RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 PCDH1Q08174 1060 aa8.23□□□□□ -1.09
SMG6-218ENST00000575454 ILF2Q12905 390 aaKnown RBP8.23□□□□□ -1.09
SMG6-218ENST00000575454 RPS6KA2Q15349 733 aa8.23□□□□□ -1.09
SMG6-218ENST00000575454 TOMM20Q15388 145 aa8.23□□□□□ -1.09
SMG6-218ENST00000575454 RNF111Q6ZNA4 994 aa8.23□□□□□ -1.09
SMG6-218ENST00000575454 PPIL6Q8IXY8 311 aa8.23□□□□□ -1.09
SMG6-218ENST00000575454 ST13P4Q8IZP2 240 aaPredicted RBP8.23□□□□□ -1.09
SMG6-218ENST00000575454 NAT8LQ8N9F0 302 aa8.23□□□□□ -1.09
SMG6-218ENST00000575454 BBOF1Q8ND07 529 aa8.23□□□□□ -1.09
SMG6-218ENST00000575454 WNT2BQ93097 391 aa8.23□□□□□ -1.09
SMG6-218ENST00000575454 TP53INP1Q96A56 240 aa8.23□□□□□ -1.09
SMG6-218ENST00000575454 MAGOHBQ96A72 148 aaKnown RBP8.23□□□□□ -1.09
SMG6-218ENST00000575454 RHBDF1Q96CC6 855 aa8.23□□□□□ -1.09
SMG6-218ENST00000575454 DTNBP1Q96EV8 351 aa8.23□□□□□ -1.09
SMG6-218ENST00000575454 WDR34Q96EX3 536 aa8.23□□□□□ -1.09
SMG6-218ENST00000575454 PTCD3Q96EY7 689 aaKnown RBP8.23□□□□□ -1.09
SMG6-218ENST00000575454 CERS2Q96G23 380 aa8.23□□□□□ -1.09
SMG6-218ENST00000575454 WDYHV1Q96HA8 205 aa8.23□□□□□ -1.09
SMG6-218ENST00000575454 F2RL3Q96RI0 385 aa8.23□□□□□ -1.09
SMG6-218ENST00000575454 UCN2Q96RP3 112 aa8.23□□□□□ -1.09
SMG6-218ENST00000575454 GAL3ST4Q96RP7 486 aa8.23□□□□□ -1.09
SMG6-218ENST00000575454 KRT12Q99456 494 aa8.23□□□□□ -1.09
SMG6-218ENST00000575454 CENPKQ9BS16 269 aa8.23□□□□□ -1.09
SMG6-218ENST00000575454 UGT2B28Q9BY64 529 aa8.23□□□□□ -1.09
SMG6-218ENST00000575454 ANGPTL4Q9BY76 406 aa8.23□□□□□ -1.09
SMG6-218ENST00000575454 PHACTR1Q9C0D0 580 aa8.23□□□□□ -1.09
SMG6-218ENST00000575454 WWTR1Q9GZV5 400 aa8.23□□□□□ -1.09
SMG6-218ENST00000575454 RPF2Q9H7B2 306 aaKnown RBP8.23□□□□□ -1.09
SMG6-218ENST00000575454 SNX15Q9NRS6 342 aa8.23□□□□□ -1.09
SMG6-218ENST00000575454 DNAJC11Q9NVH1 559 aa8.23□□□□□ -1.09
SMG6-218ENST00000575454 CTNNAL1Q9UBT7 734 aa8.23□□□□□ -1.09
SMG6-218ENST00000575454 SCN2AQ99250 2005 aa8.23□□□□□ -1.09
SMG6-218ENST00000575454 A0A1W2PPR1 153 aa8.22□□□□□ -1.09
SMG6-218ENST00000575454 NPEPPSL1A6NEC2 478 aa8.22□□□□□ -1.09
SMG6-218ENST00000575454 A8MXE2 369 aa8.22□□□□□ -1.09
SMG6-218ENST00000575454 KDM4EB2RXH2 506 aaPredicted RBP8.22□□□□□ -1.09
SMG6-218ENST00000575454 CDC7O00311 574 aa8.22□□□□□ -1.09
SMG6-218ENST00000575454 CTIFO43310 598 aaKnown RBP8.22□□□□□ -1.09
SMG6-218ENST00000575454 FGF17O60258 216 aa8.22□□□□□ -1.09
SMG6-218ENST00000575454 OR10H2O60403 315 aa8.22□□□□□ -1.09
SMG6-218ENST00000575454 TMCC2O75069 709 aa8.22□□□□□ -1.09
SMG6-218ENST00000575454 CRLF1O75462 422 aa8.22□□□□□ -1.09
SMG6-218ENST00000575454 TBX6O95947 436 aaPredicted RBP8.22□□□□□ -1.09
SMG6-218ENST00000575454 IFNA2P01563 188 aa8.22□□□□□ -1.09
SMG6-218ENST00000575454 ZNF37AP17032 561 aaPredicted RBP8.22□□□□□ -1.09
SMG6-218ENST00000575454 CHMP24386 653 aa8.22□□□□□ -1.09
SMG6-218ENST00000575454 GALNSP34059 522 aa8.22□□□□□ -1.09
SMG6-218ENST00000575454 GGT5P36269 586 aa8.22□□□□□ -1.09
SMG6-218ENST00000575454 MC3RP41968 323 aa8.22□□□□□ -1.09
SMG6-218ENST00000575454 GDF5P43026 501 aa8.22□□□□□ -1.09
SMG6-218ENST00000575454 ID2Q02363 134 aa8.22□□□□□ -1.09
SMG6-218ENST00000575454 CBLBQ13191 982 aa8.22□□□□□ -1.09
SMG6-218ENST00000575454 ZNF267Q14586 743 aaPredicted RBP8.22□□□□□ -1.09
SMG6-218ENST00000575454 TBCCQ15814 346 aa8.22□□□□□ -1.09
SMG6-218ENST00000575454 SPRED3Q2MJR0 410 aa8.22□□□□□ -1.09
SMG6-218ENST00000575454 CDKL4Q5MAI5 379 aa8.22□□□□□ -1.09
SMG6-218ENST00000575454 TEDDM1Q5T9Z0 273 aa8.22□□□□□ -1.09
SMG6-218ENST00000575454 HLA-DQA1Q5Y7H0 255 aa8.22□□□□□ -1.09
SMG6-218ENST00000575454 ENPP6Q6UWR7 440 aa8.22□□□□□ -1.09
SMG6-218ENST00000575454 VN1R5Q7Z5H4 357 aa8.22□□□□□ -1.09
SMG6-218ENST00000575454 LUZP2Q86TE4 346 aa8.22□□□□□ -1.09
SMG6-218ENST00000575454 TMEM139Q8IV31 216 aa8.22□□□□□ -1.09
SMG6-218ENST00000575454 OR4N5Q8IXE1 308 aa8.22□□□□□ -1.09
SMG6-218ENST00000575454 AGGF1Q8N302 714 aaeCLIP8.22□□□□□ -1.09
SMG6-218ENST00000575454 VWA5B2Q8N398 1253 aa8.22□□□□□ -1.09
SMG6-218ENST00000575454 ZNF441Q8N8Z8 693 aa8.22□□□□□ -1.09
SMG6-218ENST00000575454 C9orf106Q8NAJ2 232 aa8.22□□□□□ -1.09
SMG6-218ENST00000575454 SPPL2AQ8TCT8 520 aa8.22□□□□□ -1.09
SMG6-218ENST00000575454 GRK7Q8WTQ7 553 aa8.22□□□□□ -1.09
SMG6-218ENST00000575454 RIT1Q92963 219 aa8.22□□□□□ -1.09
SMG6-218ENST00000575454 PPWD1Q96BP3 646 aaKnown RBP8.22□□□□□ -1.09
SMG6-218ENST00000575454 PERPQ96FX8 193 aa8.22□□□□□ -1.09
SMG6-218ENST00000575454 TMEM41AQ96HV5 264 aa8.22□□□□□ -1.09
SMG6-218ENST00000575454 RILPQ96NA2 401 aa8.22□□□□□ -1.09
SMG6-218ENST00000575454 GNRHR2Q96P88 292 aa8.22□□□□□ -1.09
SMG6-218ENST00000575454 NAP1L3Q99457 506 aaPredicted RBP8.22□□□□□ -1.09
SMG6-218ENST00000575454 MAPKAP1Q9BPZ7 522 aa8.22□□□□□ -1.09
SMG6-218ENST00000575454 GSX2Q9BZM3 304 aa8.22□□□□□ -1.09
SMG6-218ENST00000575454 PHF11Q9UIL8 331 aa8.22□□□□□ -1.09
SMG6-218ENST00000575454 PACSIN3Q9UKS6 424 aa8.22□□□□□ -1.09
SMG6-218ENST00000575454 ZNF490Q9ULM2 529 aaPredicted RBP8.22□□□□□ -1.09
SMG6-218ENST00000575454 SLC6A5Q9Y345 797 aa8.22□□□□□ -1.09
SMG6-218ENST00000575454 TESMINQ9Y4I5 508 aa8.22□□□□□ -1.09
SMG6-218ENST00000575454 C2orf92A0A1B0GVN3 265 aa8.21□□□□□ -1.1
SMG6-218ENST00000575454 TRIM64A6NGJ6 449 aa8.21□□□□□ -1.1
SMG6-218ENST00000575454 TRIM64BA6NI03 449 aa8.21□□□□□ -1.1
SMG6-218ENST00000575454 RNF212BA8MTL3 300 aa8.21□□□□□ -1.1
SMG6-218ENST00000575454 H0Y3Z8 333 aa8.21□□□□□ -1.1
SMG6-218ENST00000575454 MSTNO14793 375 aa8.21□□□□□ -1.1
SMG6-218ENST00000575454 STK16O75716 305 aa8.21□□□□□ -1.1
SMG6-218ENST00000575454 CNOT4O95628 575 aaKnown RBP8.21□□□□□ -1.1
SMG6-218ENST00000575454 GPR75O95800 540 aa8.21□□□□□ -1.1
SMG6-218ENST00000575454 CRHP06850 196 aa8.21□□□□□ -1.1
SMG6-218ENST00000575454 BUD31P41223 144 aaPredicted RBP8.21□□□□□ -1.1
SMG6-218ENST00000575454 CASP2P42575 452 aa8.21□□□□□ -1.1
SMG6-218ENST00000575454 SSR2P43308 183 aa8.21□□□□□ -1.1
SMG6-218ENST00000575454 SLC37A1P57057 533 aa8.21□□□□□ -1.1
SMG6-218ENST00000575454 HERVK_113P63132 956 aa8.21□□□□□ -1.1
SMG6-218ENST00000575454 ERVK-8P63133 956 aa8.21□□□□□ -1.1
SMG6-218ENST00000575454 IRF8Q02556 426 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms