RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 OR51Q1Q8NH59 317 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 PHF12Q96QT6 1004 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 MAPKAP1Q9BPZ7 522 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 TAPBPLQ9BX59 468 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 OR51I1Q9H343 314 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 S100A14Q9HCY8 104 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 EXOSC4Q9NPD3 245 aaKnown RBP9.58□□□□□ -0.88
SMG6-213ENST00000573166 PADI1Q9ULC6 663 aa9.58□□□□□ -0.88
SMG6-213ENST00000573166 CUL9Q8IWT3 2517 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 GABRR3A8MPY1 467 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 TP53I11O14683 189 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 SPINT1O43278 529 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 NUDT21O43809 227 aaKnown RBP9.57□□□□□ -0.88
SMG6-213ENST00000573166 CKMT2P17540 419 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 SLC7A1P30825 629 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 MC3RP41968 323 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 DCDP81605 110 aaKnown RBP9.57□□□□□ -0.88
SMG6-213ENST00000573166 DMPKQ09013 629 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 EPS8Q12929 822 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 TTC23Q5W5X9 447 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 PMS2CLQ68D20 193 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 FIGNL1Q6PIW4 674 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 GATSQ8NAP1 163 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 OR9A2Q8NGT5 310 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 CANT1Q8WVQ1 401 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 SOX17Q9H6I2 414 aaPredicted RBP9.57□□□□□ -0.88
SMG6-213ENST00000573166 KCNK13Q9HB14 408 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 PAIP2BQ9ULR5 123 aaKnown RBP9.57□□□□□ -0.88
SMG6-213ENST00000573166 LRRC42Q9Y546 428 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 CSNK1G3Q9Y6M4 447 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 ASCC3Q8N3C0 2202 aaKnown RBP9.57□□□□□ -0.88
SMG6-213ENST00000573166 LILRA5A6NI73 299 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 ZNF749O43361 778 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 GPR75O95800 540 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 HLA-DQA2P01906 255 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 SERPINB10P48595 397 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 TRA2BP62995 288 aaKnown RBP9.57□□□□□ -0.88
SMG6-213ENST00000573166 ADRM1Q16186 407 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 GTDC1Q4AE62 458 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 GUSBP11Q6P575 273 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 RAB11FIP2Q7L804 512 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 MCEMP1Q8IX19 187 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 SCAIQ8N9R8 606 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 OR8J3Q8NGG0 315 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 C1orf21Q9H246 121 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 EHD3Q9NZN3 535 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 MBD1Q9UIS9 605 aaPredicted RBP9.57□□□□□ -0.88
SMG6-213ENST00000573166 LIPT1Q9Y234 373 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 GPR45Q9Y5Y3 372 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 AQP12BA6NM10 295 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 AGAP14A8MT82 685 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 FOXD2O60548 495 aaPredicted RBP9.57□□□□□ -0.88
SMG6-213ENST00000573166 GADD45GO95257 159 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 RAP2AP10114 183 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 ETFAP13804 333 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 AQP4P55087 323 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 CDC42P60953 191 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 GANABQ14697 944 aaKnown RBP9.57□□□□□ -0.88
SMG6-213ENST00000573166 ABHD17CQ6PCB6 329 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 WDR5BQ86VZ2 330 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 RAB43Q86YS6 212 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 AQP12AQ8IXF9 295 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 POMGNT2Q8NAT1 580 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 TEX47Q8TBZ9 253 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 MPP4Q96JB8 637 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 DPH2Q9BQC3 489 aaPredicted RBP9.57□□□□□ -0.88
SMG6-213ENST00000573166 SDHAF3Q9NRP4 125 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 GMPPBQ9Y5P6 360 aa9.57□□□□□ -0.88
SMG6-213ENST00000573166 M0R3G1 203 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 PPM1DO15297 605 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 NME6O75414 186 aaPredicted RBP9.56□□□□□ -0.88
SMG6-213ENST00000573166 TRAPPC6AO75865 159 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 AIFM1O95831 613 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 GPR3P46089 330 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 TRAP1Q12931 704 aaKnown RBP9.56□□□□□ -0.88
SMG6-213ENST00000573166 GARNL3Q5VVW2 1013 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 TCEAL6Q6IPX3 200 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 HMGN2P46Q86SG4 172 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 ZNF605Q86T29 641 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 HIPK1Q86Z02 1210 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 SLC15A3Q8IY34 581 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 KBTBD2Q8IY47 623 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 STX19Q8N4C7 294 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 BAHD1Q8TBE0 780 aaPredicted RBP9.56□□□□□ -0.88
SMG6-213ENST00000573166 TCEAL3Q969E4 200 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 ACTR3BQ9P1U1 418 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 ADAM29Q9UKF5 820 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 ERVK-19Q9WJR5 959 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 PDCD11Q14690 1871 aaKnown RBP9.56□□□□□ -0.88
SMG6-213ENST00000573166 ELOA3DA6NLF2 546 aaPredicted RBP9.56□□□□□ -0.88
SMG6-213ENST00000573166 SCO2O43819 266 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 BRINP1O60477 761 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 CLPTM1O96005 669 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 CD63P08962 238 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 CYP4B1P13584 511 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 CA5AP35218 305 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 HOXD12P35452 270 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 FOLH1Q04609 750 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 VMACQ2NL98 169 aa9.56□□□□□ -0.88
SMG6-213ENST00000573166 ELOA3BQ3SY89 546 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms