□□□□□ -0.34
GGA3-203ENST00000577435 OR6C76A6NM76 312 aa12.95□□□□□ -0.34
GGA3-203ENST00000577435 HRKO00198 91 aa12.95□□□□□ -0.34
GGA3-203ENST00000577435 WWP2O00308 870 aa12.95□□□□□ -0.34
GGA3-203ENST00000577435 TYROBPO43914 113 aa12.95□□□□□ -0.34
GGA3-203ENST00000577435 OR10H2O60403 315 aa12.95□□□□□ -0.34
GGA3-203ENST00000577435 FGF4P08620 206 aa12.95□□□□□ -0.34
GGA3-203ENST00000577435 UROSP10746 265 aa12.95□□□□□ -0.34
GGA3-203ENST00000577435 CPMP14384 443 aa12.95□□□□□ -0.34
GGA3-203ENST00000577435 DRD2P14416 443 aa12.95□□□□□ -0.34
GGA3-203ENST00000577435 ALDH3A1P30838 453 aa12.95□□□□□ -0.34
GGA3-203ENST00000577435 GSTM5P46439 218 aa12.95□□□□□ -0.34
GGA3-203ENST00000577435 SLC37A1P57057 533 aa12.95□□□□□ -0.34
GGA3-203ENST00000577435 RAE1P78406 368 aaKnown RBP12.95□□□□□ -0.34
GGA3-203ENST00000577435 HMGCS1Q01581 520 aa12.95□□□□□ -0.34
GGA3-203ENST00000577435 ZNF844Q08AG5 666 aa12.95□□□□□ -0.34
GGA3-203ENST00000577435 ACSM2AQ08AH3 577 aa12.95□□□□□ -0.34
GGA3-203ENST00000577435 FUT7Q11130 342 aa12.95□□□□□ -0.34
GGA3-203ENST00000577435 ZNF267Q14586 743 aaPredicted RBP12.95□□□□□ -0.34
GGA3-203ENST00000577435 MAPKAPK3Q16644 382 aa12.95□□□□□ -0.34
GGA3-203ENST00000577435 TNFAIP8L3Q5GJ75 292 aa12.95□□□□□ -0.34
GGA3-203ENST00000577435 PIGGQ5H8A4 983 aa12.95□□□□□ -0.34
GGA3-203ENST00000577435 ACSM2BQ68CK6 577 aa12.95□□□□□ -0.34
GGA3-203ENST00000577435 C16orf47Q6ZP98 133 aaPredicted RBP12.95□□□□□ -0.34
GGA3-203ENST00000577435 RNF165Q6ZSG1 346 aa12.95□□□□□ -0.34
GGA3-203ENST00000577435 SLC15A4Q8N697 577 aa12.95□□□□□ -0.34
GGA3-203ENST00000577435 FAM98AQ8NCA5 519 aaKnown RBP12.95□□□□□ -0.34
GGA3-203ENST00000577435 PRR7Q8TB68 274 aa12.95□□□□□ -0.34
GGA3-203ENST00000577435 FAM111AQ96PZ2 611 aa12.95□□□□□ -0.34
GGA3-203ENST00000577435 LIN28AQ9H9Z2 209 aaKnown RBP12.95□□□□□ -0.34
GGA3-203ENST00000577435 TNFRSF12AQ9NP84 129 aa12.95□□□□□ -0.34
GGA3-203ENST00000577435 SLC17A7Q9P2U7 560 aa12.95□□□□□ -0.34
GGA3-203ENST00000577435 WBP11Q9Y2W2 641 aaKnown RBP12.95□□□□□ -0.34
GGA3-203ENST00000577435 KLF13Q9Y2Y9 288 aaPredicted RBP12.95□□□□□ -0.34
GGA3-203ENST00000577435 NINQ8N4C6 2090 aa12.95□□□□□ -0.34
GGA3-203ENST00000577435 GOLGA6L10A6NI86 522 aa12.94□□□□□ -0.34
GGA3-203ENST00000577435 A8MVJ9 347 aa12.94□□□□□ -0.34
GGA3-203ENST00000577435 KLRC4-KLRK1H3BQV0 150 aa12.94□□□□□ -0.34
GGA3-203ENST00000577435 NPHS1O60500 1241 aa12.94□□□□□ -0.34
GGA3-203ENST00000577435 SPAG7O75391 227 aa12.94□□□□□ -0.34
GGA3-203ENST00000577435 CLPSP04118 112 aa12.94□□□□□ -0.34
GGA3-203ENST00000577435 CREB1P16220 341 aa12.94□□□□□ -0.34
GGA3-203ENST00000577435 PORP16435 677 aaPredicted RBP12.94□□□□□ -0.34
GGA3-203ENST00000577435 CSNK2A2P19784 350 aaPredicted RBP12.94□□□□□ -0.34
GGA3-203ENST00000577435 PRPH2P23942 346 aa12.94□□□□□ -0.34
GGA3-203ENST00000577435 MST1P26927 711 aa12.94□□□□□ -0.34
GGA3-203ENST00000577435 SERPINB3P29508 390 aa12.94□□□□□ -0.34
GGA3-203ENST00000577435 TIA1P31483 386 aaKnown RBP eCLIP12.94□□□□□ -0.34
GGA3-203ENST00000577435 DEKP35659 375 aaKnown RBP12.94□□□□□ -0.34
GGA3-203ENST00000577435 ETV4P43268 484 aa12.94□□□□□ -0.34
GGA3-203ENST00000577435 ERVK-8P63133 956 aa12.94□□□□□ -0.34
GGA3-203ENST00000577435 KRT71Q3SY84 523 aa12.94□□□□□ -0.34
GGA3-203ENST00000577435 KRTCAP3Q53RY4 240 aa12.94□□□□□ -0.34
GGA3-203ENST00000577435 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.94□□□□□ -0.34
GGA3-203ENST00000577435 CROCCP2Q86T23 111 aa12.94□□□□□ -0.34
GGA3-203ENST00000577435 GALNT12Q8IXK2 581 aa12.94□□□□□ -0.34
GGA3-203ENST00000577435 C9orf40Q8IXQ3 194 aa12.94□□□□□ -0.34
GGA3-203ENST00000577435 CYP4Z2PQ8N1L4 340 aa12.94□□□□□ -0.34
GGA3-203ENST00000577435 POGLUT1Q8NBL1 392 aa12.94□□□□□ -0.34
GGA3-203ENST00000577435 FAM76AQ8TAV0 307 aa12.94□□□□□ -0.34
GGA3-203ENST00000577435 ASB15Q8WXK1 588 aa12.94□□□□□ -0.34
GGA3-203ENST00000577435 SGCZQ96LD1 299 aa12.94□□□□□ -0.34
GGA3-203ENST00000577435 ZNF681Q96N22 645 aa12.94□□□□□ -0.34
GGA3-203ENST00000577435 FRMD6Q96NE9 622 aa12.94□□□□□ -0.34
GGA3-203ENST00000577435 CNPPD1Q9BV87 410 aa12.94□□□□□ -0.34
GGA3-203ENST00000577435 SSU72Q9NP77 194 aaKnown RBP12.94□□□□□ -0.34
GGA3-203ENST00000577435 TIMMDC1Q9NPL8 285 aa12.94□□□□□ -0.34
GGA3-203ENST00000577435 HPF1Q9NWY4 346 aa12.94□□□□□ -0.34
GGA3-203ENST00000577435 HEY2Q9UBP5 337 aa12.94□□□□□ -0.34
GGA3-203ENST00000577435 ERVK-19Q9WJR5 959 aa12.94□□□□□ -0.34
GGA3-203ENST00000577435 DLGAP4Q9Y2H0 992 aa12.94□□□□□ -0.34
GGA3-203ENST00000577435 CCL27Q9Y4X3 112 aa12.94□□□□□ -0.34
GGA3-203ENST00000577435 ZNF407Q9C0G0 2248 aa12.93□□□□□ -0.34
GGA3-203ENST00000577435 A0A1W2PS29 197 aa12.93□□□□□ -0.34
GGA3-203ENST00000577435 WIPF3A6NGB9 483 aa12.93□□□□□ -0.34
GGA3-203ENST00000577435 AZIN1O14977 448 aa12.93□□□□□ -0.34
GGA3-203ENST00000577435 RGS16O15492 202 aaPredicted RBP12.93□□□□□ -0.34
GGA3-203ENST00000577435 PCDH7O60245 1069 aa12.93□□□□□ -0.34
GGA3-203ENST00000577435 ZNF354AO60765 605 aaPredicted RBP12.93□□□□□ -0.34
GGA3-203ENST00000577435 SEMA7AO75326 666 aa12.93□□□□□ -0.34
GGA3-203ENST00000577435 CRCPO75575 148 aa12.93□□□□□ -0.34
GGA3-203ENST00000577435 RSL1D1O76021 490 aaKnown RBP12.93□□□□□ -0.34
GGA3-203ENST00000577435 OR6B1O95007 311 aa12.93□□□□□ -0.34
GGA3-203ENST00000577435 ATP1B1P05026 303 aa12.93□□□□□ -0.34
GGA3-203ENST00000577435 STSP08842 583 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms