RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 ATP6AP2A0A1C7CYW4 349 aa14.09□□□□□ -0.15
RAB40B-203ENST00000570676 SERTM1A2A2V5 107 aa14.09□□□□□ -0.15
RAB40B-203ENST00000570676 ASPDHA6ND91 283 aa14.09□□□□□ -0.15
RAB40B-203ENST00000570676 SDHDO14521 159 aa14.09□□□□□ -0.15
RAB40B-203ENST00000570676 SH3BGRLO75368 114 aa14.09□□□□□ -0.15
RAB40B-203ENST00000570676 ATP6AP2O75787 350 aa14.09□□□□□ -0.15
RAB40B-203ENST00000570676 WISP2O76076 250 aa14.09□□□□□ -0.15
RAB40B-203ENST00000570676 TGFB1P01137 390 aa14.09□□□□□ -0.15
RAB40B-203ENST00000570676 HSD3B1P14060 373 aa14.09□□□□□ -0.15
RAB40B-203ENST00000570676 PTX3P26022 381 aaPredicted RBP14.09□□□□□ -0.15
RAB40B-203ENST00000570676 HSD3B2P26439 372 aa14.09□□□□□ -0.15
RAB40B-203ENST00000570676 COL8A1P27658 744 aa14.09□□□□□ -0.15
RAB40B-203ENST00000570676 TPP2P29144 1249 aaPredicted RBP14.09□□□□□ -0.15
RAB40B-203ENST00000570676 IDH3AP50213 366 aa14.09□□□□□ -0.15
RAB40B-203ENST00000570676 PLA2G16P53816 162 aa14.09□□□□□ -0.15
RAB40B-203ENST00000570676 MLF1P58340 268 aa14.09□□□□□ -0.15
RAB40B-203ENST00000570676 HMGCS1Q01581 520 aa14.09□□□□□ -0.15
RAB40B-203ENST00000570676 TERF2Q15554 542 aa14.09□□□□□ -0.15
RAB40B-203ENST00000570676 SLC9B1Q4ZJI4 515 aa14.09□□□□□ -0.15
RAB40B-203ENST00000570676 XKR7Q5GH72 579 aa14.09□□□□□ -0.15
RAB40B-203ENST00000570676 ZNF468Q5VIY5 522 aaPredicted RBP14.09□□□□□ -0.15
RAB40B-203ENST00000570676 C1QL3Q5VWW1 255 aa14.09□□□□□ -0.15
RAB40B-203ENST00000570676 SPINK14Q6IE38 97 aa14.09□□□□□ -0.15
RAB40B-203ENST00000570676 TRIM40Q6P9F5 258 aa14.09□□□□□ -0.15
RAB40B-203ENST00000570676 ABHD17CQ6PCB6 329 aa14.09□□□□□ -0.15
RAB40B-203ENST00000570676 SPATA21Q7Z572 469 aa14.09□□□□□ -0.15
RAB40B-203ENST00000570676 RPS19BP1Q86WX3 136 aaKnown RBP14.09□□□□□ -0.15
RAB40B-203ENST00000570676 ARMC10Q8N2F6 343 aa14.09□□□□□ -0.15
RAB40B-203ENST00000570676 FAM47BQ8NA70 645 aa14.09□□□□□ -0.15
RAB40B-203ENST00000570676 OR2T11Q8NH01 316 aa14.09□□□□□ -0.15
RAB40B-203ENST00000570676 ADAMTS18Q8TE60 1221 aa14.09□□□□□ -0.15
RAB40B-203ENST00000570676 CMTM7Q96FZ5 175 aa14.09□□□□□ -0.15
RAB40B-203ENST00000570676 SERPINI1Q99574 410 aa14.09□□□□□ -0.15
RAB40B-203ENST00000570676 MS4A8Q9BY19 250 aa14.09□□□□□ -0.15
RAB40B-203ENST00000570676 REXO4Q9GZR2 422 aaKnown RBP14.09□□□□□ -0.15
RAB40B-203ENST00000570676 CDCP1Q9H5V8 836 aa14.09□□□□□ -0.15
RAB40B-203ENST00000570676 WDR55Q9H6Y2 383 aaPredicted RBP14.09□□□□□ -0.15
RAB40B-203ENST00000570676 ZNF223Q9UK11 482 aaPredicted RBP14.09□□□□□ -0.15
RAB40B-203ENST00000570676 A0A088AWK7 358 aa14.08□□□□□ -0.16
RAB40B-203ENST00000570676 GOLGA8QA0A0J9YX86 632 aa14.08□□□□□ -0.16
RAB40B-203ENST00000570676 GOLGA8OA6NCC3 632 aa14.08□□□□□ -0.16
RAB40B-203ENST00000570676 A8MUA0 341 aa14.08□□□□□ -0.16
RAB40B-203ENST00000570676 GOLGA8NF8WBI6 632 aa14.08□□□□□ -0.16
RAB40B-203ENST00000570676 B3GALT2O43825 422 aa14.08□□□□□ -0.16
RAB40B-203ENST00000570676 UNC5CO95185 931 aa14.08□□□□□ -0.16
RAB40B-203ENST00000570676 ETHE1O95571 254 aa14.08□□□□□ -0.16
RAB40B-203ENST00000570676 FAM107AO95990 144 aa14.08□□□□□ -0.16
RAB40B-203ENST00000570676 ZNF10P21506 573 aaPredicted RBP14.08□□□□□ -0.16
RAB40B-203ENST00000570676 EPHA3P29320 983 aa14.08□□□□□ -0.16
RAB40B-203ENST00000570676 PPP2R1BP30154 601 aa14.08□□□□□ -0.16
RAB40B-203ENST00000570676 ARFIP2P53365 341 aa14.08□□□□□ -0.16
RAB40B-203ENST00000570676 LIM2P55344 173 aa14.08□□□□□ -0.16
RAB40B-203ENST00000570676 PER3P56645 1201 aa14.08□□□□□ -0.16
RAB40B-203ENST00000570676 HSD17B7P56937 341 aa14.08□□□□□ -0.16
RAB40B-203ENST00000570676 SPDYAQ5MJ70 313 aa14.08□□□□□ -0.16
RAB40B-203ENST00000570676 GFRALQ6UXV0 394 aa14.08□□□□□ -0.16
RAB40B-203ENST00000570676 ZNF793Q6ZN11 406 aa14.08□□□□□ -0.16
RAB40B-203ENST00000570676 Q6ZSR9 355 aa14.08□□□□□ -0.16
RAB40B-203ENST00000570676 CHSY3Q70JA7 882 aa14.08□□□□□ -0.16
RAB40B-203ENST00000570676 FJX1Q86VR8 437 aa14.08□□□□□ -0.16
RAB40B-203ENST00000570676 ZNF227Q86WZ6 799 aa14.08□□□□□ -0.16
RAB40B-203ENST00000570676 B3GNT7Q8NFL0 401 aa14.08□□□□□ -0.16
RAB40B-203ENST00000570676 RELTQ969Z4 430 aa14.08□□□□□ -0.16
RAB40B-203ENST00000570676 TUBGCP3Q96CW5 907 aa14.08□□□□□ -0.16
RAB40B-203ENST00000570676 FRMD6Q96NE9 622 aa14.08□□□□□ -0.16
RAB40B-203ENST00000570676 F2RL3Q96RI0 385 aa14.08□□□□□ -0.16
RAB40B-203ENST00000570676 SERINC2Q96SA4 455 aa14.08□□□□□ -0.16
RAB40B-203ENST00000570676 EBF4Q9BQW3 602 aa14.08□□□□□ -0.16
RAB40B-203ENST00000570676 TMEM120AQ9BXJ8 343 aa14.08□□□□□ -0.16
RAB40B-203ENST00000570676 OR51B5Q9H339 312 aa14.08□□□□□ -0.16
RAB40B-203ENST00000570676 TRIM45Q9H8W5 580 aaPredicted RBP14.08□□□□□ -0.16
RAB40B-203ENST00000570676 PRDM7Q9NQW5 492 aa14.08□□□□□ -0.16
RAB40B-203ENST00000570676 KLHL1Q9NR64 748 aa14.08□□□□□ -0.16
RAB40B-203ENST00000570676 PRTFDC1Q9NRG1 225 aa14.08□□□□□ -0.16
RAB40B-203ENST00000570676 NMRK1Q9NWW6 199 aa14.08□□□□□ -0.16
RAB40B-203ENST00000570676 PSD3Q9NYI0 1048 aa14.08□□□□□ -0.16
RAB40B-203ENST00000570676 VPS29Q9UBQ0 182 aa14.08□□□□□ -0.16
RAB40B-203ENST00000570676 PPT2Q9UMR5 302 aa14.08□□□□□ -0.16
RAB40B-203ENST00000570676 DAPP1Q9UN19 280 aa14.08□□□□□ -0.16
RAB40B-203ENST00000570676 PPIEQ9UNP9 301 aaKnown RBP14.08□□□□□ -0.16
RAB40B-203ENST00000570676 CCL27Q9Y4X3 112 aa14.08□□□□□ -0.16
RAB40B-203ENST00000570676 UNC79Q9P2D8 2635 aa14.08□□□□□ -0.16
RAB40B-203ENST00000570676 NCOA6Q14686 2063 aaPredicted RBP14.07□□□□□ -0.16
RAB40B-203ENST00000570676 CYR61O00622 381 aa14.07□□□□□ -0.16
RAB40B-203ENST00000570676 SNX3O60493 162 aa14.07□□□□□ -0.16
RAB40B-203ENST00000570676 ZG16O60844 167 aa14.07□□□□□ -0.16
RAB40B-203ENST00000570676 PEX11AO75192 247 aa14.07□□□□□ -0.16
RAB40B-203ENST00000570676 RSL1D1O76021 490 aaKnown RBP14.07□□□□□ -0.16
RAB40B-203ENST00000570676 MYO1DO94832 1006 aa14.07□□□□□ -0.16
RAB40B-203ENST00000570676 TRHRP34981 398 aaPredicted RBP14.07□□□□□ -0.16
RAB40B-203ENST00000570676 DCTP40126 519 aa14.07□□□□□ -0.16
RAB40B-203ENST00000570676 GPR143P51810 404 aa14.07□□□□□ -0.16
RAB40B-203ENST00000570676 MTTPP55157 894 aa14.07□□□□□ -0.16
RAB40B-203ENST00000570676 OC90Q02509 493 aaPredicted RBP14.07□□□□□ -0.16
RAB40B-203ENST00000570676 CUL3Q13618 768 aa14.07□□□□□ -0.16
RAB40B-203ENST00000570676 ATP6AP1LQ52LC2 224 aa14.07□□□□□ -0.16
RAB40B-203ENST00000570676 TMEM35AQ53FP2 167 aa14.07□□□□□ -0.16
RAB40B-203ENST00000570676 DEPDC1Q5TB30 811 aa14.07□□□□□ -0.16
RAB40B-203ENST00000570676 KHDRBS2Q5VWX1 349 aaKnown RBP14.07□□□□□ -0.16
RAB40B-203ENST00000570676 ZNF787Q6DD87 383 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms