RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 TRA2BP62995 288 aaKnown RBP14.73□□□□□ -0.05
CHD3-215ENST00000572750 KLRB1Q12918 225 aa14.73□□□□□ -0.05
CHD3-215ENST00000572750 ZNF750Q32MQ0 723 aa14.73□□□□□ -0.05
CHD3-215ENST00000572750 NOXRED1Q6NXP6 359 aa14.73□□□□□ -0.05
CHD3-215ENST00000572750 CRLF3Q8IUI8 442 aa14.73□□□□□ -0.05
CHD3-215ENST00000572750 ST13P4Q8IZP2 240 aaPredicted RBP14.73□□□□□ -0.05
CHD3-215ENST00000572750 TMEM132CQ8N3T6 1108 aa14.73□□□□□ -0.05
CHD3-215ENST00000572750 TEX19Q8NA77 164 aa14.73□□□□□ -0.05
CHD3-215ENST00000572750 SLC2A12Q8TD20 617 aa14.73□□□□□ -0.05
CHD3-215ENST00000572750 TM9SF4Q92544 642 aa14.73□□□□□ -0.05
CHD3-215ENST00000572750 DAZLQ92904 295 aaKnown RBP14.73□□□□□ -0.05
CHD3-215ENST00000572750 C19orf60Q96EN9 201 aa14.73□□□□□ -0.05
CHD3-215ENST00000572750 VMP1Q96GC9 406 aa14.73□□□□□ -0.05
CHD3-215ENST00000572750 PPP1R36Q96LQ0 422 aa14.73□□□□□ -0.05
CHD3-215ENST00000572750 C3orf30Q96M34 536 aa14.73□□□□□ -0.05
CHD3-215ENST00000572750 SIRT5Q9NXA8 310 aa14.73□□□□□ -0.05
CHD3-215ENST00000572750 CES1P1Q9UKY3 287 aa14.73□□□□□ -0.05
CHD3-215ENST00000572750 RAP2CQ9Y3L5 183 aa14.73□□□□□ -0.05
CHD3-215ENST00000572750 ICE1Q9Y2F5 2266 aa14.73□□□□□ -0.05
CHD3-215ENST00000572750 NPIPB8E9PQR5 432 aa14.72□□□□□ -0.05
CHD3-215ENST00000572750 ERAL1O75616 437 aaKnown RBP14.72□□□□□ -0.05
CHD3-215ENST00000572750 TACR1P25103 407 aa14.72□□□□□ -0.05
CHD3-215ENST00000572750 GPR143P51810 404 aa14.72□□□□□ -0.05
CHD3-215ENST00000572750 KIAA0040Q15053 153 aa14.72□□□□□ -0.05
CHD3-215ENST00000572750 RFTN2Q52LD8 501 aaPredicted RBP14.72□□□□□ -0.05
CHD3-215ENST00000572750 ABHD17BQ5VST6 288 aa14.72□□□□□ -0.05
CHD3-215ENST00000572750 SLC6A19Q695T7 634 aa14.72□□□□□ -0.05
CHD3-215ENST00000572750 IGFL2Q6UWQ7 119 aa14.72□□□□□ -0.05
CHD3-215ENST00000572750 IGFL3Q6UXB1 125 aa14.72□□□□□ -0.05
CHD3-215ENST00000572750 BEST3Q8N1M1 668 aa14.72□□□□□ -0.05
CHD3-215ENST00000572750 SLC5A8Q8N695 610 aa14.72□□□□□ -0.05
CHD3-215ENST00000572750 OR4K14Q8NGD5 310 aa14.72□□□□□ -0.05
CHD3-215ENST00000572750 THAP3Q8WTV1 239 aaPredicted RBP14.72□□□□□ -0.05
CHD3-215ENST00000572750 RBM18Q96H35 190 aaKnown RBP14.72□□□□□ -0.05
CHD3-215ENST00000572750 ILKAPQ9H0C8 392 aaPredicted RBP14.72□□□□□ -0.05
CHD3-215ENST00000572750 MYNNQ9NPC7 610 aa14.72□□□□□ -0.05
CHD3-215ENST00000572750 PLA2G3Q9NZ20 509 aa14.72□□□□□ -0.05
CHD3-215ENST00000572750 TEKT2Q9UIF3 430 aa14.72□□□□□ -0.05
CHD3-215ENST00000572750 PPIEQ9UNP9 301 aaKnown RBP14.72□□□□□ -0.05
CHD3-215ENST00000572750 OTOGQ6ZRI0 2925 aa14.72□□□□□ -0.05
CHD3-215ENST00000572750 PRKNO60260 465 aaPredicted RBP14.71□□□□□ -0.05
CHD3-215ENST00000572750 SNNO75324 88 aaPredicted RBP14.71□□□□□ -0.05
CHD3-215ENST00000572750 SLC35E2P0CK97 266 aa14.71□□□□□ -0.05
CHD3-215ENST00000572750 CPMP14384 443 aa14.71□□□□□ -0.05
CHD3-215ENST00000572750 SDC1P18827 310 aa14.71□□□□□ -0.05
CHD3-215ENST00000572750 FEN1P39748 380 aaKnown RBP14.71□□□□□ -0.05
CHD3-215ENST00000572750 CLCN2P51788 898 aa14.71□□□□□ -0.05
CHD3-215ENST00000572750 XKP51811 444 aa14.71□□□□□ -0.05
CHD3-215ENST00000572750 ERVK-8P63133 956 aa14.71□□□□□ -0.05
CHD3-215ENST00000572750 ARG2P78540 354 aa14.71□□□□□ -0.05
CHD3-215ENST00000572750 DUSP2Q05923 314 aa14.71□□□□□ -0.05
CHD3-215ENST00000572750 ACER2Q5QJU3 275 aa14.71□□□□□ -0.05
CHD3-215ENST00000572750 H3F3CQ6NXT2 135 aa14.71□□□□□ -0.05
CHD3-215ENST00000572750 HPS6Q86YV9 775 aa14.71□□□□□ -0.05
CHD3-215ENST00000572750 ZADH2Q8N4Q0 377 aa14.71□□□□□ -0.05
CHD3-215ENST00000572750 MORN4Q8NDC4 146 aa14.71□□□□□ -0.05
CHD3-215ENST00000572750 OR1N1Q8NGS0 311 aa14.71□□□□□ -0.05
CHD3-215ENST00000572750 CLHC1Q8NHS4 586 aa14.71□□□□□ -0.05
CHD3-215ENST00000572750 FAM76AQ8TAV0 307 aa14.71□□□□□ -0.05
CHD3-215ENST00000572750 RIT1Q92963 219 aa14.71□□□□□ -0.05
CHD3-215ENST00000572750 EXOSC8Q96B26 276 aaKnown RBP14.71□□□□□ -0.05
CHD3-215ENST00000572750 FCRL1Q96LA6 429 aa14.71□□□□□ -0.05
CHD3-215ENST00000572750 PELOQ9BRX2 385 aaKnown RBP14.71□□□□□ -0.05
CHD3-215ENST00000572750 C1orf50Q9BV19 199 aa14.71□□□□□ -0.05
CHD3-215ENST00000572750 CNPPD1Q9BV87 410 aa14.71□□□□□ -0.05
CHD3-215ENST00000572750 DEFB126Q9BYW3 111 aa14.71□□□□□ -0.05
CHD3-215ENST00000572750 PNPOQ9NVS9 261 aa14.71□□□□□ -0.05
CHD3-215ENST00000572750 ANKRD10Q9NXR5 420 aa14.71□□□□□ -0.05
CHD3-215ENST00000572750 COPS7AQ9UBW8 275 aa14.71□□□□□ -0.05
CHD3-215ENST00000572750 MARCOQ9UEW3 520 aaPredicted RBP14.71□□□□□ -0.05
CHD3-215ENST00000572750 HAO1Q9UJM8 370 aa14.71□□□□□ -0.05
CHD3-215ENST00000572750 UTS2RQ9UKP6 389 aa14.71□□□□□ -0.05
CHD3-215ENST00000572750 ERVK-19Q9WJR5 959 aa14.71□□□□□ -0.05
CHD3-215ENST00000572750 C2CD3Q4AC94 2353 aa14.7□□□□□ -0.06
CHD3-215ENST00000572750 CROCCQ5TZA2 2017 aa14.7□□□□□ -0.06
CHD3-215ENST00000572750 DYRK3O43781 588 aa14.7□□□□□ -0.06
CHD3-215ENST00000572750 PEX11AO75192 247 aa14.7□□□□□ -0.06
CHD3-215ENST00000572750 SNUPNO95149 360 aaKnown RBP14.7□□□□□ -0.06
CHD3-215ENST00000572750 WDPCPO95876 746 aa14.7□□□□□ -0.06
CHD3-215ENST00000572750 GSTM5P46439 218 aa14.7□□□□□ -0.06
CHD3-215ENST00000572750 RPL14P50914 215 aaKnown RBP14.7□□□□□ -0.06
CHD3-215ENST00000572750 HK2P52789 917 aa14.7□□□□□ -0.06
CHD3-215ENST00000572750 C2orf80Q0P641 193 aa14.7□□□□□ -0.06
CHD3-215ENST00000572750 HEPACAMQ14CZ8 416 aa14.7□□□□□ -0.06
CHD3-215ENST00000572750 IGFBP7Q16270 282 aa14.7□□□□□ -0.06
CHD3-215ENST00000572750 MEP1AQ16819 746 aa14.7□□□□□ -0.06
CHD3-215ENST00000572750 SPRED3Q2MJR0 410 aa14.7□□□□□ -0.06
CHD3-215ENST00000572750 ATP6AP1LQ52LC2 224 aa14.7□□□□□ -0.06
CHD3-215ENST00000572750 FAM71E1Q6IPT2 247 aa14.7□□□□□ -0.06
CHD3-215ENST00000572750 C16orf47Q6ZP98 133 aaPredicted RBP14.7□□□□□ -0.06
CHD3-215ENST00000572750 GALNT12Q8IXK2 581 aa14.7□□□□□ -0.06
CHD3-215ENST00000572750 Q8NA96 180 aa14.7□□□□□ -0.06
CHD3-215ENST00000572750 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.7□□□□□ -0.06
CHD3-215ENST00000572750 RAB3IL1Q8TBN0 382 aa14.7□□□□□ -0.06
CHD3-215ENST00000572750 ZNF721Q8TF20 911 aa14.7□□□□□ -0.06
CHD3-215ENST00000572750 GFM2Q969S9 779 aaKnown RBP14.7□□□□□ -0.06
CHD3-215ENST00000572750 CNRIP1Q96F85 164 aaPredicted RBP14.7□□□□□ -0.06
CHD3-215ENST00000572750 FBXL20Q96IG2 436 aa14.7□□□□□ -0.06
CHD3-215ENST00000572750 METTL2AQ96IZ6 378 aaKnown RBP14.7□□□□□ -0.06
CHD3-215ENST00000572750 EGLN2Q96KS0 407 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms