RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 PCDH1Q08174 1060 aa12.13□□□□□ -0.47
SPG7-221ENST00000569720 ASPHQ12797 758 aa12.13□□□□□ -0.47
SPG7-221ENST00000569720 SLAMF1Q13291 335 aa12.13□□□□□ -0.47
SPG7-221ENST00000569720 DDX39BQ13838 428 aaKnown RBP12.13□□□□□ -0.47
SPG7-221ENST00000569720 HYAL4Q2M3T9 481 aa12.13□□□□□ -0.47
SPG7-221ENST00000569720 DEPDC1Q5TB30 811 aa12.13□□□□□ -0.47
SPG7-221ENST00000569720 SLC22A10Q63ZE4 541 aa12.13□□□□□ -0.47
SPG7-221ENST00000569720 GRHL2Q6ISB3 625 aa12.13□□□□□ -0.47
SPG7-221ENST00000569720 B3GNT6Q6ZMB0 384 aa12.13□□□□□ -0.47
SPG7-221ENST00000569720 TIFABQ6ZNK6 161 aa12.13□□□□□ -0.47
SPG7-221ENST00000569720 TRILQ7L0X0 811 aa12.13□□□□□ -0.47
SPG7-221ENST00000569720 ISCA2Q86U28 154 aa12.13□□□□□ -0.47
SPG7-221ENST00000569720 MYLK4Q86YV6 388 aaPredicted RBP12.13□□□□□ -0.47
SPG7-221ENST00000569720 OR4N5Q8IXE1 308 aa12.13□□□□□ -0.47
SPG7-221ENST00000569720 DND1Q8IYX4 353 aaKnown RBP12.13□□□□□ -0.47
SPG7-221ENST00000569720 CLYBLQ8N0X4 340 aa12.13□□□□□ -0.47
SPG7-221ENST00000569720 RPRMLQ8N4K4 120 aa12.13□□□□□ -0.47
SPG7-221ENST00000569720 SLC15A4Q8N697 577 aa12.13□□□□□ -0.47
SPG7-221ENST00000569720 UBTD2Q8WUN7 234 aa12.13□□□□□ -0.47
SPG7-221ENST00000569720 SARAFQ96BY9 339 aa12.13□□□□□ -0.47
SPG7-221ENST00000569720 ATOH8Q96SQ7 321 aa12.13□□□□□ -0.47
SPG7-221ENST00000569720 ZNF559Q9BR84 538 aa12.13□□□□□ -0.47
SPG7-221ENST00000569720 PELOQ9BRX2 385 aaKnown RBP12.13□□□□□ -0.47
SPG7-221ENST00000569720 OR51B5Q9H339 312 aa12.13□□□□□ -0.47
SPG7-221ENST00000569720 RYDENQ9NUL5 291 aaKnown RBP12.13□□□□□ -0.47
SPG7-221ENST00000569720 TUBA8Q9NY65 449 aaPredicted RBP12.13□□□□□ -0.47
SPG7-221ENST00000569720 SENP1Q9P0U3 644 aa12.13□□□□□ -0.47
SPG7-221ENST00000569720 UBXN8O00124 270 aa12.12□□□□□ -0.47
SPG7-221ENST00000569720 HCN1O60741 890 aa12.12□□□□□ -0.47
SPG7-221ENST00000569720 WDR1O75083 606 aa12.12□□□□□ -0.47
SPG7-221ENST00000569720 HOXD4P09016 255 aaPredicted RBP12.12□□□□□ -0.47
SPG7-221ENST00000569720 SLC35E2BP0CK96 405 aa12.12□□□□□ -0.47
SPG7-221ENST00000569720 CCL3P10147 92 aa12.12□□□□□ -0.47
SPG7-221ENST00000569720 ALOX15P16050 662 aaPredicted RBP12.12□□□□□ -0.47
SPG7-221ENST00000569720 PIK3CBP42338 1070 aa12.12□□□□□ -0.47
SPG7-221ENST00000569720 ZFP36L2P47974 494 aaKnown RBP12.12□□□□□ -0.47
SPG7-221ENST00000569720 NR0B1P51843 470 aaKnown RBP12.12□□□□□ -0.47
SPG7-221ENST00000569720 ARFIP1P53367 373 aa12.12□□□□□ -0.47
SPG7-221ENST00000569720 FAM83EQ2M2I3 478 aa12.12□□□□□ -0.47
SPG7-221ENST00000569720 WLSQ5T9L3 541 aa12.12□□□□□ -0.47
SPG7-221ENST00000569720 LIPJQ5W064 366 aa12.12□□□□□ -0.47
SPG7-221ENST00000569720 CES4AQ5XG92 561 aa12.12□□□□□ -0.47
SPG7-221ENST00000569720 SLC29A4Q7RTT9 530 aa12.12□□□□□ -0.47
SPG7-221ENST00000569720 CMC1Q7Z7K0 106 aa12.12□□□□□ -0.47
SPG7-221ENST00000569720 GPR180Q86V85 440 aa12.12□□□□□ -0.47
SPG7-221ENST00000569720 DMRTC2Q8IXT2 367 aaPredicted RBP12.12□□□□□ -0.47
SPG7-221ENST00000569720 ST13P4Q8IZP2 240 aaPredicted RBP12.12□□□□□ -0.47
SPG7-221ENST00000569720 TEX9Q8N6V9 391 aa12.12□□□□□ -0.47
SPG7-221ENST00000569720 HUS1BQ8NHY5 278 aa12.12□□□□□ -0.47
SPG7-221ENST00000569720 ACMSDQ8TDX5 336 aa12.12□□□□□ -0.47
SPG7-221ENST00000569720 REPS1Q96D71 796 aa12.12□□□□□ -0.47
SPG7-221ENST00000569720 PGM2Q96G03 612 aa12.12□□□□□ -0.47
SPG7-221ENST00000569720 FBXL20Q96IG2 436 aa12.12□□□□□ -0.47
SPG7-221ENST00000569720 PAFAH2Q99487 392 aa12.12□□□□□ -0.47
SPG7-221ENST00000569720 TTYH2Q9BSA4 534 aa12.12□□□□□ -0.47
SPG7-221ENST00000569720 NPDC1Q9NQX5 325 aaPredicted RBP12.12□□□□□ -0.47
SPG7-221ENST00000569720 LYARQ9NX58 379 aaKnown RBP12.12□□□□□ -0.47
SPG7-221ENST00000569720 KCNN3Q9UGI6 736 aa12.12□□□□□ -0.47
SPG7-221ENST00000569720 LGALS13Q9UHV8 139 aa12.12□□□□□ -0.47
SPG7-221ENST00000569720 BOKQ9UMX3 212 aaPredicted RBP12.12□□□□□ -0.47
SPG7-221ENST00000569720 ACOT9Q9Y305 439 aa12.12□□□□□ -0.47
SPG7-221ENST00000569720 ATG4BQ9Y4P1 393 aa12.12□□□□□ -0.47
SPG7-221ENST00000569720 PCDHGA11Q9Y5H2 935 aa12.12□□□□□ -0.47
SPG7-221ENST00000569720 LIPGQ9Y5X9 500 aa12.12□□□□□ -0.47
SPG7-221ENST00000569720 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.12□□□□□ -0.47
SPG7-221ENST00000569720 NINQ8N4C6 2090 aa12.12□□□□□ -0.47
SPG7-221ENST00000569720 A0A087X1B8 175 aa12.11□□□□□ -0.47
SPG7-221ENST00000569720 FAM47E-STBD1D6RA91 191 aa12.11□□□□□ -0.47
SPG7-221ENST00000569720 OR10H2O60403 315 aa12.11□□□□□ -0.47
SPG7-221ENST00000569720 ZNF354AO60765 605 aaPredicted RBP12.11□□□□□ -0.47
SPG7-221ENST00000569720 IGKV3-11P04433 115 aa12.11□□□□□ -0.47
SPG7-221ENST00000569720 MYZAPP0CAP1 466 aa12.11□□□□□ -0.47
SPG7-221ENST00000569720 GFAPP14136 432 aa12.11□□□□□ -0.47
SPG7-221ENST00000569720 PTX3P26022 381 aaPredicted RBP12.11□□□□□ -0.47
SPG7-221ENST00000569720 SERPINB3P29508 390 aa12.11□□□□□ -0.47
SPG7-221ENST00000569720 KCNJ2P63252 427 aa12.11□□□□□ -0.47
SPG7-221ENST00000569720 TNFRSF17Q02223 184 aa12.11□□□□□ -0.47
SPG7-221ENST00000569720 FOLH1Q04609 750 aa12.11□□□□□ -0.47
SPG7-221ENST00000569720 FOXO1Q12778 655 aa12.11□□□□□ -0.47
SPG7-221ENST00000569720 DLG1Q12959 904 aa12.11□□□□□ -0.47
SPG7-221ENST00000569720 SPNS3Q6ZMD2 512 aa12.11□□□□□ -0.47
SPG7-221ENST00000569720 RNF111Q6ZNA4 994 aa12.11□□□□□ -0.47
SPG7-221ENST00000569720 C9orf40Q8IXQ3 194 aa12.11□□□□□ -0.47
SPG7-221ENST00000569720 ZCCHC7Q8N3Z6 543 aaKnown RBP12.11□□□□□ -0.47
SPG7-221ENST00000569720 GOLGA6L1Q8N7Z2 621 aa12.11□□□□□ -0.47
SPG7-221ENST00000569720 RHEBL1Q8TAI7 183 aa12.11□□□□□ -0.47
SPG7-221ENST00000569720 ISL2Q96A47 359 aa12.11□□□□□ -0.47
SPG7-221ENST00000569720 PPWD1Q96BP3 646 aaKnown RBP12.11□□□□□ -0.47
SPG7-221ENST00000569720 SPACA9Q96E40 222 aaPredicted RBP12.11□□□□□ -0.47
SPG7-221ENST00000569720 MTERF1Q99551 399 aaKnown RBP12.11□□□□□ -0.47
SPG7-221ENST00000569720 CNPPD1Q9BV87 410 aa12.11□□□□□ -0.47
SPG7-221ENST00000569720 SORBS1Q9BX66 1292 aaKnown RBP12.11□□□□□ -0.47
SPG7-221ENST00000569720 ACTR8Q9H981 624 aa12.11□□□□□ -0.47
SPG7-221ENST00000569720 WDR41Q9HAD4 459 aa12.11□□□□□ -0.47
SPG7-221ENST00000569720 DMRT3Q9NQL9 472 aa12.11□□□□□ -0.47
SPG7-221ENST00000569720 IGSF5Q9NSI5 407 aa12.11□□□□□ -0.47
SPG7-221ENST00000569720 ALKBH4Q9NXW9 302 aa12.11□□□□□ -0.47
SPG7-221ENST00000569720 CNIH4Q9P003 139 aa12.11□□□□□ -0.47
SPG7-221ENST00000569720 TSC22D4Q9Y3Q8 395 aa12.11□□□□□ -0.47
SPG7-221ENST00000569720 SPG11Q96JI7 2443 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms