RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 TEX51A0A1B0GUA7 166 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 PRSS51A0A1B0GVH4 220 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 A0A1W2PP18 115 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 A0A1W2PRB8 838 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 ERICH4A6NGS2 130 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 GABRR3A8MPY1 467 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 CAPN14A8MX76 684 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 IDSB3KWA1 339 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 C21orf140B9A014 251 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 FAM227AF5H4B4 570 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 RNASET2O00584 256 aaKnown RBP6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 CYR61O00622 381 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 AIM2O14862 343 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 ATXN7O15265 892 aaPredicted RBP6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 FGF17O60258 216 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 BRINP1O60477 761 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 TBX19O60806 448 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 CTNSO60931 367 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 JRKO75564 520 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 ATP5HO75947 161 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 SLITRK5O94991 958 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 CBX6O95503 412 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 CPSF4O95639 269 aaKnown RBP6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 GPR75O95800 540 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 C6orf47O95873 294 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 ZGLP1P0C6A0 271 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 C8orf89P0DMQ9 161 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 LIPCP11150 499 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 LAMP1P11279 417 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 CPMP14384 443 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 PORP16435 677 aaPredicted RBP6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 TNNI3P19429 210 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 TCN2P20062 427 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 MAOAP21397 527 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 NT5EP21589 574 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 IL12AP29459 219 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 CHI3L1P36222 383 aaPredicted RBP6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 FEN1P39748 380 aaKnown RBP6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 STAT5AP42229 794 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 CPA2P48052 419 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 ANXA11P50995 505 aaKnown RBP6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 XKP51811 444 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 PCBP4P57723 403 aaKnown RBP6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 SNRPNP63162 240 aaKnown RBP6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 PRR5P85299 388 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 NSDHLQ15738 373 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 TRMT5Q32P41 509 aaKnown RBP6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 ZNF385BQ569K4 471 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 VWA2Q5GFL6 755 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 ZNF385CQ66K41 422 aaPredicted RBP6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 FAAH2Q6GMR7 532 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 BHLHB9Q6PI77 547 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 IGF2-ASQ6U949 168 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 C16orf89Q6UX73 402 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 SHISA6Q6ZSJ9 500 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 COX15Q7KZN9 410 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 OVCH1Q7RTY7 1134 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 ARPINQ7Z6K5 226 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 ANKRD46Q86W74 232 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 MARCH9Q86YJ5 346 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 TREML1Q86YW5 311 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 SCUBE1Q8IWY4 988 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 OR4N5Q8IXE1 308 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 GALNT12Q8IXK2 581 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 VWA5B2Q8N398 1253 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 ENDOVQ8N8Q3 282 aaKnown RBP6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 SLC38A9Q8NBW4 561 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 DNAJB14Q8TBM8 379 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 CT55Q8WUE5 264 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 OR5P2Q8WZ92 322 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 CIDECQ96AQ7 238 aaPredicted RBP6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 MOAP1Q96BY2 351 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 ROPN1LQ96C74 230 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 RBM18Q96H35 190 aaKnown RBP6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 NSL1Q96IY1 281 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 ART5Q96L15 291 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 TEX37Q96LM6 180 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 ZNF578Q96N58 590 aaPredicted RBP6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 CCDC115Q96NT0 180 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 SLC46A1Q96NT5 459 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 TGIF2Q9GZN2 237 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 SLC26A1Q9H2B4 701 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 GPN2Q9H9Y4 310 aaPredicted RBP6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 EFCAB1Q9HAE3 211 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 ACSS1Q9NUB1 689 aaPredicted RBP6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 DDX18Q9NVP1 670 aaKnown RBP6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 KCMF1Q9P0J7 381 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 COPS7AQ9UBW8 275 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 BTNL2Q9UIR0 455 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 C3orf18Q9UK00 162 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 KCND3Q9UK17 655 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 CROTQ9UKG9 612 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 KLK13Q9UKR3 277 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 CORO2BQ9UQ03 480 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 PTRH2Q9Y3E5 179 aaKnown RBP6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 ADAMTS20P59510 1910 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 VPS13AQ96RL7 3174 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 IGLV3-12A0A075B6K2 115 aa6.17□□□□□ -1.42
CTDNEP1-204ENST00000570484 A0A096LPI6 279 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms