RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 LINC01356Q8N9X3 169 aa5.38□□□□□ -1.55
CDH13-212ENST00000569144 MAPK1IP1LQ8NDC0 245 aa5.38□□□□□ -1.55
CDH13-212ENST00000569144 MBD3L2Q8NHZ7 208 aaPredicted RBP5.38□□□□□ -1.55
CDH13-212ENST00000569144 SLC35G2Q8TBE7 412 aa5.38□□□□□ -1.55
CDH13-212ENST00000569144 SLC13A3Q8WWT9 602 aa5.38□□□□□ -1.55
CDH13-212ENST00000569144 NCLNQ969V3 563 aa5.38□□□□□ -1.55
CDH13-212ENST00000569144 SCYL1Q96KG9 808 aa5.38□□□□□ -1.55
CDH13-212ENST00000569144 ANP32EQ9BTT0 268 aa5.38□□□□□ -1.55
CDH13-212ENST00000569144 P2RY12Q9H244 342 aa5.38□□□□□ -1.55
CDH13-212ENST00000569144 SLC6A15Q9H2J7 730 aa5.38□□□□□ -1.55
CDH13-212ENST00000569144 CLK4Q9HAZ1 481 aaKnown RBP5.38□□□□□ -1.55
CDH13-212ENST00000569144 SEMA4BQ9NPR2 832 aaPredicted RBP5.38□□□□□ -1.55
CDH13-212ENST00000569144 NECTIN3Q9NQS3 549 aa5.38□□□□□ -1.55
CDH13-212ENST00000569144 ABCF3Q9NUQ8 709 aa5.38□□□□□ -1.55
CDH13-212ENST00000569144 PIH1D1Q9NWS0 290 aaKnown RBP5.38□□□□□ -1.55
CDH13-212ENST00000569144 SLC2A6Q9UGQ3 507 aa5.38□□□□□ -1.55
CDH13-212ENST00000569144 ANAPC5Q9UJX4 755 aa5.38□□□□□ -1.55
CDH13-212ENST00000569144 CDC42EP3Q9UKI2 254 aa5.38□□□□□ -1.55
CDH13-212ENST00000569144 CAPN11Q9UMQ6 739 aa5.38□□□□□ -1.55
CDH13-212ENST00000569144 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.38□□□□□ -1.55
CDH13-212ENST00000569144 ZNF407Q9C0G0 2248 aa5.38□□□□□ -1.55
CDH13-212ENST00000569144 SONP18583 2426 aaKnown RBP5.37□□□□□ -1.55
CDH13-212ENST00000569144 C15orf38-AP3S2A0A0A6YYH1 394 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 ESYT3A0FGR9 886 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 A8MV72 311 aaPredicted RBP5.37□□□□□ -1.55
CDH13-212ENST00000569144 PSMD12O00232 456 aaPredicted RBP5.37□□□□□ -1.55
CDH13-212ENST00000569144 WWP2O00308 870 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 SPOPO43791 374 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 LCMT2O60294 686 aaKnown RBP5.37□□□□□ -1.55
CDH13-212ENST00000569144 TRIM13O60858 407 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 ZNF189O75820 626 aaPredicted RBP5.37□□□□□ -1.55
CDH13-212ENST00000569144 RFPL3SP0C7P2 107 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 CCL3P10147 92 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 RBP3P10745 1247 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 KRT15P19012 456 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 CHRM3P20309 590 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 COMTP21964 271 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 CRYGSP22914 178 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 COILP38432 576 aaPredicted RBP5.37□□□□□ -1.55
CDH13-212ENST00000569144 CPA2P48052 419 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 NR1H2P55055 460 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 EIF3BP55884 814 aaKnown RBP5.37□□□□□ -1.55
CDH13-212ENST00000569144 ATP5J2P56134 94 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 PRAMEP78395 509 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 CRYZQ08257 329 aaKnown RBP5.37□□□□□ -1.55
CDH13-212ENST00000569144 VEZF1Q14119 521 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 RPS6KA1Q15418 735 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 SLC18A3Q16572 532 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 CLEC12BQ2HXU8 276 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 PARP6Q2NL67 630 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 DEFB134Q4QY38 66 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 TSTD2Q5T7W7 516 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 RNF187Q5TA31 235 aaPredicted RBP5.37□□□□□ -1.55
CDH13-212ENST00000569144 HECTD2Q5U5R9 776 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 CAPN13Q6MZZ7 669 aaPredicted RBP5.37□□□□□ -1.55
CDH13-212ENST00000569144 OPN5Q6U736 354 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 PLEKHM3Q6ZWE6 761 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 LUZP2Q86TE4 346 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 LDB1Q86U70 411 aaPredicted RBP5.37□□□□□ -1.55
CDH13-212ENST00000569144 VSTM4Q8IW00 320 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 RHOT2Q8IXI1 618 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 KATNAL2Q8IYT4 538 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 RCOR2Q8IZ40 523 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 LRRC25Q8N386 305 aaPredicted RBP5.37□□□□□ -1.55
CDH13-212ENST00000569144 RASGEF1CQ8N431 466 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 LINC00482Q8N8I6 264 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 MFSD9Q8NBP5 474 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 ZNF740Q8NDX6 193 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 PPHLN1Q8NEY8 458 aaKnown RBP5.37□□□□□ -1.55
CDH13-212ENST00000569144 ACTL9Q8TC94 416 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 TMEM171Q8WVE6 324 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 ROBO4Q8WZ75 1007 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 PEX13Q92968 403 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 PIK3IP1Q96FE7 263 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 PDLIM2Q96JY6 352 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 TIMP4Q99727 224 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 SFXN3Q9BWM7 321 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 REG4Q9BYZ8 158 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 CD244Q9BZW8 370 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 CXorf56Q9H5V9 222 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 LIN28AQ9H9Z2 209 aaKnown RBP5.37□□□□□ -1.55
CDH13-212ENST00000569144 ZNF226Q9NYT6 803 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 BOKQ9UMX3 212 aaPredicted RBP5.37□□□□□ -1.55
CDH13-212ENST00000569144 HYOU1Q9Y4L1 999 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 MMACHCQ9Y4U1 282 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 DNAJC13O75165 2243 aa5.37□□□□□ -1.55
CDH13-212ENST00000569144 MACROD2A1Z1Q3 448 aa5.36□□□□□ -1.55
CDH13-212ENST00000569144 SYNDIG1LA6NDD5 238 aa5.36□□□□□ -1.55
CDH13-212ENST00000569144 LRRC3CA6NJW4 275 aa5.36□□□□□ -1.55
CDH13-212ENST00000569144 GSTA4O15217 222 aa5.36□□□□□ -1.55
CDH13-212ENST00000569144 NDUFS4O43181 175 aa5.36□□□□□ -1.55
CDH13-212ENST00000569144 PSMD3O43242 534 aa5.36□□□□□ -1.55
CDH13-212ENST00000569144 CEP104O60308 925 aa5.36□□□□□ -1.55
CDH13-212ENST00000569144 AVILO75366 819 aa5.36□□□□□ -1.55
CDH13-212ENST00000569144 METTL18O95568 372 aa5.36□□□□□ -1.55
CDH13-212ENST00000569144 GAS8O95995 478 aa5.36□□□□□ -1.55
CDH13-212ENST00000569144 TPM3P06753 285 aa5.36□□□□□ -1.55
CDH13-212ENST00000569144 TMIGD3P0DMS9 266 aaPredicted RBP5.36□□□□□ -1.55
CDH13-212ENST00000569144 RNH1P13489 461 aaKnown RBP5.36□□□□□ -1.55
CDH13-212ENST00000569144 IMPA1P29218 277 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms