RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 POLDIP3Q9BY77 421 aaKnown RBP15.98■□□□□ 0.15
LITAF-209ENST00000571688 TVP23BQ9NYZ1 205 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 STON1Q9Y6Q2 735 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 RNF215Q9Y6U7 377 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 PLXNB3Q9ULL4 1909 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 NINQ8N4C6 2090 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.98■□□□□ 0.15
LITAF-209ENST00000571688 MGAT4DA6NG13 374 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 TLX2O43763 284 aaPredicted RBP15.98■□□□□ 0.15
LITAF-209ENST00000571688 C6orf47O95873 294 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 TP53P04637 393 aaPredicted RBP15.98■□□□□ 0.15
LITAF-209ENST00000571688 OPRD1P41143 372 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 NSG1P42857 185 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 ZNF177Q13360 481 aaPredicted RBP15.98■□□□□ 0.15
LITAF-209ENST00000571688 FGFBP1Q14512 234 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 SNAPC1Q16533 368 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 RNF219Q5W0B1 726 aaPredicted RBP15.98■□□□□ 0.15
LITAF-209ENST00000571688 MZT2AQ6P582 158 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 TRIM40Q6P9F5 258 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 KIAA1324Q6UXG2 1013 aaKnown RBP15.98■□□□□ 0.15
LITAF-209ENST00000571688 ADGRF3Q8IZF5 1079 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 ATAD1Q8NBU5 361 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 P2RY13Q9BPV8 354 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 ATG10Q9H0Y0 220 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 UCKL1Q9NWZ5 548 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 UBQLN2Q9UHD9 624 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 ATP6V1HQ9UI12 483 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 ZNF222Q9UK12 451 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 ADAM30Q9UKF2 790 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 ANGPT4Q9Y264 503 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 TSPAN4O14817 238 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 OR10H3O60404 316 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 NCR1O76036 304 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 CLDN7O95471 211 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 MPC2O95563 127 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 HSD3B1P14060 373 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 HSD3B2P26439 372 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 BEX3Q00994 111 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 RPA4Q13156 261 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 ATXN7L2Q5T6C5 722 aaPredicted RBP15.98■□□□□ 0.15
LITAF-209ENST00000571688 GATAD2BQ8WXI9 593 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 CXorf40BQ96DE9 158 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 ZNF578Q96N58 590 aaPredicted RBP15.98■□□□□ 0.15
LITAF-209ENST00000571688 ZNF582Q96NG8 517 aaPredicted RBP15.98■□□□□ 0.15
LITAF-209ENST00000571688 WRAP53Q9BUR4 548 aaKnown RBP15.98■□□□□ 0.15
LITAF-209ENST00000571688 POLR2J3Q9H1A7 115 aaKnown RBP15.98■□□□□ 0.15
LITAF-209ENST00000571688 FKBP7Q9Y680 259 aa15.98■□□□□ 0.15
LITAF-209ENST00000571688 DNAH12Q6ZR08 3092 aa15.97■□□□□ 0.15
LITAF-209ENST00000571688 PIPSLA2A3N6 862 aa15.97■□□□□ 0.15
LITAF-209ENST00000571688 DHFRP00374 187 aa15.97■□□□□ 0.15
LITAF-209ENST00000571688 GAAP10253 952 aa15.97■□□□□ 0.15
LITAF-209ENST00000571688 CCDC85BQ15834 202 aaPredicted RBP15.97■□□□□ 0.15
LITAF-209ENST00000571688 CDKN3Q16667 212 aa15.97■□□□□ 0.15
LITAF-209ENST00000571688 XKR6Q5GH73 641 aa15.97■□□□□ 0.15
LITAF-209ENST00000571688 DCST1Q5T197 706 aa15.97■□□□□ 0.15
LITAF-209ENST00000571688 PGBD2Q6P3X8 592 aa15.97■□□□□ 0.15
LITAF-209ENST00000571688 UNC5DQ6UXZ4 953 aa15.97■□□□□ 0.15
LITAF-209ENST00000571688 IQCF1Q8N6M8 205 aa15.97■□□□□ 0.15
LITAF-209ENST00000571688 PCNPQ8WW12 178 aaKnown RBP15.97■□□□□ 0.15
LITAF-209ENST00000571688 FGF11Q92914 225 aa15.97■□□□□ 0.15
LITAF-209ENST00000571688 HGDQ93099 445 aa15.97■□□□□ 0.15
LITAF-209ENST00000571688 BRF2Q9HAW0 419 aa15.97■□□□□ 0.15
LITAF-209ENST00000571688 MAP4K5Q9Y4K4 846 aa15.97■□□□□ 0.15
LITAF-209ENST00000571688 SHISA3A0PJX4 238 aa15.97■□□□□ 0.15
LITAF-209ENST00000571688 FAAHO00519 579 aa15.97■□□□□ 0.15
LITAF-209ENST00000571688 SLC19A2O60779 497 aa15.97■□□□□ 0.15
LITAF-209ENST00000571688 PAHP00439 452 aa15.97■□□□□ 0.15
LITAF-209ENST00000571688 ZDHHC11BP0C7U3 371 aa15.97■□□□□ 0.15
LITAF-209ENST00000571688 CFL1P23528 166 aaKnown RBP15.97■□□□□ 0.15
LITAF-209ENST00000571688 BTCP35070 178 aa15.97■□□□□ 0.15
LITAF-209ENST00000571688 SPAM1P38567 509 aa15.97■□□□□ 0.15
LITAF-209ENST00000571688 NNMTP40261 264 aa15.97■□□□□ 0.15
LITAF-209ENST00000571688 HSF2Q03933 536 aa15.97■□□□□ 0.15
LITAF-209ENST00000571688 DUSP6Q16828 381 aa15.97■□□□□ 0.15
LITAF-209ENST00000571688 LGALSLQ3ZCW2 172 aaPredicted RBP15.97■□□□□ 0.15
LITAF-209ENST00000571688 GARNL3Q5VVW2 1013 aa15.97■□□□□ 0.15
LITAF-209ENST00000571688 CD276Q5ZPR3 534 aa15.97■□□□□ 0.15
LITAF-209ENST00000571688 DENND1CQ8IV53 801 aa15.97■□□□□ 0.15
LITAF-209ENST00000571688 SLC16A10Q8TF71 515 aa15.97■□□□□ 0.15
LITAF-209ENST00000571688 SKA2Q8WVK7 121 aaPredicted RBP15.97■□□□□ 0.15
LITAF-209ENST00000571688 RBP7Q96R05 134 aa15.97■□□□□ 0.15
LITAF-209ENST00000571688 TMEM121BQ9BXQ6 578 aaPredicted RBP15.97■□□□□ 0.15
LITAF-209ENST00000571688 FGF20Q9NP95 211 aaPredicted RBP15.97■□□□□ 0.15
LITAF-209ENST00000571688 MRPS18AQ9NVS2 196 aaKnown RBP15.97■□□□□ 0.15
LITAF-209ENST00000571688 TAS2R7Q9NYW3 318 aa15.97■□□□□ 0.15
LITAF-209ENST00000571688 SCML1Q9UN30 329 aa15.97■□□□□ 0.15
LITAF-209ENST00000571688 A0A1B0GVM2 712 aa15.96■□□□□ 0.15
LITAF-209ENST00000571688 AGAP14A8MT82 685 aa15.96■□□□□ 0.15
LITAF-209ENST00000571688 LANCL1O43813 399 aa15.96■□□□□ 0.15
LITAF-209ENST00000571688 LZTS3O60299 673 aaPredicted RBP15.96■□□□□ 0.15
LITAF-209ENST00000571688 SEMA7AO75326 666 aa15.96■□□□□ 0.15
LITAF-209ENST00000571688 SH3BGRLO75368 114 aa15.96■□□□□ 0.15
LITAF-209ENST00000571688 SERPINI2O75830 405 aa15.96■□□□□ 0.15
LITAF-209ENST00000571688 OR56A5P0C7T3 313 aa15.96■□□□□ 0.15
LITAF-209ENST00000571688 TIA1P31483 386 aaKnown RBP eCLIP15.96■□□□□ 0.153e-10■■□□□ 11.7
LITAF-209ENST00000571688 SLC11A2P49281 568 aa15.96■□□□□ 0.15
LITAF-209ENST00000571688 EPHA5P54756 1037 aa15.96■□□□□ 0.15
LITAF-209ENST00000571688 RHOAP61586 193 aa15.96■□□□□ 0.15
LITAF-209ENST00000571688 DOC2AQ14183 400 aa15.96■□□□□ 0.15
LITAF-209ENST00000571688 SLC5A12Q1EHB4 618 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms