RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 PLIN5Q00G26 463 aa11.13□□□□□ -0.63
PRPF8-208ENST00000573716 ZNF267Q14586 743 aaPredicted RBP11.13□□□□□ -0.63
PRPF8-208ENST00000573716 CRYMQ14894 314 aa11.13□□□□□ -0.63
PRPF8-208ENST00000573716 RNF111Q6ZNA4 994 aa11.13□□□□□ -0.63
PRPF8-208ENST00000573716 DGAT2L6Q6ZPD8 337 aa11.13□□□□□ -0.63
PRPF8-208ENST00000573716 VN1R5Q7Z5H4 357 aa11.13□□□□□ -0.63
PRPF8-208ENST00000573716 YRDCQ86U90 279 aaKnown RBP11.13□□□□□ -0.63
PRPF8-208ENST00000573716 PACS2Q86VP3 889 aa11.13□□□□□ -0.63
PRPF8-208ENST00000573716 ZNF441Q8N8Z8 693 aa11.13□□□□□ -0.63
PRPF8-208ENST00000573716 SNX31Q8N9S9 440 aa11.13□□□□□ -0.63
PRPF8-208ENST00000573716 MCUQ8NE86 351 aa11.13□□□□□ -0.63
PRPF8-208ENST00000573716 KCNC2Q96PR1 638 aa11.13□□□□□ -0.63
PRPF8-208ENST00000573716 SECISBP2Q96T21 854 aaKnown RBP11.13□□□□□ -0.63
PRPF8-208ENST00000573716 KRT12Q99456 494 aa11.13□□□□□ -0.63
PRPF8-208ENST00000573716 TUBA1CQ9BQE3 449 aa11.13□□□□□ -0.63
PRPF8-208ENST00000573716 ERVK-6Q9BXR3 956 aa11.13□□□□□ -0.63
PRPF8-208ENST00000573716 WWTR1Q9GZV5 400 aa11.13□□□□□ -0.63
PRPF8-208ENST00000573716 PRDM7Q9NQW5 492 aa11.13□□□□□ -0.63
PRPF8-208ENST00000573716 TEX10Q9NXF1 929 aaPredicted RBP11.13□□□□□ -0.63
PRPF8-208ENST00000573716 ERVK-19Q9WJR5 959 aa11.13□□□□□ -0.63
PRPF8-208ENST00000573716 C15orf41Q9Y2V0 281 aa11.13□□□□□ -0.63
PRPF8-208ENST00000573716 NPFFR2Q9Y5X5 522 aa11.13□□□□□ -0.63
PRPF8-208ENST00000573716 MED12LQ86YW9 2145 aa11.12□□□□□ -0.63
PRPF8-208ENST00000573716 GNB5O14775 395 aa11.12□□□□□ -0.63
PRPF8-208ENST00000573716 SIAH2O43255 324 aa11.12□□□□□ -0.63
PRPF8-208ENST00000573716 CTIFO43310 598 aaKnown RBP11.12□□□□□ -0.63
PRPF8-208ENST00000573716 SMNDC1O75940 238 aaKnown RBP eCLIP11.12□□□□□ -0.636e-8■□□□□ 10
PRPF8-208ENST00000573716 TBX6O95947 436 aaPredicted RBP11.12□□□□□ -0.63
PRPF8-208ENST00000573716 IGKV3-11P04433 115 aa11.12□□□□□ -0.63
PRPF8-208ENST00000573716 HPNP05981 417 aa11.12□□□□□ -0.63
PRPF8-208ENST00000573716 PGAM1P18669 254 aa11.12□□□□□ -0.63
PRPF8-208ENST00000573716 ATP5A1P25705 553 aaKnown RBP11.12□□□□□ -0.63
PRPF8-208ENST00000573716 GSTM2P28161 218 aa11.12□□□□□ -0.63
PRPF8-208ENST00000573716 GCKP35557 465 aa11.12□□□□□ -0.63
PRPF8-208ENST00000573716 SOX18P35713 384 aa11.12□□□□□ -0.63
PRPF8-208ENST00000573716 NAGLUP54802 743 aa11.12□□□□□ -0.63
PRPF8-208ENST00000573716 NR1H2P55055 460 aa11.12□□□□□ -0.63
PRPF8-208ENST00000573716 NTRK2Q16620 822 aa11.12□□□□□ -0.63
PRPF8-208ENST00000573716 PPP1R3AQ16821 1122 aa11.12□□□□□ -0.63
PRPF8-208ENST00000573716 ADPRMQ3LIE5 342 aa11.12□□□□□ -0.63
PRPF8-208ENST00000573716 TBCELQ5QJ74 424 aa11.12□□□□□ -0.63
PRPF8-208ENST00000573716 ZNF793Q6ZN11 406 aa11.12□□□□□ -0.63
PRPF8-208ENST00000573716 TAGAPQ8N103 731 aa11.12□□□□□ -0.63
PRPF8-208ENST00000573716 RNF10Q8N5U6 811 aaKnown RBP11.12□□□□□ -0.63
PRPF8-208ENST00000573716 ACOT4Q8N9L9 421 aa11.12□□□□□ -0.63
PRPF8-208ENST00000573716 MAPK1IP1LQ8NDC0 245 aa11.12□□□□□ -0.63
PRPF8-208ENST00000573716 ZC3HAV1LQ96H79 300 aaKnown RBP11.12□□□□□ -0.63
PRPF8-208ENST00000573716 FBXL20Q96IG2 436 aa11.12□□□□□ -0.63
PRPF8-208ENST00000573716 SIGLEC10Q96LC7 697 aa11.12□□□□□ -0.63
PRPF8-208ENST00000573716 WFIKKN1Q96NZ8 548 aa11.12□□□□□ -0.63
PRPF8-208ENST00000573716 FAM111AQ96PZ2 611 aa11.12□□□□□ -0.63
PRPF8-208ENST00000573716 TM9SF2Q99805 663 aa11.12□□□□□ -0.63
PRPF8-208ENST00000573716 PIGQQ9BRB3 760 aa11.12□□□□□ -0.63
PRPF8-208ENST00000573716 MED18Q9BUE0 208 aa11.12□□□□□ -0.63
PRPF8-208ENST00000573716 ROGDIQ9GZN7 287 aa11.12□□□□□ -0.63
PRPF8-208ENST00000573716 ZNF226Q9NYT6 803 aa11.12□□□□□ -0.63
PRPF8-208ENST00000573716 VWA7Q9Y334 891 aa11.12□□□□□ -0.63
PRPF8-208ENST00000573716 CAPN14A8MX76 684 aa11.11□□□□□ -0.63
PRPF8-208ENST00000573716 DEFB108AA8MXU0 73 aa11.11□□□□□ -0.63
PRPF8-208ENST00000573716 SAP18O00422 153 aaKnown RBP11.11□□□□□ -0.63
PRPF8-208ENST00000573716 OR10H2O60403 315 aa11.11□□□□□ -0.63
PRPF8-208ENST00000573716 BANF1O75531 89 aa11.11□□□□□ -0.63
PRPF8-208ENST00000573716 IFNA2P01563 188 aa11.11□□□□□ -0.63
PRPF8-208ENST00000573716 SSR2P43308 183 aa11.11□□□□□ -0.63
PRPF8-208ENST00000573716 HNMTP50135 292 aa11.11□□□□□ -0.63
PRPF8-208ENST00000573716 DMTNQ08495 405 aa11.11□□□□□ -0.63
PRPF8-208ENST00000573716 FAM27E3Q08E93 113 aa11.11□□□□□ -0.63
PRPF8-208ENST00000573716 RPS6KA2Q15349 733 aa11.11□□□□□ -0.63
PRPF8-208ENST00000573716 AP5B1Q2VPB7 878 aa11.11□□□□□ -0.63
PRPF8-208ENST00000573716 KBTBD12Q3ZCT8 623 aa11.11□□□□□ -0.63
PRPF8-208ENST00000573716 FBXO48Q5FWF7 155 aa11.11□□□□□ -0.63
PRPF8-208ENST00000573716 C10orf62Q5T681 223 aaPredicted RBP11.11□□□□□ -0.63
PRPF8-208ENST00000573716 HLA-DQA1Q5Y7H0 255 aa11.11□□□□□ -0.63
PRPF8-208ENST00000573716 FAM45BPQ6NSW5 357 aa11.11□□□□□ -0.63
PRPF8-208ENST00000573716 C20orf204Q6ZNR8 217 aa11.11□□□□□ -0.63
PRPF8-208ENST00000573716 PRR22Q8IZ63 422 aa11.11□□□□□ -0.63
PRPF8-208ENST00000573716 PPP1R14CQ8TAE6 165 aa11.11□□□□□ -0.63
PRPF8-208ENST00000573716 FAM45AQ8TCE6 357 aa11.11□□□□□ -0.63
PRPF8-208ENST00000573716 TMEM158Q8WZ71 300 aa11.11□□□□□ -0.63
PRPF8-208ENST00000573716 TBCDQ9BTW9 1192 aa11.11□□□□□ -0.63
PRPF8-208ENST00000573716 UBQLN3Q9H347 655 aa11.11□□□□□ -0.63
PRPF8-208ENST00000573716 PIGMQ9H3S5 423 aa11.11□□□□□ -0.63
PRPF8-208ENST00000573716 NT5DC2Q9H857 520 aa11.11□□□□□ -0.63
PRPF8-208ENST00000573716 PACSIN3Q9UKS6 424 aa11.11□□□□□ -0.63
PRPF8-208ENST00000573716 WIF1Q9Y5W5 379 aa11.11□□□□□ -0.63
PRPF8-208ENST00000573716 ANKRD33BA6NCL7 494 aa11.1□□□□□ -0.63
PRPF8-208ENST00000573716 PRKRAO75569 313 aaKnown RBP11.1□□□□□ -0.63
PRPF8-208ENST00000573716 RCBTB2O95199 551 aa11.1□□□□□ -0.63
PRPF8-208ENST00000573716 SNX4O95219 450 aa11.1□□□□□ -0.63
PRPF8-208ENST00000573716 PCNAP12004 261 aa11.1□□□□□ -0.63
PRPF8-208ENST00000573716 ALOX15P16050 662 aaPredicted RBP11.1□□□□□ -0.63
PRPF8-208ENST00000573716 CXCR5P32302 372 aa11.1□□□□□ -0.63
PRPF8-208ENST00000573716 MAGEA3P43357 314 aa11.1□□□□□ -0.63
PRPF8-208ENST00000573716 ZNF75DP51815 510 aa11.1□□□□□ -0.63
PRPF8-208ENST00000573716 ZNF460Q14592 562 aa11.1□□□□□ -0.63
PRPF8-208ENST00000573716 SETDB1Q15047 1291 aa11.1□□□□□ -0.63
PRPF8-208ENST00000573716 EBPQ15125 230 aaKnown RBP11.1□□□□□ -0.63
PRPF8-208ENST00000573716 TSNQ15631 228 aaKnown RBP11.1□□□□□ -0.63
PRPF8-208ENST00000573716 NHSL2Q5HYW2 709 aa11.1□□□□□ -0.63
PRPF8-208ENST00000573716 PODNL1Q6PEZ8 512 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms