RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 CDC42P60953 191 aa15.4■□□□□ 0.06
POLR2A-201ENST00000572844 STXBP1P61764 594 aaKnown RBP15.4■□□□□ 0.06
POLR2A-201ENST00000572844 PPP2CBP62714 309 aa15.4■□□□□ 0.06
POLR2A-201ENST00000572844 PPP2CAP67775 309 aa15.4■□□□□ 0.06
POLR2A-201ENST00000572844 TGM3Q08188 693 aa15.4■□□□□ 0.06
POLR2A-201ENST00000572844 GNA13Q14344 377 aa15.4■□□□□ 0.06
POLR2A-201ENST00000572844 GANABQ14697 944 aaKnown RBP15.4■□□□□ 0.06
POLR2A-201ENST00000572844 NFATC4Q14934 902 aa15.4■□□□□ 0.06
POLR2A-201ENST00000572844 CEBPEQ15744 281 aa15.4■□□□□ 0.06
POLR2A-201ENST00000572844 KLHL17Q6TDP4 642 aa15.4■□□□□ 0.06
POLR2A-201ENST00000572844 GGHQ92820 318 aa15.4■□□□□ 0.06
POLR2A-201ENST00000572844 VMP1Q96GC9 406 aa15.4■□□□□ 0.06
POLR2A-201ENST00000572844 BBS4Q96RK4 519 aa15.4■□□□□ 0.06
POLR2A-201ENST00000572844 TREX2Q9BQ50 279 aaPredicted RBP15.4■□□□□ 0.06
POLR2A-201ENST00000572844 RSPO3Q9BXY4 272 aaPredicted RBP15.4■□□□□ 0.06
POLR2A-201ENST00000572844 SLC6A17Q9H1V8 727 aa15.4■□□□□ 0.06
POLR2A-201ENST00000572844 FZD3Q9NPG1 666 aa15.4■□□□□ 0.06
POLR2A-201ENST00000572844 ZCCHC3Q9NUD5 404 aaKnown RBP15.4■□□□□ 0.06
POLR2A-201ENST00000572844 LYARQ9NX58 379 aaKnown RBP15.4■□□□□ 0.06
POLR2A-201ENST00000572844 SPHK1Q9NYA1 384 aa15.4■□□□□ 0.06
POLR2A-201ENST00000572844 CES1P1Q9UKY3 287 aa15.4■□□□□ 0.06
POLR2A-201ENST00000572844 A0A0G2JN53 185 aa15.4■□□□□ 0.06
POLR2A-201ENST00000572844 PRAMEF27A3QJZ7 478 aa15.4■□□□□ 0.06
POLR2A-201ENST00000572844 FOXD2O60548 495 aaPredicted RBP15.4■□□□□ 0.06
POLR2A-201ENST00000572844 KLF8O95600 359 aaPredicted RBP15.4■□□□□ 0.06
POLR2A-201ENST00000572844 APBB3O95704 486 aa15.4■□□□□ 0.06
POLR2A-201ENST00000572844 GASTP01350 101 aa15.4■□□□□ 0.06
POLR2A-201ENST00000572844 CHRM5P08912 532 aaPredicted RBP15.4■□□□□ 0.06
POLR2A-201ENST00000572844 OR12D1P0DN82 309 aa15.4■□□□□ 0.06
POLR2A-201ENST00000572844 PTGES3Q15185 160 aaKnown RBP15.4■□□□□ 0.06
POLR2A-201ENST00000572844 AMIGO1Q86WK6 493 aa15.4■□□□□ 0.06
POLR2A-201ENST00000572844 PAQR7Q86WK9 346 aa15.4■□□□□ 0.06
POLR2A-201ENST00000572844 TMEM145Q8NBT3 493 aa15.4■□□□□ 0.06
POLR2A-201ENST00000572844 OR56A1Q8NGH5 318 aa15.4■□□□□ 0.06
POLR2A-201ENST00000572844 OR8K5Q8NH50 307 aa15.4■□□□□ 0.06
POLR2A-201ENST00000572844 FUZQ9BT04 418 aa15.4■□□□□ 0.06
POLR2A-201ENST00000572844 ITPAQ9BY32 194 aa15.4■□□□□ 0.06
POLR2A-201ENST00000572844 IMPAD1Q9NX62 359 aa15.4■□□□□ 0.06
POLR2A-201ENST00000572844 SEC14L3Q9UDX4 400 aa15.4■□□□□ 0.06
POLR2A-201ENST00000572844 EGFP01133 1207 aa15.39■□□□□ 0.05
POLR2A-201ENST00000572844 H1F0P07305 194 aaKnown RBP15.39■□□□□ 0.05
POLR2A-201ENST00000572844 CD72P21854 359 aa15.39■□□□□ 0.05
POLR2A-201ENST00000572844 TGFBR2P37173 567 aa15.39■□□□□ 0.05
POLR2A-201ENST00000572844 IDH2P48735 452 aaKnown RBP15.39■□□□□ 0.05
POLR2A-201ENST00000572844 CRISP3P54108 245 aa15.39■□□□□ 0.05
POLR2A-201ENST00000572844 HTR4Q13639 388 aa15.39■□□□□ 0.05
POLR2A-201ENST00000572844 FRMPD2BQ6IN97 320 aa15.39■□□□□ 0.05
POLR2A-201ENST00000572844 SLC48A1Q6P1K1 146 aa15.39■□□□□ 0.05
POLR2A-201ENST00000572844 TRIM69Q86WT6 500 aa15.39■□□□□ 0.05
POLR2A-201ENST00000572844 SLC44A2Q8IWA5 706 aaPredicted RBP15.39■□□□□ 0.05
POLR2A-201ENST00000572844 SLC38A4Q969I6 547 aa15.39■□□□□ 0.05
POLR2A-201ENST00000572844 SIPA1Q96FS4 1042 aa15.39■□□□□ 0.05
POLR2A-201ENST00000572844 COL21A1Q96P44 957 aa15.39■□□□□ 0.05
POLR2A-201ENST00000572844 BTBD2Q9BX70 525 aa15.39■□□□□ 0.05
POLR2A-201ENST00000572844 NDOR1Q9UHB4 597 aa15.39■□□□□ 0.05
POLR2A-201ENST00000572844 DUSP12Q9UNI6 340 aa15.39■□□□□ 0.05
POLR2A-201ENST00000572844 B3GNT3Q9Y2A9 372 aa15.39■□□□□ 0.05
POLR2A-201ENST00000572844 ATG4BQ9Y4P1 393 aa15.39■□□□□ 0.05
POLR2A-201ENST00000572844 RANBP2P49792 3224 aaKnown RBP15.39■□□□□ 0.05
POLR2A-201ENST00000572844 TRBV4-1A0A0J9YWV2 114 aa15.39■□□□□ 0.05
POLR2A-201ENST00000572844 TNFRSF10CO14798 259 aa15.39■□□□□ 0.05
POLR2A-201ENST00000572844 AXIN1O15169 862 aa15.39■□□□□ 0.05
POLR2A-201ENST00000572844 SLITRK5O94991 958 aa15.39■□□□□ 0.05
POLR2A-201ENST00000572844 FHP07954 510 aa15.39■□□□□ 0.05
POLR2A-201ENST00000572844 NR2F1P10589 423 aa15.39■□□□□ 0.05
POLR2A-201ENST00000572844 CSNK2A2P19784 350 aaPredicted RBP15.39■□□□□ 0.05
POLR2A-201ENST00000572844 CHMP24386 653 aa15.39■□□□□ 0.05
POLR2A-201ENST00000572844 ELAVL4P26378 380 aaKnown RBP15.39■□□□□ 0.05
POLR2A-201ENST00000572844 SLC19A1P41440 591 aa15.39■□□□□ 0.05
POLR2A-201ENST00000572844 MLLT10P55197 1068 aa15.39■□□□□ 0.05
POLR2A-201ENST00000572844 RPS15AP62244 130 aaKnown RBP15.39■□□□□ 0.05
POLR2A-201ENST00000572844 MRPS21P82921 87 aaKnown RBP15.39■□□□□ 0.05
POLR2A-201ENST00000572844 ILKQ13418 452 aa15.39■□□□□ 0.05
POLR2A-201ENST00000572844 SYPL1Q16563 259 aa15.39■□□□□ 0.05
POLR2A-201ENST00000572844 FBXO43Q4G163 708 aa15.39■□□□□ 0.05
POLR2A-201ENST00000572844 DCST1Q5T197 706 aa15.39■□□□□ 0.05
POLR2A-201ENST00000572844 FAM20CQ8IXL6 584 aa15.39■□□□□ 0.05
POLR2A-201ENST00000572844 LINC00471Q8N535 108 aa15.39■□□□□ 0.05
POLR2A-201ENST00000572844 C9orf43Q8TAL5 461 aaPredicted RBP15.39■□□□□ 0.05
POLR2A-201ENST00000572844 SUN3Q8TAQ9 357 aa15.39■□□□□ 0.05
POLR2A-201ENST00000572844 NT5CQ8TCD5 201 aa15.39■□□□□ 0.05
POLR2A-201ENST00000572844 UTP15Q8TED0 518 aaKnown RBP15.39■□□□□ 0.05
POLR2A-201ENST00000572844 LCN9Q8WX39 176 aa15.39■□□□□ 0.05
POLR2A-201ENST00000572844 OR1E3Q8WZA6 343 aa15.39■□□□□ 0.05
POLR2A-201ENST00000572844 GTPBP3Q969Y2 492 aaKnown RBP15.39■□□□□ 0.05
POLR2A-201ENST00000572844 SLC22A18Q96BI1 424 aa15.39■□□□□ 0.05
POLR2A-201ENST00000572844 PLEKHA8Q96JA3 519 aa15.39■□□□□ 0.05
POLR2A-201ENST00000572844 WDR92Q96MX6 357 aa15.39■□□□□ 0.05
POLR2A-201ENST00000572844 UCK2Q9BZX2 261 aa15.39■□□□□ 0.05
POLR2A-201ENST00000572844 CNOT2Q9NZN8 540 aaKnown RBP15.39■□□□□ 0.05
POLR2A-201ENST00000572844 TBC1D29Q9UFV1 150 aa15.39■□□□□ 0.05
POLR2A-201ENST00000572844 APOBEC3BQ9UH17 382 aaKnown RBP15.39■□□□□ 0.05
POLR2A-201ENST00000572844 PNMA8BQ9ULN7 279 aaPredicted RBP15.39■□□□□ 0.05
POLR2A-201ENST00000572844 ENTPD4Q9Y227 616 aa15.39■□□□□ 0.05
POLR2A-201ENST00000572844 LRP4O75096 1905 aa15.38■□□□□ 0.05
POLR2A-201ENST00000572844 POM121BA6NF01 834 aa15.38■□□□□ 0.05
POLR2A-201ENST00000572844 ISM1B1AKI9 464 aa15.38■□□□□ 0.05
POLR2A-201ENST00000572844 PGRMC2O15173 223 aa15.38■□□□□ 0.05
POLR2A-201ENST00000572844 AIFM1O95831 613 aa15.38■□□□□ 0.05
POLR2A-201ENST00000572844 OSMP13725 252 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms