RNA–Protein interactions for RNA: ENST00000568740.5

TCF4-241, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-241ENST00000568740 CHAF1BQ13112 559 aa8.13□□□□□ -1.11
TCF4-241ENST00000568740 RPA4Q13156 261 aa8.13□□□□□ -1.11
TCF4-241ENST00000568740 GPR18Q14330 331 aa8.13□□□□□ -1.11
TCF4-241ENST00000568740 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.13□□□□□ -1.11
TCF4-241ENST00000568740 CCNYL2Q5T2Q4 361 aa8.13□□□□□ -1.11
TCF4-241ENST00000568740 CPTPQ5TA50 214 aa8.13□□□□□ -1.11
TCF4-241ENST00000568740 HACD2Q6Y1H2 254 aa8.13□□□□□ -1.11
TCF4-241ENST00000568740 USP30Q70CQ3 517 aa8.13□□□□□ -1.11
TCF4-241ENST00000568740 RAB11FIP2Q7L804 512 aa8.13□□□□□ -1.11
TCF4-241ENST00000568740 TAF8Q7Z7C8 310 aa8.13□□□□□ -1.11
TCF4-241ENST00000568740 TICAM1Q8IUC6 712 aa8.13□□□□□ -1.11
TCF4-241ENST00000568740 ADGRF3Q8IZF5 1079 aa8.13□□□□□ -1.11
TCF4-241ENST00000568740 HS3ST5Q8IZT8 346 aa8.13□□□□□ -1.11
TCF4-241ENST00000568740 CXorf40BQ96DE9 158 aa8.13□□□□□ -1.11
TCF4-241ENST00000568740 DGCR14Q96DF8 476 aaKnown RBP8.13□□□□□ -1.11
TCF4-241ENST00000568740 C11orf24Q96F05 449 aaPredicted RBP8.13□□□□□ -1.11
TCF4-241ENST00000568740 KLHL4Q9C0H6 718 aa8.13□□□□□ -1.11
TCF4-241ENST00000568740 EHD1Q9H4M9 534 aa8.13□□□□□ -1.11
TCF4-241ENST00000568740 TM9SF3Q9HD45 589 aa8.13□□□□□ -1.11
TCF4-241ENST00000568740 POLMQ9NP87 494 aaPredicted RBP8.13□□□□□ -1.11
TCF4-241ENST00000568740 MRPS30Q9NP92 439 aaKnown RBP8.13□□□□□ -1.11
TCF4-241ENST00000568740 TEX10Q9NXF1 929 aaPredicted RBP8.13□□□□□ -1.11
TCF4-241ENST00000568740 NPFFR2Q9Y5X5 522 aa8.13□□□□□ -1.11
TCF4-241ENST00000568740 DENND4AQ7Z401 1863 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 PRSS51A0A1B0GVH4 220 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 B4DGG1 531 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 GTPBP1O00178 669 aaKnown RBP8.12□□□□□ -1.11
TCF4-241ENST00000568740 NDUFS4O43181 175 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 ADAM20O43506 726 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 TMPRSS11DO60235 418 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 MYO1DO94832 1006 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 PRPS2P11908 318 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 CDH3P22223 829 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 TIA1P31483 386 aaKnown RBP eCLIP8.12□□□□□ -1.11
TCF4-241ENST00000568740 AKT2P31751 481 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 CCR8P51685 355 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 PRDX1Q06830 199 aaKnown RBP8.12□□□□□ -1.11
TCF4-241ENST00000568740 CSTF3Q12996 717 aaKnown RBP8.12□□□□□ -1.11
TCF4-241ENST00000568740 HABP2Q14520 560 aaPredicted RBP8.12□□□□□ -1.11
TCF4-241ENST00000568740 CYP2A13Q16696 494 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 PAGE2BQ5JRK9 111 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 OTUD3Q5T2D3 398 aaPredicted RBP8.12□□□□□ -1.11
TCF4-241ENST00000568740 TAGAPQ8N103 731 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 DPP10Q8N608 796 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 FAM46DQ8NEK8 389 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 OR8K5Q8NH50 307 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 C16orf78Q8WTQ4 265 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 DNASE1L2Q92874 299 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 EXOSC8Q96B26 276 aaKnown RBP8.12□□□□□ -1.11
TCF4-241ENST00000568740 EFCAB11Q9BUY7 163 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 SRMSQ9H3Y6 488 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 BRF2Q9HAW0 419 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 LTB4R2Q9NPC1 389 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 WSB2Q9NYS7 404 aaPredicted RBP8.12□□□□□ -1.11
TCF4-241ENST00000568740 RUVBL1Q9Y265 456 aaKnown RBP8.12□□□□□ -1.11
TCF4-241ENST00000568740 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.12□□□□□ -1.11
TCF4-241ENST00000568740 A0A1B0GTW7 788 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 TCRBV3S1A0A5B6 114 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 C7orf72A4D263 438 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 TMEM221A6NGB7 291 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 ZNF860A6NHJ4 632 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 PTGES3LE9PB15 166 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 CLIC1O00299 241 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 SOCS2O14508 198 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 HCRTR1O43613 425 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 UGDHO60701 494 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 OPN1SWP03999 348 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 WNT1P04628 370 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 HSD17B1P14061 328 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 TNFRSF1BP20333 461 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 PRPS1L1P21108 318 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 STARD6P59095 220 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 OLR1P78380 273 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 MTAPQ13126 283 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 MED21Q13503 144 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 FBXO43Q4G163 708 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 RUNDC3AQ59EK9 446 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 AADACL4Q5VUY2 407 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 TMEM214Q6NUQ4 689 aaKnown RBP8.12□□□□□ -1.11
TCF4-241ENST00000568740 LCTLQ6UWM7 567 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 AMIGO1Q86WK6 493 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 LAS2Q8IYD9 372 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 ADGRG5Q8IZF4 528 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 DENND6BQ8NEG7 585 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 OR1N1Q8NGS0 311 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 FAM131CQ96AQ9 280 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 NMD3Q96D46 503 aaKnown RBP8.12□□□□□ -1.11
TCF4-241ENST00000568740 CNBD2Q96M20 576 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 TEFMQ96QE5 360 aaKnown RBP8.12□□□□□ -1.11
TCF4-241ENST00000568740 TIMM29Q9BSF4 260 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 SLC6A16Q9GZN6 736 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 KAT8Q9H7Z6 458 aaKnown RBP8.12□□□□□ -1.11
TCF4-241ENST00000568740 LHX9Q9NQ69 397 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 SEMA3GQ9NS98 782 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 TMEM74BQ9NUR3 256 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 SPATA7Q9P0W8 599 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 FBXW2Q9UKT8 454 aa8.12□□□□□ -1.11
TCF4-241ENST00000568740 BDP1A6H8Y1 2624 aa8.11□□□□□ -1.11
TCF4-241ENST00000568740 GPR179Q6PRD1 2367 aa8.11□□□□□ -1.11
TCF4-241ENST00000568740 A8MV72 311 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms