RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 A0A0A6YYJ9 748 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 FAM227AF5H4B4 570 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 MID1O15344 667 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 SYPP08247 313 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 RHOQP17081 205 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 CTPS1P17812 591 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 IL1RNP18510 177 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 RPL17P18621 184 aaKnown RBP9.13□□□□□ -0.95
CCDC40-212ENST00000574799 CELP19835 753 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 SDHBP21912 280 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 DRD5P21918 477 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 GDI2P50395 445 aaKnown RBP9.13□□□□□ -0.95
CCDC40-212ENST00000574799 CLCN7P51798 805 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 TAF10Q12962 218 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 OR2G6Q5TZ20 316 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 FRMPD2BQ6IN97 320 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 FUT10Q6P4F1 479 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 KCNJ9Q92806 393 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 RAD9AQ99638 391 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 HTATIP2Q9BUP3 242 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 CDCA4Q9BXL8 241 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 MYO10Q9HD67 2058 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 A0A1B0GW55 424 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 LGALS8O00214 317 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 OR56A5P0C7T3 313 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 DUX4L2P0CJ85 424 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 DUX4L3P0CJ86 424 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 DUX4L4P0CJ87 422 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 DUX4L5P0CJ88 424 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 DUX4L6P0CJ89 424 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 DUX4L7P0CJ90 424 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 CHMP24386 653 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 SUOXP51687 545 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 CCL23P55773 120 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 SHFQ7M4L6 423 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 ATCAYQ86WG3 371 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 IQCF1Q8N6M8 205 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 NFKBIDQ8NI38 313 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 BTN2A2Q8WVV5 523 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 APIPQ96GX9 242 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 ACPTQ9BZG2 426 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 CD244Q9BZW8 370 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 SAP130Q9H0E3 1048 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 MIXL1Q9H2W2 232 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 SDHAF2Q9NX18 166 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 DUX4Q9UBX2 424 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 ACSL5Q9ULC5 683 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 PLCL2Q9UPR0 1127 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 PCDHGB7Q9Y5F8 929 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 A0A0D9SEW6 157 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 SYNDIG1LA6NDD5 238 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 PITPNM1O00562 1244 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 GJB5O95377 273 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 PAHP00439 452 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 ACADMP11310 421 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 SRCP12931 536 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 SDC1P18827 310 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 HOXD9P28356 352 aaPredicted RBP9.12□□□□□ -0.95
CCDC40-212ENST00000574799 HNMTP50135 292 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 ZNF91Q05481 1191 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 ZNF33BQ06732 778 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 SCARB2Q14108 478 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 PCBP2Q15366 365 aaKnown RBP eCLIP9.12□□□□□ -0.955e-7■■■■■ 29.1
CCDC40-212ENST00000574799 DCST1Q5T197 706 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 GCNT6Q5T4J0 391 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 SLC8B1Q6J4K2 584 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 CALHM3Q86XJ0 350 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 TOMM5Q8N4H5 51 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 CELF5Q8N6W0 485 aaKnown RBP9.12□□□□□ -0.95
CCDC40-212ENST00000574799 CLDN22Q8N7P3 220 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 GPR150Q8NGU9 434 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 OR5AK3PQ8NH89 298 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 CSGALNACT1Q8TDX6 532 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 REPS1Q96D71 796 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 WDFY2Q96P53 400 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 TRIB3Q96RU7 358 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 CACNG6Q9BXT2 260 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 SLC29A3Q9BZD2 475 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.12□□□□□ -0.95
CCDC40-212ENST00000574799 ATG10Q9H0Y0 220 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 GPBP1L1Q9HC44 474 aaPredicted RBP9.12□□□□□ -0.95
CCDC40-212ENST00000574799 HPF1Q9NWY4 346 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 TNFRSF10DQ9UBN6 386 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 PCDHGA2Q9Y5H1 932 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 SNX11Q9Y5W9 270 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 NINQ8N4C6 2090 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 C2orf92A0A1B0GVN3 265 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 TRBC2A0A5B9 178 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 ARHGEF33A8MVX0 844 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 C1QCP02747 245 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 TPOP07202 933 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 ACSM4P0C7M7 580 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 ZNF806P0C7X5 589 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 EBLN1P0CF75 366 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 PPIBP23284 216 aaKnown RBP9.12□□□□□ -0.95
CCDC40-212ENST00000574799 PTGER3P43115 390 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 CBX5P45973 191 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 RGRP47804 291 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 RPIAP49247 311 aa9.12□□□□□ -0.95
CCDC40-212ENST00000574799 MRPL19P49406 292 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms