RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 SLC22A16Q86VW1 577 aa16.69■□□□□ 0.26
CHD3-214ENST00000572579 ZNF441Q8N8Z8 693 aa16.69■□□□□ 0.26
CHD3-214ENST00000572579 OR10G3Q8NGC4 313 aa16.69■□□□□ 0.26
CHD3-214ENST00000572579 PAQR8Q8TEZ7 354 aa16.69■□□□□ 0.26
CHD3-214ENST00000572579 CA5BP1Q8WTZ4 195 aa16.69■□□□□ 0.26
CHD3-214ENST00000572579 DCAKDQ8WVC6 231 aa16.69■□□□□ 0.26
CHD3-214ENST00000572579 CNPPD1Q9BV87 410 aa16.69■□□□□ 0.26
CHD3-214ENST00000572579 TP63Q9H3D4 680 aaPredicted RBP16.69■□□□□ 0.26
CHD3-214ENST00000572579 PRM3Q9NNZ6 103 aa16.69■□□□□ 0.26
CHD3-214ENST00000572579 SPRR3Q9UBC9 169 aa16.69■□□□□ 0.26
CHD3-214ENST00000572579 COPS7AQ9UBW8 275 aa16.69■□□□□ 0.26
CHD3-214ENST00000572579 ZNF225Q9UK10 706 aa16.69■□□□□ 0.26
CHD3-214ENST00000572579 PCTPQ9UKL6 214 aa16.69■□□□□ 0.26
CHD3-214ENST00000572579 URI1O94763 535 aaPredicted RBP16.68■□□□□ 0.26
CHD3-214ENST00000572579 LRATO95237 230 aa16.68■□□□□ 0.26
CHD3-214ENST00000572579 CLDN9O95484 217 aa16.68■□□□□ 0.26
CHD3-214ENST00000572579 COX7A2P14406 83 aa16.68■□□□□ 0.26
CHD3-214ENST00000572579 SSTR4P31391 388 aa16.68■□□□□ 0.26
CHD3-214ENST00000572579 PLIN5Q00G26 463 aa16.68■□□□□ 0.26
CHD3-214ENST00000572579 CKAP4Q07065 602 aaKnown RBP16.68■□□□□ 0.26
CHD3-214ENST00000572579 EBPQ15125 230 aaKnown RBP16.68■□□□□ 0.26
CHD3-214ENST00000572579 SPRED3Q2MJR0 410 aa16.68■□□□□ 0.26
CHD3-214ENST00000572579 NDUFAF5Q5TEU4 345 aa16.68■□□□□ 0.26
CHD3-214ENST00000572579 PRAMEF20Q5VT98 475 aa16.68■□□□□ 0.26
CHD3-214ENST00000572579 METTL2BQ6P1Q9 378 aaKnown RBP16.68■□□□□ 0.26
CHD3-214ENST00000572579 GK5Q6ZS86 529 aa16.68■□□□□ 0.26
CHD3-214ENST00000572579 MMP21Q8N119 569 aa16.68■□□□□ 0.26
CHD3-214ENST00000572579 FAM109AQ8N4B1 249 aa16.68■□□□□ 0.26
CHD3-214ENST00000572579 UHMK1Q8TAS1 419 aaKnown RBP16.68■□□□□ 0.26
CHD3-214ENST00000572579 RIT1Q92963 219 aa16.68■□□□□ 0.26
CHD3-214ENST00000572579 SPACA9Q96E40 222 aaPredicted RBP16.68■□□□□ 0.26
CHD3-214ENST00000572579 C16orf45Q96MC5 204 aaPredicted RBP16.68■□□□□ 0.26
CHD3-214ENST00000572579 SMC6Q96SB8 1091 aa16.68■□□□□ 0.26
CHD3-214ENST00000572579 NTMT1Q9BV86 223 aa16.68■□□□□ 0.26
CHD3-214ENST00000572579 WWTR1Q9GZV5 400 aa16.68■□□□□ 0.26
CHD3-214ENST00000572579 FARSBQ9NSD9 589 aaKnown RBP16.68■□□□□ 0.26
CHD3-214ENST00000572579 XPR1Q9UBH6 696 aa16.68■□□□□ 0.26
CHD3-214ENST00000572579 CNOT11Q9UKZ1 510 aaKnown RBP16.68■□□□□ 0.26
CHD3-214ENST00000572579 TNPO3Q9Y5L0 923 aaKnown RBP16.68■□□□□ 0.26
CHD3-214ENST00000572579 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.68■□□□□ 0.26
CHD3-214ENST00000572579 P04436 131 aa16.67■□□□□ 0.26
CHD3-214ENST00000572579 SLC35E2P0CK97 266 aa16.67■□□□□ 0.26
CHD3-214ENST00000572579 GLI4P10075 376 aa16.67■□□□□ 0.26
CHD3-214ENST00000572579 NR2F6P10588 404 aa16.67■□□□□ 0.26
CHD3-214ENST00000572579 S1PR1P21453 382 aa16.67■□□□□ 0.26
CHD3-214ENST00000572579 TLX1P31314 330 aaPredicted RBP16.67■□□□□ 0.26
CHD3-214ENST00000572579 BIKQ13323 160 aa16.67■□□□□ 0.26
CHD3-214ENST00000572579 SLC22A10Q63ZE4 541 aa16.67■□□□□ 0.26
CHD3-214ENST00000572579 TMEM211Q6ICI0 200 aa16.67■□□□□ 0.26
CHD3-214ENST00000572579 KLC3Q6P597 504 aa16.67■□□□□ 0.26
CHD3-214ENST00000572579 MEX3BQ6ZN04 569 aaKnown RBP16.67■□□□□ 0.26
CHD3-214ENST00000572579 LIX1LQ8IVB5 337 aa16.67■□□□□ 0.26
CHD3-214ENST00000572579 SLC15A4Q8N697 577 aa16.67■□□□□ 0.26
CHD3-214ENST00000572579 RND1Q92730 232 aa16.67■□□□□ 0.26
CHD3-214ENST00000572579 C14orf79Q96F83 325 aa16.67■□□□□ 0.26
CHD3-214ENST00000572579 PAFAH2Q99487 392 aa16.67■□□□□ 0.26
CHD3-214ENST00000572579 TTYH2Q9BSA4 534 aa16.67■□□□□ 0.26
CHD3-214ENST00000572579 MRPL1Q9BYD6 325 aaKnown RBP16.67■□□□□ 0.26
CHD3-214ENST00000572579 CXorf21Q9HAI6 301 aa16.67■□□□□ 0.26
CHD3-214ENST00000572579 LYARQ9NX58 379 aaKnown RBP16.67■□□□□ 0.26
CHD3-214ENST00000572579 EML6Q6ZMW3 1958 aa16.66■□□□□ 0.26
CHD3-214ENST00000572579 IQANK1A0A1B0GTG1 560 aa16.66■□□□□ 0.26
CHD3-214ENST00000572579 OR14I1A6ND48 311 aa16.66■□□□□ 0.26
CHD3-214ENST00000572579 FAM90A27PA6NNH2 459 aa16.66■□□□□ 0.26
CHD3-214ENST00000572579 STX16-NPEPL1H3BU86 382 aa16.66■□□□□ 0.26
CHD3-214ENST00000572579 ACOT7O00154 380 aa16.66■□□□□ 0.26
CHD3-214ENST00000572579 AQP7O14520 342 aa16.66■□□□□ 0.26
CHD3-214ENST00000572579 STX16O14662 325 aa16.66■□□□□ 0.26
CHD3-214ENST00000572579 KLK1P06870 262 aa16.66■□□□□ 0.26
CHD3-214ENST00000572579 RBP1P09455 135 aa16.66■□□□□ 0.26
CHD3-214ENST00000572579 TSPAN8P19075 237 aa16.66■□□□□ 0.26
CHD3-214ENST00000572579 GCAP28676 217 aa16.66■□□□□ 0.26
CHD3-214ENST00000572579 GALNSP34059 522 aa16.66■□□□□ 0.26
CHD3-214ENST00000572579 PHBP35232 272 aa16.66■□□□□ 0.26
CHD3-214ENST00000572579 ADH7P40394 386 aa16.66■□□□□ 0.26
CHD3-214ENST00000572579 BUD31P41223 144 aaPredicted RBP16.66■□□□□ 0.26
CHD3-214ENST00000572579 CDH13P55290 713 aa16.66■□□□□ 0.26
CHD3-214ENST00000572579 SLC10A1Q14973 349 aa16.66■□□□□ 0.26
CHD3-214ENST00000572579 WHAMMP3Q1A5X7 153 aa16.66■□□□□ 0.26
CHD3-214ENST00000572579 SGO1Q5FBB7 561 aa16.66■□□□□ 0.26
CHD3-214ENST00000572579 FRG2Q64ET8 278 aa16.66■□□□□ 0.26
CHD3-214ENST00000572579 BICRALQ6AI39 1079 aa16.66■□□□□ 0.26
CHD3-214ENST00000572579 LETMD1Q6P1Q0 360 aa16.66■□□□□ 0.26
CHD3-214ENST00000572579 ZNF585AQ6P3V2 769 aa16.66■□□□□ 0.26
CHD3-214ENST00000572579 PAOXQ6QHF9 649 aa16.66■□□□□ 0.26
CHD3-214ENST00000572579 ZNF615Q8N8J6 731 aa16.66■□□□□ 0.26
CHD3-214ENST00000572579 SIMC1Q8NDZ2 872 aa16.66■□□□□ 0.26
CHD3-214ENST00000572579 IFT81Q8WYA0 676 aa16.66■□□□□ 0.26
CHD3-214ENST00000572579 NTNG2Q96CW9 530 aa16.66■□□□□ 0.26
CHD3-214ENST00000572579 REPS1Q96D71 796 aa16.66■□□□□ 0.26
CHD3-214ENST00000572579 FRG2BQ96QU4 278 aa16.66■□□□□ 0.26
CHD3-214ENST00000572579 GAL3ST4Q96RP7 486 aa16.66■□□□□ 0.26
CHD3-214ENST00000572579 CENPKQ9BS16 269 aa16.66■□□□□ 0.26
CHD3-214ENST00000572579 COQ3Q9NZJ6 369 aa16.66■□□□□ 0.26
CHD3-214ENST00000572579 CES1P1Q9UKY3 287 aa16.66■□□□□ 0.26
CHD3-214ENST00000572579 A0A0G2JNJ9 132 aa16.65■□□□□ 0.26
CHD3-214ENST00000572579 SUSD5O60279 629 aa16.65■□□□□ 0.26
CHD3-214ENST00000572579 OR10H2O60403 315 aa16.65■□□□□ 0.26
CHD3-214ENST00000572579 SEMA3DO95025 777 aa16.65■□□□□ 0.26
CHD3-214ENST00000572579 RPS17P08708 135 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms